RNA–Protein interactions for RNA: ENST00000580556.5

CCDC84-209, Transcript of coiled-coil domain containing 84, humanhuman

TSL 3

Gene CCDC84, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-209ENST00000580556 ADAMTS4O75173 837 aa13.81□□□□□ -0.2
CCDC84-209ENST00000580556 TIMP1P01033 207 aa13.81□□□□□ -0.2
CCDC84-209ENST00000580556 CYP3A4P08684 503 aa13.81□□□□□ -0.2
CCDC84-209ENST00000580556 ZSCAN22P10073 491 aaPredicted RBP13.81□□□□□ -0.2
CCDC84-209ENST00000580556 TRAPPC10P48553 1259 aa13.81□□□□□ -0.2
CCDC84-209ENST00000580556 USP11P51784 963 aa13.81□□□□□ -0.2
CCDC84-209ENST00000580556 PGM5Q15124 567 aa13.81□□□□□ -0.2
CCDC84-209ENST00000580556 ANKRD33Q7Z3H0 272 aa13.81□□□□□ -0.2
CCDC84-209ENST00000580556 RNF180Q86T96 592 aa13.81□□□□□ -0.2
CCDC84-209ENST00000580556 VSIG10LQ86VR7 867 aa13.81□□□□□ -0.2
CCDC84-209ENST00000580556 TINF2Q9BSI4 451 aa13.81□□□□□ -0.2
CCDC84-209ENST00000580556 ZSCAN16Q9H4T2 348 aaPredicted RBP13.81□□□□□ -0.2
CCDC84-209ENST00000580556 TBX21Q9UL17 535 aa13.81□□□□□ -0.2
CCDC84-209ENST00000580556 MYADML2A6NDP7 307 aa13.8□□□□□ -0.2
CCDC84-209ENST00000580556 BRD1O95696 1058 aa13.8□□□□□ -0.2
CCDC84-209ENST00000580556 NR3C2P08235 984 aa13.8□□□□□ -0.2
CCDC84-209ENST00000580556 ZNF865P0CJ78 1059 aaPredicted RBP13.8□□□□□ -0.2
CCDC84-209ENST00000580556 CSF2RAP15509 400 aa13.8□□□□□ -0.2
CCDC84-209ENST00000580556 EIF2AK2P19525 551 aaKnown RBP13.8□□□□□ -0.2
CCDC84-209ENST00000580556 CCND2P30279 289 aa13.8□□□□□ -0.2
CCDC84-209ENST00000580556 NUCB2P80303 420 aa13.8□□□□□ -0.2
CCDC84-209ENST00000580556 ARHGAP4P98171 946 aa13.8□□□□□ -0.2
CCDC84-209ENST00000580556 TFF2Q03403 129 aa13.8□□□□□ -0.2
CCDC84-209ENST00000580556 RASIP1Q5U651 963 aa13.8□□□□□ -0.2
CCDC84-209ENST00000580556 MCTP1Q6DN14 999 aa13.8□□□□□ -0.2
CCDC84-209ENST00000580556 MOXD1Q6UVY6 613 aa13.8□□□□□ -0.2
CCDC84-209ENST00000580556 PIK3AP1Q6ZUJ8 805 aa13.8□□□□□ -0.2
CCDC84-209ENST00000580556 TBCKQ8TEA7 893 aa13.8□□□□□ -0.2
CCDC84-209ENST00000580556 PURBQ96QR8 312 aaKnown RBP13.8□□□□□ -0.2
CCDC84-209ENST00000580556 NAP1L4Q99733 375 aaKnown RBP13.8□□□□□ -0.2
CCDC84-209ENST00000580556 NKX2-4Q9H2Z4 354 aa13.8□□□□□ -0.2
CCDC84-209ENST00000580556 STARD7Q9NQZ5 370 aa13.8□□□□□ -0.2
CCDC84-209ENST00000580556 NRBP1Q9UHY1 535 aa13.8□□□□□ -0.2
CCDC84-209ENST00000580556 CYP3A7-CYP3A51PA0A087WV96 503 aa13.79□□□□□ -0.2
CCDC84-209ENST00000580556 DCDC2CA8MYV0 355 aa13.79□□□□□ -0.2
CCDC84-209ENST00000580556 EIF3JO75822 258 aaKnown RBP13.79□□□□□ -0.2
CCDC84-209ENST00000580556 BMP1P13497 986 aa13.79□□□□□ -0.2
CCDC84-209ENST00000580556 GCFC2P16383 781 aaKnown RBP13.79□□□□□ -0.2
CCDC84-209ENST00000580556 CYP3A7P24462 503 aa13.79□□□□□ -0.2
CCDC84-209ENST00000580556 CIITAP33076 1130 aa13.79□□□□□ -0.2
CCDC84-209ENST00000580556 ACLYP53396 1101 aa13.79□□□□□ -0.2
CCDC84-209ENST00000580556 RESTQ13127 1097 aa13.79□□□□□ -0.2
CCDC84-209ENST00000580556 ORC2Q13416 577 aaPredicted RBP13.79□□□□□ -0.2
CCDC84-209ENST00000580556 STXBP2Q15833 593 aa13.79□□□□□ -0.2
CCDC84-209ENST00000580556 RILPL1Q5EBL4 403 aa13.79□□□□□ -0.2
CCDC84-209ENST00000580556 EARS2Q5JPH6 523 aaKnown RBP13.79□□□□□ -0.2
CCDC84-209ENST00000580556 MFSD5Q6N075 450 aa13.79□□□□□ -0.2
CCDC84-209ENST00000580556 ZNF365Q70YC5 407 aa13.79□□□□□ -0.2
CCDC84-209ENST00000580556 ARMCX2Q7L311 632 aa13.79□□□□□ -0.2
CCDC84-209ENST00000580556 NIPA1Q7RTP0 329 aa13.79□□□□□ -0.2
CCDC84-209ENST00000580556 NEK8Q86SG6 692 aa13.79□□□□□ -0.2
CCDC84-209ENST00000580556 IL31RAQ8NI17 732 aa13.79□□□□□ -0.2
CCDC84-209ENST00000580556 PGBD1Q96JS3 809 aa13.79□□□□□ -0.2
CCDC84-209ENST00000580556 TOX2Q96NM4 488 aa13.79□□□□□ -0.2
CCDC84-209ENST00000580556 CXXC1Q9P0U4 656 aaPredicted RBP13.79□□□□□ -0.2
CCDC84-209ENST00000580556 YBX2Q9Y2T7 364 aaKnown RBP13.79□□□□□ -0.2
CCDC84-209ENST00000580556 CHD7Q9P2D1 2997 aa13.78□□□□□ -0.2
CCDC84-209ENST00000580556 KCNQ1P51787 676 aa13.78□□□□□ -0.2
CCDC84-209ENST00000580556 PDE4DQ08499 809 aa13.78□□□□□ -0.2
CCDC84-209ENST00000580556 PKP1Q13835 747 aa13.78□□□□□ -0.2
CCDC84-209ENST00000580556 INF2Q27J81 1249 aa13.78□□□□□ -0.2
CCDC84-209ENST00000580556 PPP4R3AQ6IN85 833 aa13.78□□□□□ -0.2
CCDC84-209ENST00000580556 MICALL1Q8N3F8 863 aa13.78□□□□□ -0.2
CCDC84-209ENST00000580556 MBOAT7Q96N66 472 aa13.78□□□□□ -0.2
CCDC84-209ENST00000580556 INPP4AQ96PE3 977 aaPredicted RBP13.78□□□□□ -0.2
CCDC84-209ENST00000580556 PPP1R12CQ9BZL4 782 aa13.78□□□□□ -0.2
CCDC84-209ENST00000580556 ABHD16BQ9H3Z7 469 aa13.78□□□□□ -0.2
CCDC84-209ENST00000580556 EPHX3Q9H6B9 360 aa13.78□□□□□ -0.2
CCDC84-209ENST00000580556 VTA1Q9NP79 307 aa13.78□□□□□ -0.2
CCDC84-209ENST00000580556 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.78□□□□□ -0.2
CCDC84-209ENST00000580556 NOL7Q9UMY1 257 aaKnown RBP13.78□□□□□ -0.2
CCDC84-209ENST00000580556 SYNRGQ9UMZ2 1314 aa13.78□□□□□ -0.2
CCDC84-209ENST00000580556 BDP1A6H8Y1 2624 aa13.77□□□□□ -0.2
CCDC84-209ENST00000580556 FAM205CA6NFA0 338 aa13.77□□□□□ -0.21
CCDC84-209ENST00000580556 F13A1P00488 732 aa13.77□□□□□ -0.21
CCDC84-209ENST00000580556 AKR1A1P14550 325 aa13.77□□□□□ -0.21
CCDC84-209ENST00000580556 MRPS9P82933 396 aaKnown RBP13.77□□□□□ -0.21
CCDC84-209ENST00000580556 SETQ01105 290 aaPredicted RBP13.77□□□□□ -0.21
CCDC84-209ENST00000580556 PPIGQ13427 754 aaKnown RBP eCLIP13.77□□□□□ -0.211e-7■■■■□ 20.2
CCDC84-209ENST00000580556 KCNA10Q16322 511 aa13.77□□□□□ -0.21
CCDC84-209ENST00000580556 GNPTABQ3T906 1256 aa13.77□□□□□ -0.21
CCDC84-209ENST00000580556 CEP55Q53EZ4 464 aa13.77□□□□□ -0.21
CCDC84-209ENST00000580556 CCSAPQ6IQ19 270 aaPredicted RBP13.77□□□□□ -0.21
CCDC84-209ENST00000580556 FERMT3Q86UX7 667 aa13.77□□□□□ -0.21
CCDC84-209ENST00000580556 KLHDC9Q8NEP7 349 aa13.77□□□□□ -0.21
CCDC84-209ENST00000580556 LRFN3Q9BTN0 628 aa13.77□□□□□ -0.21
CCDC84-209ENST00000580556 KATNBL1Q9H079 304 aa13.77□□□□□ -0.21
CCDC84-209ENST00000580556 CNPY2Q9Y2B0 182 aa13.77□□□□□ -0.21
CCDC84-209ENST00000580556 ZDHHC9Q9Y397 364 aa13.77□□□□□ -0.21
CCDC84-209ENST00000580556 UBIAD1Q9Y5Z9 338 aa13.77□□□□□ -0.21
CCDC84-209ENST00000580556 IGLV3-22A0A075B6J6 115 aa13.76□□□□□ -0.21
CCDC84-209ENST00000580556 MEIS1O00470 390 aa13.76□□□□□ -0.21
CCDC84-209ENST00000580556 MAFGO15525 162 aa13.76□□□□□ -0.21
CCDC84-209ENST00000580556 EDIL3O43854 480 aa13.76□□□□□ -0.21
CCDC84-209ENST00000580556 SNAI1O95863 264 aaPredicted RBP13.76□□□□□ -0.21
CCDC84-209ENST00000580556 MYCLP12524 364 aaPredicted RBP13.76□□□□□ -0.21
CCDC84-209ENST00000580556 CDK7P50613 346 aa13.76□□□□□ -0.21
CCDC84-209ENST00000580556 Q4G0T1 1027 aa13.76□□□□□ -0.21
CCDC84-209ENST00000580556 MYSM1Q5VVJ2 828 aa13.76□□□□□ -0.21
CCDC84-209ENST00000580556 GPRASP2Q96D09 838 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms