RNA–Protein interactions for RNA: ENST00000577824.5

MKS1-206, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 1,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-206ENST00000577824 PCDHB6Q9Y5E3 794 aa14.39□□□□□ -0.11
MKS1-206ENST00000577824 CTAGE5O15320 804 aa14.38□□□□□ -0.11
MKS1-206ENST00000577824 PSMD10O75832 226 aa14.38□□□□□ -0.11
MKS1-206ENST00000577824 GGPS1O95749 300 aa14.38□□□□□ -0.11
MKS1-206ENST00000577824 BMP15O95972 392 aa14.38□□□□□ -0.11
MKS1-206ENST00000577824 GH1P01241 217 aa14.38□□□□□ -0.11
MKS1-206ENST00000577824 GJB1P08034 283 aa14.38□□□□□ -0.11
MKS1-206ENST00000577824 PRPHP41219 470 aa14.38□□□□□ -0.11
MKS1-206ENST00000577824 ATP2C1P98194 919 aaPredicted RBP14.38□□□□□ -0.11
MKS1-206ENST00000577824 ATL3Q6DD88 541 aa14.38□□□□□ -0.11
MKS1-206ENST00000577824 PPTC7Q8NI37 304 aa14.38□□□□□ -0.11
MKS1-206ENST00000577824 LENG1Q96BZ8 264 aaPredicted RBP14.38□□□□□ -0.11
MKS1-206ENST00000577824 RNF208Q9H0X6 261 aa14.38□□□□□ -0.11
MKS1-206ENST00000577824 POLR3EQ9NVU0 708 aa14.38□□□□□ -0.11
MKS1-206ENST00000577824 OGDHLQ9ULD0 1010 aa14.38□□□□□ -0.11
MKS1-206ENST00000577824 A6NJR5 290 aa14.37□□□□□ -0.11
MKS1-206ENST00000577824 CNGA1P29973 690 aa14.37□□□□□ -0.11
MKS1-206ENST00000577824 MCM7P33993 719 aa14.37□□□□□ -0.11
MKS1-206ENST00000577824 GJA8P48165 433 aa14.37□□□□□ -0.11
MKS1-206ENST00000577824 NASPP49321 788 aaPredicted RBP14.37□□□□□ -0.11
MKS1-206ENST00000577824 SPIRE1Q08AE8 756 aa14.37□□□□□ -0.11
MKS1-206ENST00000577824 LAMC2Q13753 1193 aa14.37□□□□□ -0.11
MKS1-206ENST00000577824 CALCRLQ16602 461 aa14.37□□□□□ -0.11
MKS1-206ENST00000577824 GJC2Q5T442 439 aaPredicted RBP14.37□□□□□ -0.11
MKS1-206ENST00000577824 SLFN12Q8IYM2 578 aa14.37□□□□□ -0.11
MKS1-206ENST00000577824 COPS5Q92905 334 aa14.37□□□□□ -0.11
MKS1-206ENST00000577824 TMEM60Q9H2L4 133 aa14.37□□□□□ -0.11
MKS1-206ENST00000577824 JPH1Q9HDC5 661 aaPredicted RBP14.37□□□□□ -0.11
MKS1-206ENST00000577824 XPNPEP3Q9NQH7 507 aa14.37□□□□□ -0.11
MKS1-206ENST00000577824 VAV3Q9UKW4 847 aa14.37□□□□□ -0.11
MKS1-206ENST00000577824 DOCK5Q9H7D0 1870 aa14.36□□□□□ -0.11
MKS1-206ENST00000577824 OR52Z1P0C646 297 aa14.36□□□□□ -0.11
MKS1-206ENST00000577824 PPP2R5CQ13362 524 aa14.36□□□□□ -0.11
MKS1-206ENST00000577824 PTPAQ15257 358 aa14.36□□□□□ -0.11
MKS1-206ENST00000577824 ZNF174Q15697 407 aa14.36□□□□□ -0.11
MKS1-206ENST00000577824 HSDL1Q3SXM5 330 aa14.36□□□□□ -0.11
MKS1-206ENST00000577824 LRCH2Q5VUJ6 765 aa14.36□□□□□ -0.11
MKS1-206ENST00000577824 ARL6IP4Q66PJ3 421 aaKnown RBP14.36□□□□□ -0.11
MKS1-206ENST00000577824 CCSAPQ6IQ19 270 aaPredicted RBP14.36□□□□□ -0.11
MKS1-206ENST00000577824 ZNF746Q6NUN9 644 aaPredicted RBP14.36□□□□□ -0.11
MKS1-206ENST00000577824 FAM173BQ6P4H8 233 aa14.36□□□□□ -0.11
MKS1-206ENST00000577824 CYFIP1Q7L576 1253 aa14.36□□□□□ -0.11
MKS1-206ENST00000577824 DHX37Q8IY37 1157 aaKnown RBP14.36□□□□□ -0.11
MKS1-206ENST00000577824 KLHDC9Q8NEP7 349 aa14.36□□□□□ -0.11
MKS1-206ENST00000577824 OR6J1Q8NGC5 347 aa14.36□□□□□ -0.11
MKS1-206ENST00000577824 U2AF1L4Q8WU68 220 aaKnown RBP14.36□□□□□ -0.11
MKS1-206ENST00000577824 USP28Q96RU2 1077 aa14.36□□□□□ -0.11
MKS1-206ENST00000577824 SDF4Q9BRK5 362 aa14.36□□□□□ -0.11
MKS1-206ENST00000577824 CHMP5Q9NZZ3 219 aa14.36□□□□□ -0.11
MKS1-206ENST00000577824 CEP131Q9UPN4 1083 aa14.36□□□□□ -0.11
MKS1-206ENST00000577824 ATP6V1DQ9Y5K8 247 aa14.36□□□□□ -0.11
MKS1-206ENST00000577824 GAS7O60861 476 aa14.35□□□□□ -0.11
MKS1-206ENST00000577824 ATG7O95352 703 aa14.35□□□□□ -0.11
MKS1-206ENST00000577824 SGPL1O95470 568 aa14.35□□□□□ -0.11
MKS1-206ENST00000577824 MMP3P08254 477 aa14.35□□□□□ -0.11
MKS1-206ENST00000577824 ATP2B1P20020 1258 aa14.35□□□□□ -0.11
MKS1-206ENST00000577824 PTGS1P23219 599 aa14.35□□□□□ -0.11
MKS1-206ENST00000577824 CPT1AP50416 773 aa14.35□□□□□ -0.11
MKS1-206ENST00000577824 KRT76Q01546 638 aa14.35□□□□□ -0.11
MKS1-206ENST00000577824 PTGDRQ13258 359 aa14.35□□□□□ -0.11
MKS1-206ENST00000577824 SMAP1Q8IYB5 467 aaPredicted RBP14.35□□□□□ -0.11
MKS1-206ENST00000577824 RDM1Q8NG50 284 aa14.35□□□□□ -0.11
MKS1-206ENST00000577824 ZNF396Q96N95 335 aaPredicted RBP14.35□□□□□ -0.11
MKS1-206ENST00000577824 DEFB118Q96PH6 123 aa14.35□□□□□ -0.11
MKS1-206ENST00000577824 GPR20Q99678 358 aa14.35□□□□□ -0.11
MKS1-206ENST00000577824 TEKT3Q9BXF9 490 aa14.35□□□□□ -0.11
MKS1-206ENST00000577824 FTOQ9C0B1 505 aaKnown RBP eCLIP14.35□□□□□ -0.11
MKS1-206ENST00000577824 BCAS3Q9H6U6 928 aa14.35□□□□□ -0.11
MKS1-206ENST00000577824 SLC9A2Q9UBY0 812 aa14.35□□□□□ -0.11
MKS1-206ENST00000577824 ELP1O95163 1332 aa14.35□□□□□ -0.11
MKS1-206ENST00000577824 EMSYQ7Z589 1322 aa14.35□□□□□ -0.11
MKS1-206ENST00000577824 IGKV6D-21A0A0A0MT36 114 aa14.34□□□□□ -0.11
MKS1-206ENST00000577824 MYADML2A6NDP7 307 aa14.34□□□□□ -0.11
MKS1-206ENST00000577824 BAG4O95429 457 aaKnown RBP14.34□□□□□ -0.11
MKS1-206ENST00000577824 YEATS4O95619 227 aa14.34□□□□□ -0.11
MKS1-206ENST00000577824 CCNE2O96020 404 aa14.34□□□□□ -0.11
MKS1-206ENST00000577824 PGK1P00558 417 aa14.34□□□□□ -0.11
MKS1-206ENST00000577824 FXR2P51116 673 aaKnown RBP eCLIP14.34□□□□□ -0.11
MKS1-206ENST00000577824 LRRC41Q15345 812 aa14.34□□□□□ -0.11
MKS1-206ENST00000577824 SF3A1Q15459 793 aaKnown RBP14.34□□□□□ -0.11
MKS1-206ENST00000577824 FSCN1Q16658 493 aaKnown RBP14.34□□□□□ -0.11
MKS1-206ENST00000577824 ANO1Q5XXA6 986 aa14.34□□□□□ -0.11
MKS1-206ENST00000577824 IGSF22Q8N9C0 903 aa14.34□□□□□ -0.11
MKS1-206ENST00000577824 ANKLE1Q8NAG6 615 aa14.34□□□□□ -0.11
MKS1-206ENST00000577824 SPATA33Q96N06 139 aa14.34□□□□□ -0.11
MKS1-206ENST00000577824 TSEN34Q9BSV6 310 aaKnown RBP14.34□□□□□ -0.11
MKS1-206ENST00000577824 MLXIPQ9HAP2 919 aa14.34□□□□□ -0.11
MKS1-206ENST00000577824 SPC25Q9HBM1 224 aa14.34□□□□□ -0.11
MKS1-206ENST00000577824 CLIC4Q9Y696 253 aa14.34□□□□□ -0.11
MKS1-206ENST00000577824 MOXD2PA6NHM9 499 aa14.33□□□□□ -0.12
MKS1-206ENST00000577824 DNM1LO00429 736 aa14.33□□□□□ -0.12
MKS1-206ENST00000577824 DYNC1LI2O43237 492 aaPredicted RBP14.33□□□□□ -0.12
MKS1-206ENST00000577824 C6orf222P0C671 652 aaPredicted RBP14.33□□□□□ -0.12
MKS1-206ENST00000577824 SFNP31947 248 aa14.33□□□□□ -0.12
MKS1-206ENST00000577824 MNX1P50219 401 aaPredicted RBP14.33□□□□□ -0.12
MKS1-206ENST00000577824 JAK3P52333 1124 aa14.33□□□□□ -0.12
MKS1-206ENST00000577824 ACTR2P61160 394 aa14.33□□□□□ -0.12
MKS1-206ENST00000577824 SLC39A14Q15043 492 aa14.33□□□□□ -0.12
MKS1-206ENST00000577824 FOXD4L5Q5VV16 416 aaPredicted RBP14.33□□□□□ -0.12
MKS1-206ENST00000577824 ABHD15Q6UXT9 468 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms