RNA–Protein interactions for RNA: ENST00000579662.5

ITGB4-206, Transcript of integrin subunit beta 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ITGB4, Length 5,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-206ENST00000579662 METTL23Q86XA0 190 aa16.52■□□□□ 0.24
ITGB4-206ENST00000579662 FOXO4P98177 505 aa16.52■□□□□ 0.24
ITGB4-206ENST00000579662 RNF207Q6ZRF8 634 aa16.52■□□□□ 0.24
ITGB4-206ENST00000579662 SDCCAG8Q86SQ7 713 aaPredicted RBP16.52■□□□□ 0.24
ITGB4-206ENST00000579662 ZNF653Q96CK0 615 aa16.52■□□□□ 0.24
ITGB4-206ENST00000579662 PANX2Q96RD6 677 aa16.52■□□□□ 0.24
ITGB4-206ENST00000579662 NUB1Q9Y5A7 615 aa16.52■□□□□ 0.24
ITGB4-206ENST00000579662 SERPING1P05155 500 aa16.52■□□□□ 0.23
ITGB4-206ENST00000579662 BSPRYQ5W0U4 402 aa16.52■□□□□ 0.23
ITGB4-206ENST00000579662 CCDC13Q8IYE1 715 aa16.52■□□□□ 0.23
ITGB4-206ENST00000579662 ARHGEF1Q92888 912 aaKnown RBP16.52■□□□□ 0.23
ITGB4-206ENST00000579662 RASSF4Q9H2L5 321 aa16.52■□□□□ 0.23
ITGB4-206ENST00000579662 MRPL47Q9HD33 250 aaKnown RBP16.52■□□□□ 0.23
ITGB4-206ENST00000579662 DCP1AQ9NPI6 582 aaPredicted RBP16.52■□□□□ 0.23
ITGB4-206ENST00000579662 CLTCQ00610 1675 aaKnown RBP16.52■□□□□ 0.23
ITGB4-206ENST00000579662 C21orf2O43822 256 aa16.52■□□□□ 0.23
ITGB4-206ENST00000579662 HSPA6P17066 643 aa16.52■□□□□ 0.23
ITGB4-206ENST00000579662 SLFN12LQ6IEE8 588 aa16.52■□□□□ 0.23
ITGB4-206ENST00000579662 ZNF148Q9UQR1 794 aa16.52■□□□□ 0.23
ITGB4-206ENST00000579662 PXDNLA1KZ92 1463 aa16.52■□□□□ 0.23
ITGB4-206ENST00000579662 ANKRD20A3Q5VUR7 823 aa16.51■□□□□ 0.23
ITGB4-206ENST00000579662 GIMAP8Q8ND71 665 aaPredicted RBP16.51■□□□□ 0.23
ITGB4-206ENST00000579662 CELF1Q92879 486 aaKnown RBP16.51■□□□□ 0.23
ITGB4-206ENST00000579662 AIFM3Q96NN9 605 aa16.51■□□□□ 0.23
ITGB4-206ENST00000579662 DPH5Q9H2P9 285 aa16.51■□□□□ 0.23
ITGB4-206ENST00000579662 SNX25Q9H3E2 840 aa16.51■□□□□ 0.23
ITGB4-206ENST00000579662 PNPLA7Q6ZV29 1317 aa16.51■□□□□ 0.23
ITGB4-206ENST00000579662 GTF2A1P52655 376 aaPredicted RBP16.51■□□□□ 0.23
ITGB4-206ENST00000579662 SLC35F6Q8N357 371 aa16.51■□□□□ 0.23
ITGB4-206ENST00000579662 EPSTI1Q96J88 318 aa16.51■□□□□ 0.23
ITGB4-206ENST00000579662 SUGT1Q9Y2Z0 365 aa16.51■□□□□ 0.23
ITGB4-206ENST00000579662 PPRC1Q5VV67 1664 aaKnown RBP16.51■□□□□ 0.23
ITGB4-206ENST00000579662 CLIC2O15247 247 aa16.51■□□□□ 0.23
ITGB4-206ENST00000579662 MAPK4P31152 587 aa16.51■□□□□ 0.23
ITGB4-206ENST00000579662 MXI1P50539 228 aa16.51■□□□□ 0.23
ITGB4-206ENST00000579662 MESDQ14696 234 aa16.51■□□□□ 0.23
ITGB4-206ENST00000579662 RASSF2P50749 326 aa16.51■□□□□ 0.23
ITGB4-206ENST00000579662 MTERF2Q49AM1 385 aa16.51■□□□□ 0.23
ITGB4-206ENST00000579662 UNC13DQ70J99 1090 aa16.51■□□□□ 0.23
ITGB4-206ENST00000579662 CYB5R4Q7L1T6 521 aa16.51■□□□□ 0.23
ITGB4-206ENST00000579662 C10orf67Q8IYJ2 551 aa16.51■□□□□ 0.23
ITGB4-206ENST00000579662 PPP4R1Q8TF05 950 aa16.51■□□□□ 0.23
ITGB4-206ENST00000579662 PYCARDQ9ULZ3 195 aa16.51■□□□□ 0.23
ITGB4-206ENST00000579662 ABCB11O95342 1321 aa16.51■□□□□ 0.23
ITGB4-206ENST00000579662 ZNF233A6NK53 670 aa16.51■□□□□ 0.23
ITGB4-206ENST00000579662 USP17L5A8MUK1 530 aa16.51■□□□□ 0.23
ITGB4-206ENST00000579662 COBLO75128 1261 aa16.51■□□□□ 0.23
ITGB4-206ENST00000579662 CYP2D6P10635 497 aa16.51■□□□□ 0.23
ITGB4-206ENST00000579662 PRPSAP1Q14558 356 aa16.51■□□□□ 0.23
ITGB4-206ENST00000579662 RC3H1Q5TC82 1133 aaKnown RBP16.51■□□□□ 0.23
ITGB4-206ENST00000579662 TCP11Q8WWU5 503 aa16.51■□□□□ 0.23
ITGB4-206ENST00000579662 LY9Q9HBG7 655 aa16.51■□□□□ 0.23
ITGB4-206ENST00000579662 PCDHA6Q9UN73 950 aa16.51■□□□□ 0.23
ITGB4-206ENST00000579662 PCDHA8Q9Y5H6 950 aa16.51■□□□□ 0.23
ITGB4-206ENST00000579662 RABL6Q3YEC7 729 aaPredicted RBP16.5■□□□□ 0.23
ITGB4-206ENST00000579662 TCP11X2Q5H9J9 407 aa16.5■□□□□ 0.23
ITGB4-206ENST00000579662 RCSD1Q6JBY9 416 aa16.5■□□□□ 0.23
ITGB4-206ENST00000579662 CFAP57Q96MR6 1250 aa16.5■□□□□ 0.23
ITGB4-206ENST00000579662 SP8Q8IXZ3 490 aa16.5■□□□□ 0.23
ITGB4-206ENST00000579662 PBKQ96KB5 322 aa16.5■□□□□ 0.23
ITGB4-206ENST00000579662 ATP8B3O60423 1300 aa16.5■□□□□ 0.23
ITGB4-206ENST00000579662 CCDC160A6NGH7 325 aa16.5■□□□□ 0.23
ITGB4-206ENST00000579662 GARSP41250 739 aaKnown RBP16.5■□□□□ 0.23
ITGB4-206ENST00000579662 MYO1EQ12965 1108 aa16.5■□□□□ 0.23
ITGB4-206ENST00000579662 PDXDC2PQ6P474 469 aa16.5■□□□□ 0.23
ITGB4-206ENST00000579662 GPATCH11Q8N954 259 aa16.5■□□□□ 0.23
ITGB4-206ENST00000579662 NDST4Q9H3R1 872 aa16.5■□□□□ 0.23
ITGB4-206ENST00000579662 PCIF1Q9H4Z3 704 aa16.5■□□□□ 0.23
ITGB4-206ENST00000579662 BCAP29Q9UHQ4 241 aa16.5■□□□□ 0.23
ITGB4-206ENST00000579662 HOXA13P31271 388 aaPredicted RBP16.5■□□□□ 0.23
ITGB4-206ENST00000579662 SPATS2Q86XZ4 545 aaKnown RBP16.5■□□□□ 0.23
ITGB4-206ENST00000579662 ABI1Q8IZP0 508 aa16.5■□□□□ 0.23
ITGB4-206ENST00000579662 NME8Q8N427 588 aa16.5■□□□□ 0.23
ITGB4-206ENST00000579662 ANKRD42Q8N9B4 389 aa16.5■□□□□ 0.23
ITGB4-206ENST00000579662 NEK9Q8TD19 979 aa16.5■□□□□ 0.23
ITGB4-206ENST00000579662 NLRP7Q8WX94 980 aa16.5■□□□□ 0.23
ITGB4-206ENST00000579662 FAM167AQ96KS9 214 aa16.5■□□□□ 0.23
ITGB4-206ENST00000579662 MXD3Q9BW11 206 aa16.5■□□□□ 0.23
ITGB4-206ENST00000579662 APOL6Q9BWW8 343 aa16.5■□□□□ 0.23
ITGB4-206ENST00000579662 SAMSN1Q9NSI8 373 aaKnown RBP16.5■□□□□ 0.23
ITGB4-206ENST00000579662 DIP2CQ9Y2E4 1556 aa16.49■□□□□ 0.23
ITGB4-206ENST00000579662 EIF2AK2P19525 551 aaKnown RBP16.49■□□□□ 0.23
ITGB4-206ENST00000579662 RFX6Q8HWS3 928 aa16.49■□□□□ 0.23
ITGB4-206ENST00000579662 ENAHQ8N8S7 591 aaPredicted RBP16.49■□□□□ 0.23
ITGB4-206ENST00000579662 CDKL2Q92772 493 aa16.49■□□□□ 0.23
ITGB4-206ENST00000579662 IPO11Q9UI26 975 aaKnown RBP16.49■□□□□ 0.23
ITGB4-206ENST00000579662 ATF5Q9Y2D1 282 aaPredicted RBP16.49■□□□□ 0.23
ITGB4-206ENST00000579662 JRKLQ9Y4A0 524 aa16.49■□□□□ 0.23
ITGB4-206ENST00000579662 ORC4O43929 436 aa16.49■□□□□ 0.23
ITGB4-206ENST00000579662 LDHAP00338 332 aaKnown RBP16.49■□□□□ 0.23
ITGB4-206ENST00000579662 FAM71BQ8TC56 605 aa16.49■□□□□ 0.23
ITGB4-206ENST00000579662 HOXC10Q9NYD6 342 aa16.49■□□□□ 0.23
ITGB4-206ENST00000579662 PODXL2Q9NZ53 605 aa16.49■□□□□ 0.23
ITGB4-206ENST00000579662 H7C0C1 242 aa16.49■□□□□ 0.23
ITGB4-206ENST00000579662 ATP5OP48047 213 aa16.49■□□□□ 0.23
ITGB4-206ENST00000579662 ANKRD13CQ8N6S4 541 aa16.49■□□□□ 0.23
ITGB4-206ENST00000579662 FAM20AQ96MK3 541 aa16.49■□□□□ 0.23
ITGB4-206ENST00000579662 PLEKHA4Q9H4M7 779 aa16.49■□□□□ 0.23
ITGB4-206ENST00000579662 NEXMIFQ5QGS0 1516 aa16.49■□□□□ 0.23
ITGB4-206ENST00000579662 PGRMC1O00264 195 aaKnown RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms