RNA–Protein interactions for RNA: ENST00000580713.1

TOP3A-210, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 474 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-210ENST00000580713 HYAL1Q12794 435 aa12.57□□□□□ -0.4
TOP3A-210ENST00000580713 SMAD4Q13485 552 aaKnown RBP12.57□□□□□ -0.4
TOP3A-210ENST00000580713 USH1GQ495M9 461 aa12.57□□□□□ -0.4
TOP3A-210ENST00000580713 SKAP1Q86WV1 359 aa12.57□□□□□ -0.4
TOP3A-210ENST00000580713 SEPT8Q92599 483 aa12.57□□□□□ -0.4
TOP3A-210ENST00000580713 ATOH1Q92858 354 aaPredicted RBP12.57□□□□□ -0.4
TOP3A-210ENST00000580713 TOP1MTQ969P6 601 aa12.57□□□□□ -0.4
TOP3A-210ENST00000580713 IFIH1Q9BYX4 1025 aaKnown RBP12.57□□□□□ -0.4
TOP3A-210ENST00000580713 CD207Q9UJ71 328 aa12.57□□□□□ -0.4
TOP3A-210ENST00000580713 MICAL3Q7RTP6 2002 aa12.56□□□□□ -0.4
TOP3A-210ENST00000580713 CTC1Q2NKJ3 1217 aa12.56□□□□□ -0.4
TOP3A-210ENST00000580713 PLEKHG4Q58EX7 1191 aa12.56□□□□□ -0.4
TOP3A-210ENST00000580713 FBXL6Q8N531 539 aa12.56□□□□□ -0.4
TOP3A-210ENST00000580713 FIBCD1Q8N539 461 aa12.56□□□□□ -0.4
TOP3A-210ENST00000580713 GPATCH3Q96I76 525 aa12.56□□□□□ -0.4
TOP3A-210ENST00000580713 IRF2BPLQ9H1B7 796 aa12.56□□□□□ -0.4
TOP3A-210ENST00000580713 TOMM22Q9NS69 142 aa12.56□□□□□ -0.4
TOP3A-210ENST00000580713 TRIOO75962 3097 aa12.56□□□□□ -0.4
TOP3A-210ENST00000580713 GRM6O15303 877 aa12.55□□□□□ -0.4
TOP3A-210ENST00000580713 PDE4AP27815 886 aa12.55□□□□□ -0.4
TOP3A-210ENST00000580713 GTF2F1P35269 517 aaKnown RBP eCLIP12.55□□□□□ -0.4
TOP3A-210ENST00000580713 NDUFV1P49821 464 aa12.55□□□□□ -0.4
TOP3A-210ENST00000580713 ZXDAP98168 799 aa12.55□□□□□ -0.4
TOP3A-210ENST00000580713 STXBP2Q15833 593 aa12.55□□□□□ -0.4
TOP3A-210ENST00000580713 TSHZ3Q63HK5 1081 aa12.55□□□□□ -0.4
TOP3A-210ENST00000580713 IL17RAQ96F46 866 aa12.55□□□□□ -0.4
TOP3A-210ENST00000580713 TAAR1Q96RJ0 339 aa12.55□□□□□ -0.4
TOP3A-210ENST00000580713 SEC62Q99442 399 aaKnown RBP12.55□□□□□ -0.4
TOP3A-210ENST00000580713 C11orf84Q9BUA3 381 aaPredicted RBP12.55□□□□□ -0.4
TOP3A-210ENST00000580713 LMAN2LQ9H0V9 348 aa12.55□□□□□ -0.4
TOP3A-210ENST00000580713 TSHZ2Q9NRE2 1034 aa12.55□□□□□ -0.4
TOP3A-210ENST00000580713 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.55□□□□□ -0.4
TOP3A-210ENST00000580713 HAS3O00219 553 aa12.54□□□□□ -0.4
TOP3A-210ENST00000580713 LINC01565O15544 149 aa12.54□□□□□ -0.4
TOP3A-210ENST00000580713 SORBS3O60504 671 aa12.54□□□□□ -0.4
TOP3A-210ENST00000580713 TBX10O75333 385 aa12.54□□□□□ -0.4
TOP3A-210ENST00000580713 F2P00734 622 aa12.54□□□□□ -0.4
TOP3A-210ENST00000580713 RB1P06400 928 aa12.54□□□□□ -0.4
TOP3A-210ENST00000580713 CTSHP09668 335 aa12.54□□□□□ -0.4
TOP3A-210ENST00000580713 TOP1P11387 765 aaKnown RBP12.54□□□□□ -0.4
TOP3A-210ENST00000580713 LAMC2Q13753 1193 aa12.54□□□□□ -0.4
TOP3A-210ENST00000580713 RRP12Q5JTH9 1297 aaKnown RBP12.54□□□□□ -0.4
TOP3A-210ENST00000580713 EFCAB3Q8N7B9 438 aa12.54□□□□□ -0.4
TOP3A-210ENST00000580713 PPTC7Q8NI37 304 aa12.54□□□□□ -0.4
TOP3A-210ENST00000580713 NSUN6Q8TEA1 469 aaKnown RBP12.54□□□□□ -0.4
TOP3A-210ENST00000580713 ATP6V0A1Q93050 837 aa12.54□□□□□ -0.4
TOP3A-210ENST00000580713 TMEM47Q9BQJ4 181 aa12.54□□□□□ -0.4
TOP3A-210ENST00000580713 DDX41Q9UJV9 622 aaKnown RBP12.54□□□□□ -0.4
TOP3A-210ENST00000580713 MRVI1Q9Y6F6 885 aa12.54□□□□□ -0.4
TOP3A-210ENST00000580713 CFAP54Q96N23 3096 aa12.54□□□□□ -0.4
TOP3A-210ENST00000580713 WDR19Q8NEZ3 1342 aa12.54□□□□□ -0.4
TOP3A-210ENST00000580713 C17orf102A2RUQ5 167 aa12.53□□□□□ -0.4
TOP3A-210ENST00000580713 BMPR1AP36894 532 aa12.53□□□□□ -0.4
TOP3A-210ENST00000580713 HIC1Q14526 733 aa12.53□□□□□ -0.4
TOP3A-210ENST00000580713 ARHGEF16Q5VV41 709 aa12.53□□□□□ -0.4
TOP3A-210ENST00000580713 SERINC5Q86VE9 423 aa12.53□□□□□ -0.4
TOP3A-210ENST00000580713 RGS22Q8NE09 1264 aa12.53□□□□□ -0.4
TOP3A-210ENST00000580713 TBC1D5Q92609 795 aa12.53□□□□□ -0.4
TOP3A-210ENST00000580713 PPP2R3CQ969Q6 453 aa12.53□□□□□ -0.4
TOP3A-210ENST00000580713 IWS1Q96ST2 819 aa12.53□□□□□ -0.4
TOP3A-210ENST00000580713 RMDN3Q96TC7 470 aa12.53□□□□□ -0.4
TOP3A-210ENST00000580713 RWDD3Q9Y3V2 267 aa12.53□□□□□ -0.4
TOP3A-210ENST00000580713 CACNA1HO95180 2353 aa12.52□□□□□ -0.4
TOP3A-210ENST00000580713 C5orf42Q9H799 3197 aa12.52□□□□□ -0.41
TOP3A-210ENST00000580713 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.52□□□□□ -0.41
TOP3A-210ENST00000580713 H0Y858 1186 aa12.52□□□□□ -0.41
TOP3A-210ENST00000580713 PDHBP11177 359 aa12.52□□□□□ -0.41
TOP3A-210ENST00000580713 EIF2AK2P19525 551 aaKnown RBP12.52□□□□□ -0.41
TOP3A-210ENST00000580713 VCPP55072 806 aaKnown RBP12.52□□□□□ -0.41
TOP3A-210ENST00000580713 ADAM15Q13444 863 aa12.52□□□□□ -0.41
TOP3A-210ENST00000580713 SYTL5Q8TDW5 730 aaPredicted RBP12.52□□□□□ -0.41
TOP3A-210ENST00000580713 EMID1Q96A84 441 aaPredicted RBP12.52□□□□□ -0.41
TOP3A-210ENST00000580713 SPATA33Q96N06 139 aa12.52□□□□□ -0.41
TOP3A-210ENST00000580713 MFRPQ9BY79 579 aa12.52□□□□□ -0.41
TOP3A-210ENST00000580713 TLR9Q9NR96 1032 aa12.52□□□□□ -0.41
TOP3A-210ENST00000580713 USP34Q70CQ2 3546 aa12.52□□□□□ -0.41
TOP3A-210ENST00000580713 CACNA1AO00555 2505 aa12.52□□□□□ -0.41
TOP3A-210ENST00000580713 SPTBN4Q9H254 2564 aa12.51□□□□□ -0.41
TOP3A-210ENST00000580713 C5orf67F2Z3F1 127 aa12.51□□□□□ -0.41
TOP3A-210ENST00000580713 PPFIA4O75335 1185 aa12.51□□□□□ -0.41
TOP3A-210ENST00000580713 EIF3JO75822 258 aaKnown RBP12.51□□□□□ -0.41
TOP3A-210ENST00000580713 SEC24BO95487 1268 aa12.51□□□□□ -0.41
TOP3A-210ENST00000580713 AVPR2P30518 371 aa12.51□□□□□ -0.41
TOP3A-210ENST00000580713 NOVP48745 357 aa12.51□□□□□ -0.41
TOP3A-210ENST00000580713 ZNF543Q08ER8 600 aa12.51□□□□□ -0.41
TOP3A-210ENST00000580713 SIGLEC14Q08ET2 396 aa12.51□□□□□ -0.41
TOP3A-210ENST00000580713 APBB2Q92870 758 aa12.51□□□□□ -0.41
TOP3A-210ENST00000580713 RPGRIP1Q96KN7 1286 aa12.51□□□□□ -0.41
TOP3A-210ENST00000580713 FSD1Q9BTV5 496 aa12.51□□□□□ -0.41
TOP3A-210ENST00000580713 OSBPL7Q9BZF2 842 aa12.51□□□□□ -0.41
TOP3A-210ENST00000580713 ALG13Q9NP73 1137 aaKnown RBP12.51□□□□□ -0.41
TOP3A-210ENST00000580713 LOC730098B7Z3J9 87 aa12.5□□□□□ -0.41
TOP3A-210ENST00000580713 TREHO43280 583 aa12.5□□□□□ -0.41
TOP3A-210ENST00000580713 ORC4O43929 436 aa12.5□□□□□ -0.41
TOP3A-210ENST00000580713 KDM4AO75164 1064 aa12.5□□□□□ -0.41
TOP3A-210ENST00000580713 EYA4O95677 639 aa12.5□□□□□ -0.41
TOP3A-210ENST00000580713 NR3C2P08235 984 aa12.5□□□□□ -0.41
TOP3A-210ENST00000580713 BTG3Q14201 252 aaPredicted RBP12.5□□□□□ -0.41
TOP3A-210ENST00000580713 MCF2L2Q86YR7 1114 aa12.5□□□□□ -0.41
TOP3A-210ENST00000580713 PLEKHM2Q8IWE5 1019 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms