RNA–Protein interactions for RNA: ENST00000579221.5

SLC6A4-205, Transcript of solute carrier family 6 member 4, humanhuman

TSL 1 (best)

Gene SLC6A4, Length 1,069 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-205ENST00000579221 KPNA6O60684 536 aa17.63■□□□□ 0.41
SLC6A4-205ENST00000579221 PTGS1P23219 599 aa17.63■□□□□ 0.41
SLC6A4-205ENST00000579221 KCNA10Q16322 511 aa17.63■□□□□ 0.41
SLC6A4-205ENST00000579221 RILPL1Q5EBL4 403 aa17.63■□□□□ 0.41
SLC6A4-205ENST00000579221 TTC38Q5R3I4 469 aa17.63■□□□□ 0.41
SLC6A4-205ENST00000579221 PPTC7Q8NI37 304 aa17.63■□□□□ 0.41
SLC6A4-205ENST00000579221 AFG1LQ8WV93 481 aa17.63■□□□□ 0.41
SLC6A4-205ENST00000579221 LENG9Q96B70 501 aa17.63■□□□□ 0.41
SLC6A4-205ENST00000579221 FAM20AQ96MK3 541 aa17.63■□□□□ 0.41
SLC6A4-205ENST00000579221 BCAS3Q9H6U6 928 aa17.63■□□□□ 0.41
SLC6A4-205ENST00000579221 TSHZ2Q9NRE2 1034 aa17.63■□□□□ 0.41
SLC6A4-205ENST00000579221 LRRC37A2A6NM11 1700 aa17.62■□□□□ 0.41
SLC6A4-205ENST00000579221 A6NJR5 290 aa17.62■□□□□ 0.41
SLC6A4-205ENST00000579221 TBX3O15119 743 aa17.62■□□□□ 0.41
SLC6A4-205ENST00000579221 CTAGE5O15320 804 aa17.62■□□□□ 0.41
SLC6A4-205ENST00000579221 FARP2O94887 1054 aaPredicted RBP17.62■□□□□ 0.41
SLC6A4-205ENST00000579221 SOX10P56693 466 aa17.62■□□□□ 0.41
SLC6A4-205ENST00000579221 BEX3Q00994 111 aa17.62■□□□□ 0.41
SLC6A4-205ENST00000579221 ORC2Q13416 577 aaPredicted RBP17.62■□□□□ 0.41
SLC6A4-205ENST00000579221 ZNF174Q15697 407 aa17.62■□□□□ 0.41
SLC6A4-205ENST00000579221 FERMT3Q86UX7 667 aa17.62■□□□□ 0.41
SLC6A4-205ENST00000579221 RIT2Q99578 217 aa17.62■□□□□ 0.41
SLC6A4-205ENST00000579221 POLR3EQ9NVU0 708 aa17.62■□□□□ 0.41
SLC6A4-205ENST00000579221 SLC9A2Q9UBY0 812 aa17.62■□□□□ 0.41
SLC6A4-205ENST00000579221 TCEAL9Q9UHQ7 104 aa17.62■□□□□ 0.41
SLC6A4-205ENST00000579221 RBM19Q9Y4C8 960 aaKnown RBP17.62■□□□□ 0.41
SLC6A4-205ENST00000579221 MYADML2A6NDP7 307 aa17.61■□□□□ 0.41
SLC6A4-205ENST00000579221 MOXD2PA6NHM9 499 aa17.61■□□□□ 0.41
SLC6A4-205ENST00000579221 NOP56O00567 594 aaKnown RBP17.61■□□□□ 0.41
SLC6A4-205ENST00000579221 SLC37A4O43826 429 aa17.61■□□□□ 0.41
SLC6A4-205ENST00000579221 PPFIA4O75335 1185 aa17.61■□□□□ 0.41
SLC6A4-205ENST00000579221 MCM7P33993 719 aa17.61■□□□□ 0.41
SLC6A4-205ENST00000579221 IRX5P78411 483 aaPredicted RBP17.61■□□□□ 0.41
SLC6A4-205ENST00000579221 ITGB3BPQ13352 177 aaPredicted RBP17.61■□□□□ 0.41
SLC6A4-205ENST00000579221 DGKDQ16760 1214 aa17.61■□□□□ 0.41
SLC6A4-205ENST00000579221 HSDL1Q3SXM5 330 aa17.61■□□□□ 0.41
SLC6A4-205ENST00000579221 CCSAPQ6IQ19 270 aaPredicted RBP17.61■□□□□ 0.41
SLC6A4-205ENST00000579221 SLFN12Q8IYM2 578 aa17.61■□□□□ 0.41
SLC6A4-205ENST00000579221 SEPT1Q8WYJ6 367 aa17.61■□□□□ 0.41
SLC6A4-205ENST00000579221 SLC5A5Q92911 643 aa17.61■□□□□ 0.41
SLC6A4-205ENST00000579221 UIMC1Q96RL1 719 aa17.61■□□□□ 0.41
SLC6A4-205ENST00000579221 JPH1Q9HDC5 661 aaPredicted RBP17.61■□□□□ 0.41
SLC6A4-205ENST00000579221 DHX15O43143 795 aaKnown RBP17.6■□□□□ 0.41
SLC6A4-205ENST00000579221 NEMFO60524 1076 aa17.6■□□□□ 0.41
SLC6A4-205ENST00000579221 GAS7O60861 476 aa17.6■□□□□ 0.41
SLC6A4-205ENST00000579221 ASGR1P07306 291 aa17.6■□□□□ 0.41
SLC6A4-205ENST00000579221 MMP3P08254 477 aa17.6■□□□□ 0.41
SLC6A4-205ENST00000579221 MYL3P08590 195 aa17.6■□□□□ 0.41
SLC6A4-205ENST00000579221 ZSCAN22P10073 491 aaPredicted RBP17.6■□□□□ 0.41
SLC6A4-205ENST00000579221 TOB1P50616 345 aaPredicted RBP17.6■□□□□ 0.41
SLC6A4-205ENST00000579221 RESTQ13127 1097 aa17.6■□□□□ 0.41
SLC6A4-205ENST00000579221 CALCRLQ16602 461 aa17.6■□□□□ 0.41
SLC6A4-205ENST00000579221 LRCH2Q5VUJ6 765 aa17.6■□□□□ 0.41
SLC6A4-205ENST00000579221 ETNPPLQ8TBG4 499 aa17.6■□□□□ 0.41
SLC6A4-205ENST00000579221 GPR20Q99678 358 aa17.6■□□□□ 0.41
SLC6A4-205ENST00000579221 TEKT3Q9BXF9 490 aa17.6■□□□□ 0.41
SLC6A4-205ENST00000579221 KCNMB3Q9NPA1 279 aa17.6■□□□□ 0.41
SLC6A4-205ENST00000579221 PHF24Q9UPV7 400 aa17.6■□□□□ 0.41
SLC6A4-205ENST00000579221 KIAA1217Q5T5P2 1943 aa17.6■□□□□ 0.41
SLC6A4-205ENST00000579221 MYH7BA7E2Y1 1941 aa17.59■□□□□ 0.41
SLC6A4-205ENST00000579221 DDX39AO00148 427 aaKnown RBP17.59■□□□□ 0.41
SLC6A4-205ENST00000579221 WNT7AO00755 349 aa17.59■□□□□ 0.41
SLC6A4-205ENST00000579221 CABYRO75952 493 aa17.59■□□□□ 0.41
SLC6A4-205ENST00000579221 ACLYP53396 1101 aa17.59■□□□□ 0.41
SLC6A4-205ENST00000579221 KRT76Q01546 638 aa17.59■□□□□ 0.41
SLC6A4-205ENST00000579221 SP4Q02446 784 aa17.59■□□□□ 0.41
SLC6A4-205ENST00000579221 NECAB2Q7Z6G3 386 aa17.59■□□□□ 0.41
SLC6A4-205ENST00000579221 VTI1AQ96AJ9 217 aa17.59■□□□□ 0.41
SLC6A4-205ENST00000579221 PCDHB6Q9Y5E3 794 aa17.59■□□□□ 0.41
SLC6A4-205ENST00000579221 PSMD10O75832 226 aa17.58■□□□□ 0.4
SLC6A4-205ENST00000579221 MNX1P50219 401 aaPredicted RBP17.58■□□□□ 0.4
SLC6A4-205ENST00000579221 ACTR2P61160 394 aa17.58■□□□□ 0.4
SLC6A4-205ENST00000579221 FOXD4L5Q5VV16 416 aaPredicted RBP17.58■□□□□ 0.4
SLC6A4-205ENST00000579221 ZNF746Q6NUN9 644 aaPredicted RBP17.58■□□□□ 0.4
SLC6A4-205ENST00000579221 FOXD4L4Q8WXT5 416 aaPredicted RBP17.58■□□□□ 0.4
SLC6A4-205ENST00000579221 HAS1Q92839 578 aa17.58■□□□□ 0.4
SLC6A4-205ENST00000579221 PAWRQ96IZ0 340 aaKnown RBP17.58■□□□□ 0.4
SLC6A4-205ENST00000579221 GLT1D1Q96MS3 346 aa17.58■□□□□ 0.4
SLC6A4-205ENST00000579221 MTG1Q9BT17 334 aaPredicted RBP17.58■□□□□ 0.4
SLC6A4-205ENST00000579221 SENP6Q9GZR1 1112 aaPredicted RBP17.58■□□□□ 0.4
SLC6A4-205ENST00000579221 C11orf49Q9H6J7 331 aa17.58■□□□□ 0.4
SLC6A4-205ENST00000579221 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.58■□□□□ 0.4
SLC6A4-205ENST00000579221 GSTTP1A0A1W2PQM5 241 aa17.57■□□□□ 0.4
SLC6A4-205ENST00000579221 ATG7O95352 703 aa17.57■□□□□ 0.4
SLC6A4-205ENST00000579221 HOXD8P13378 290 aaPredicted RBP17.57■□□□□ 0.4
SLC6A4-205ENST00000579221 NBR1Q14596 966 aa17.57■□□□□ 0.4
SLC6A4-205ENST00000579221 MIS18BP1Q6P0N0 1132 aa17.57■□□□□ 0.4
SLC6A4-205ENST00000579221 CXCL17Q6UXB2 119 aa17.57■□□□□ 0.4
SLC6A4-205ENST00000579221 SMAP1Q8IYB5 467 aaPredicted RBP17.57■□□□□ 0.4
SLC6A4-205ENST00000579221 GJA10Q969M2 543 aa17.57■□□□□ 0.4
SLC6A4-205ENST00000579221 FERMT2Q96AC1 680 aa17.57■□□□□ 0.4
SLC6A4-205ENST00000579221 MTMR9Q96QG7 549 aa17.57■□□□□ 0.4
SLC6A4-205ENST00000579221 PCDHA12Q9UN75 941 aa17.57■□□□□ 0.4
SLC6A4-205ENST00000579221 ELP1O95163 1332 aa17.56■□□□□ 0.4
SLC6A4-205ENST00000579221 HTTP42858 3142 aa17.56■□□□□ 0.4
SLC6A4-205ENST00000579221 LAD1O00515 517 aa17.56■□□□□ 0.4
SLC6A4-205ENST00000579221 F13A1P00488 732 aa17.56■□□□□ 0.4
SLC6A4-205ENST00000579221 COL6A1P12109 1028 aa17.56■□□□□ 0.4
SLC6A4-205ENST00000579221 SFNP31947 248 aa17.56■□□□□ 0.4
SLC6A4-205ENST00000579221 TCF7P36402 384 aaPredicted RBP17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms