RNA–Protein interactions for RNA: ENST00000578773.1

GGA3-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-206ENST00000578773 CACNA1IQ9P0X4 2223 aa13.15□□□□□ -0.3
GGA3-206ENST00000578773 C2orf16Q68DN1 1984 aa13.15□□□□□ -0.3
GGA3-206ENST00000578773 LMNAP02545 664 aaKnown RBP13.15□□□□□ -0.3
GGA3-206ENST00000578773 ICAM1P05362 532 aa13.15□□□□□ -0.3
GGA3-206ENST00000578773 TRIM27P14373 513 aa13.15□□□□□ -0.3
GGA3-206ENST00000578773 SLC1A4P43007 532 aa13.15□□□□□ -0.3
GGA3-206ENST00000578773 CCDC105Q8IYK2 499 aa13.15□□□□□ -0.3
GGA3-206ENST00000578773 CRIPAKQ8N1N5 446 aa13.15□□□□□ -0.3
GGA3-206ENST00000578773 KLHL23Q8NBE8 558 aa13.15□□□□□ -0.3
GGA3-206ENST00000578773 CYP2W1Q8TAV3 490 aa13.15□□□□□ -0.3
GGA3-206ENST00000578773 FEZF2Q8TBJ5 459 aa13.15□□□□□ -0.3
GGA3-206ENST00000578773 CHURC1Q8WUH1 139 aa13.15□□□□□ -0.3
GGA3-206ENST00000578773 ZNF689Q96CS4 500 aaPredicted RBP13.15□□□□□ -0.3
GGA3-206ENST00000578773 GMCL1Q96IK5 515 aa13.15□□□□□ -0.3
GGA3-206ENST00000578773 BCL11AQ9H165 835 aa13.15□□□□□ -0.3
GGA3-206ENST00000578773 ARPP21Q9UBL0 812 aaPredicted RBP13.15□□□□□ -0.3
GGA3-206ENST00000578773 SORCS3Q9UPU3 1222 aa13.15□□□□□ -0.3
GGA3-206ENST00000578773 GSG1L2A8MUP6 293 aa13.14□□□□□ -0.31
GGA3-206ENST00000578773 TREHO43280 583 aa13.14□□□□□ -0.31
GGA3-206ENST00000578773 GH1P01241 217 aa13.14□□□□□ -0.31
GGA3-206ENST00000578773 CASTP20810 708 aaKnown RBP13.14□□□□□ -0.31
GGA3-206ENST00000578773 GATMP50440 423 aa13.14□□□□□ -0.31
GGA3-206ENST00000578773 RPS6P62753 249 aaKnown RBP13.14□□□□□ -0.31
GGA3-206ENST00000578773 MTMR3Q13615 1198 aa13.14□□□□□ -0.31
GGA3-206ENST00000578773 BTG3Q14201 252 aaPredicted RBP13.14□□□□□ -0.31
GGA3-206ENST00000578773 SYCE2Q6PIF2 218 aa13.14□□□□□ -0.31
GGA3-206ENST00000578773 RIN2Q8WYP3 895 aaPredicted RBP13.14□□□□□ -0.31
GGA3-206ENST00000578773 HINFPQ9BQA5 517 aa13.14□□□□□ -0.31
GGA3-206ENST00000578773 RANBP17Q9H2T7 1088 aaKnown RBP13.14□□□□□ -0.31
GGA3-206ENST00000578773 PLIN4Q96Q06 1357 aa13.14□□□□□ -0.31
GGA3-206ENST00000578773 NMT2O60551 498 aa13.13□□□□□ -0.31
GGA3-206ENST00000578773 PPFIA3O75145 1194 aa13.13□□□□□ -0.31
GGA3-206ENST00000578773 RARSP54136 660 aaKnown RBP13.13□□□□□ -0.31
GGA3-206ENST00000578773 PAN2Q504Q3 1202 aaKnown RBP13.13□□□□□ -0.31
GGA3-206ENST00000578773 SBK1Q52WX2 424 aa13.13□□□□□ -0.31
GGA3-206ENST00000578773 RNF207Q6ZRF8 634 aa13.13□□□□□ -0.31
GGA3-206ENST00000578773 DHX37Q8IY37 1157 aaKnown RBP13.13□□□□□ -0.31
GGA3-206ENST00000578773 DTWD2Q8NBA8 298 aa13.13□□□□□ -0.31
GGA3-206ENST00000578773 LINC01599Q8WXQ3 324 aa13.13□□□□□ -0.31
GGA3-206ENST00000578773 MFSD1Q9H3U5 465 aa13.13□□□□□ -0.31
GGA3-206ENST00000578773 POMKQ9H5K3 350 aa13.13□□□□□ -0.31
GGA3-206ENST00000578773 TLE6Q9H808 572 aa13.13□□□□□ -0.31
GGA3-206ENST00000578773 CLCN5P51795 746 aa13.12□□□□□ -0.31
GGA3-206ENST00000578773 ATXN1P54253 815 aaKnown RBP13.12□□□□□ -0.31
GGA3-206ENST00000578773 DGKDQ16760 1214 aa13.12□□□□□ -0.31
GGA3-206ENST00000578773 RCSD1Q6JBY9 416 aa13.12□□□□□ -0.31
GGA3-206ENST00000578773 LLGL2Q6P1M3 1020 aa13.12□□□□□ -0.31
GGA3-206ENST00000578773 UBALD2Q8IYN6 164 aa13.12□□□□□ -0.31
GGA3-206ENST00000578773 TMEM57Q8N5G2 664 aa13.12□□□□□ -0.31
GGA3-206ENST00000578773 TBC1D5Q92609 795 aa13.12□□□□□ -0.31
GGA3-206ENST00000578773 BOLA2Q9H3K6 86 aa13.12□□□□□ -0.31
GGA3-206ENST00000578773 PAG1Q9NWQ8 432 aa13.12□□□□□ -0.31
GGA3-206ENST00000578773 COL20A1Q9P218 1284 aa13.12□□□□□ -0.31
GGA3-206ENST00000578773 HCSTQ9UBK5 93 aa13.12□□□□□ -0.31
GGA3-206ENST00000578773 COL4A3Q01955 1670 aa13.12□□□□□ -0.31
GGA3-206ENST00000578773 PATJQ8NI35 1801 aa13.11□□□□□ -0.31
GGA3-206ENST00000578773 LOC102724159A0A0B4J2E5 919 aa13.11□□□□□ -0.31
GGA3-206ENST00000578773 PLA2G6O60733 806 aa13.11□□□□□ -0.31
GGA3-206ENST00000578773 WEE2P0C1S8 567 aa13.11□□□□□ -0.31
GGA3-206ENST00000578773 AOC1P19801 751 aa13.11□□□□□ -0.31
GGA3-206ENST00000578773 KCNC3Q14003 757 aa13.11□□□□□ -0.31
GGA3-206ENST00000578773 PWP2Q15269 919 aaKnown RBP13.11□□□□□ -0.31
GGA3-206ENST00000578773 DUSP6Q16828 381 aa13.11□□□□□ -0.31
GGA3-206ENST00000578773 TRMT2AQ8IZ69 625 aaKnown RBP13.11□□□□□ -0.31
GGA3-206ENST00000578773 NEDD1Q8NHV4 660 aa13.11□□□□□ -0.31
GGA3-206ENST00000578773 ATP6V0A1Q93050 837 aa13.11□□□□□ -0.31
GGA3-206ENST00000578773 P2RX5Q93086 422 aa13.11□□□□□ -0.31
GGA3-206ENST00000578773 PLVAPQ9BX97 442 aa13.11□□□□□ -0.31
GGA3-206ENST00000578773 RWDD3Q9Y3V2 267 aa13.11□□□□□ -0.31
GGA3-206ENST00000578773 MIA3Q5JRA6 1907 aa13.1□□□□□ -0.31
GGA3-206ENST00000578773 DCDC2BA2VCK2 349 aa13.1□□□□□ -0.31
GGA3-206ENST00000578773 DGKIO75912 1065 aa13.1□□□□□ -0.31
GGA3-206ENST00000578773 GHRP10912 638 aa13.1□□□□□ -0.31
GGA3-206ENST00000578773 HOXC8P31273 242 aa13.1□□□□□ -0.31
GGA3-206ENST00000578773 TECP42680 631 aa13.1□□□□□ -0.31
GGA3-206ENST00000578773 ERVFC1P60507 584 aa13.1□□□□□ -0.31
GGA3-206ENST00000578773 ANKRD54Q6NXT1 300 aa13.1□□□□□ -0.31
GGA3-206ENST00000578773 ZNF444Q8N0Y2 327 aaPredicted RBP13.1□□□□□ -0.31
GGA3-206ENST00000578773 DDRGK1Q96HY6 314 aa13.1□□□□□ -0.31
GGA3-206ENST00000578773 NEK1Q96PY6 1258 aa13.1□□□□□ -0.31
GGA3-206ENST00000578773 STRBPQ96SI9 672 aaKnown RBP13.1□□□□□ -0.31
GGA3-206ENST00000578773 DDX41Q9UJV9 622 aaKnown RBP13.1□□□□□ -0.31
GGA3-206ENST00000578773 SYNPO2Q9UMS6 1093 aa13.1□□□□□ -0.31
GGA3-206ENST00000578773 FRMPD2Q68DX3 1309 aaPredicted RBP13.1□□□□□ -0.31
GGA3-206ENST00000578773 ENPP3O14638 875 aa13.09□□□□□ -0.31
GGA3-206ENST00000578773 SMIM10L2AP0DMW4 78 aa13.09□□□□□ -0.31
GGA3-206ENST00000578773 SMIM10L2BP0DMW5 78 aa13.09□□□□□ -0.31
GGA3-206ENST00000578773 TFAP4Q01664 338 aa13.09□□□□□ -0.31
GGA3-206ENST00000578773 APOBRQ0VD83 1088 aa13.09□□□□□ -0.31
GGA3-206ENST00000578773 CCDC96Q2M329 555 aa13.09□□□□□ -0.31
GGA3-206ENST00000578773 HSDL1Q3SXM5 330 aa13.09□□□□□ -0.31
GGA3-206ENST00000578773 KANK3Q6NY19 840 aa13.09□□□□□ -0.31
GGA3-206ENST00000578773 ARHGAP45Q92619 1136 aa13.09□□□□□ -0.31
GGA3-206ENST00000578773 PPP2R3CQ969Q6 453 aa13.09□□□□□ -0.31
GGA3-206ENST00000578773 TAAR1Q96RJ0 339 aa13.09□□□□□ -0.31
GGA3-206ENST00000578773 KATNAL1Q9BW62 490 aa13.09□□□□□ -0.31
GGA3-206ENST00000578773 BCAS3Q9H6U6 928 aa13.09□□□□□ -0.31
GGA3-206ENST00000578773 ERVK-5Q9HDB9 667 aa13.09□□□□□ -0.31
GGA3-206ENST00000578773 IL17RBQ9NRM6 502 aa13.09□□□□□ -0.31
GGA3-206ENST00000578773 C17orf102A2RUQ5 167 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms