RNA–Protein interactions for RNA: ENST00000577721.5

SMARCE1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 449 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-212ENST00000577721 NOD1Q9Y239 953 aa8.11□□□□□ -1.11
SMARCE1-212ENST00000577721 MTCH2Q9Y6C9 303 aa8.11□□□□□ -1.11
SMARCE1-212ENST00000577721 SMCHD1A6NHR9 2005 aa8.1□□□□□ -1.11
SMARCE1-212ENST00000577721 ZNF536O15090 1300 aa8.1□□□□□ -1.11
SMARCE1-212ENST00000577721 TNKSO95271 1327 aa8.1□□□□□ -1.11
SMARCE1-212ENST00000577721 PTPDC1A2A3K4 754 aa8.1□□□□□ -1.11
SMARCE1-212ENST00000577721 PROCP04070 461 aa8.1□□□□□ -1.11
SMARCE1-212ENST00000577721 NR3C2P08235 984 aa8.1□□□□□ -1.11
SMARCE1-212ENST00000577721 CPT1AP50416 773 aa8.1□□□□□ -1.11
SMARCE1-212ENST00000577721 PPARAQ07869 468 aa8.1□□□□□ -1.11
SMARCE1-212ENST00000577721 BAATQ14032 418 aaPredicted RBP8.1□□□□□ -1.11
SMARCE1-212ENST00000577721 NBPF20Q3BBV1 942 aa8.1□□□□□ -1.11
SMARCE1-212ENST00000577721 DUSP28Q4G0W2 176 aa8.1□□□□□ -1.11
SMARCE1-212ENST00000577721 KRT40Q6A162 431 aa8.1□□□□□ -1.11
SMARCE1-212ENST00000577721 LYPD4Q6UWN0 246 aa8.1□□□□□ -1.11
SMARCE1-212ENST00000577721 PPP1R13LQ8WUF5 828 aa8.1□□□□□ -1.11
SMARCE1-212ENST00000577721 EPHX3Q9H6B9 360 aa8.1□□□□□ -1.11
SMARCE1-212ENST00000577721 COG5Q9UP83 839 aa8.1□□□□□ -1.11
SMARCE1-212ENST00000577721 HCN4Q9Y3Q4 1203 aa8.1□□□□□ -1.11
SMARCE1-212ENST00000577721 RAD50Q92878 1312 aa8.09□□□□□ -1.11
SMARCE1-212ENST00000577721 RANBP6O60518 1105 aaKnown RBP8.09□□□□□ -1.11
SMARCE1-212ENST00000577721 KPNA6O60684 536 aa8.09□□□□□ -1.11
SMARCE1-212ENST00000577721 PLA2G6O60733 806 aa8.09□□□□□ -1.11
SMARCE1-212ENST00000577721 IQCF3P0C7M6 154 aa8.09□□□□□ -1.11
SMARCE1-212ENST00000577721 CALML3P27482 149 aa8.09□□□□□ -1.11
SMARCE1-212ENST00000577721 RFC2P35250 354 aa8.09□□□□□ -1.11
SMARCE1-212ENST00000577721 SLC16A2P36021 539 aa8.09□□□□□ -1.11
SMARCE1-212ENST00000577721 KCNJ6P48051 423 aa8.09□□□□□ -1.11
SMARCE1-212ENST00000577721 ALDH5A1P51649 535 aaPredicted RBP8.09□□□□□ -1.11
SMARCE1-212ENST00000577721 PURAQ00577 322 aaKnown RBP8.09□□□□□ -1.11
SMARCE1-212ENST00000577721 CTDSPL2Q05D32 466 aa8.09□□□□□ -1.11
SMARCE1-212ENST00000577721 PDE4DQ08499 809 aa8.09□□□□□ -1.11
SMARCE1-212ENST00000577721 BFSP2Q13515 415 aa8.09□□□□□ -1.11
SMARCE1-212ENST00000577721 TMEM31Q5JXX7 168 aa8.09□□□□□ -1.11
SMARCE1-212ENST00000577721 BEND7Q8N7W2 519 aaPredicted RBP8.09□□□□□ -1.11
SMARCE1-212ENST00000577721 PHOSPHO2Q8TCD6 241 aa8.09□□□□□ -1.11
SMARCE1-212ENST00000577721 SLC9A7Q96T83 725 aa8.09□□□□□ -1.11
SMARCE1-212ENST00000577721 SEC62Q99442 399 aaKnown RBP8.09□□□□□ -1.11
SMARCE1-212ENST00000577721 MPHOSPH6Q99547 160 aaKnown RBP8.09□□□□□ -1.11
SMARCE1-212ENST00000577721 GPCPD1Q9NPB8 672 aa8.09□□□□□ -1.11
SMARCE1-212ENST00000577721 INCENPQ9NQS7 918 aa8.09□□□□□ -1.11
SMARCE1-212ENST00000577721 TOMM22Q9NS69 142 aa8.09□□□□□ -1.11
SMARCE1-212ENST00000577721 CUL9Q8IWT3 2517 aa8.09□□□□□ -1.11
SMARCE1-212ENST00000577721 EPOPA6NHQ4 379 aa8.08□□□□□ -1.12
SMARCE1-212ENST00000577721 FIGNL2A6NMB9 653 aa8.08□□□□□ -1.12
SMARCE1-212ENST00000577721 NMT2O60551 498 aa8.08□□□□□ -1.12
SMARCE1-212ENST00000577721 ICAM1P05362 532 aa8.08□□□□□ -1.12
SMARCE1-212ENST00000577721 TAP1Q03518 808 aa8.08□□□□□ -1.12
SMARCE1-212ENST00000577721 PPP2R5BQ15173 497 aa8.08□□□□□ -1.12
SMARCE1-212ENST00000577721 RRP12Q5JTH9 1297 aaKnown RBP8.08□□□□□ -1.12
SMARCE1-212ENST00000577721 TTBK2Q6IQ55 1244 aa8.08□□□□□ -1.12
SMARCE1-212ENST00000577721 HERC6Q8IVU3 1022 aa8.08□□□□□ -1.12
SMARCE1-212ENST00000577721 MORC4Q8TE76 937 aa8.08□□□□□ -1.12
SMARCE1-212ENST00000577721 DCAF4Q8WV16 495 aa8.08□□□□□ -1.12
SMARCE1-212ENST00000577721 VWCEQ96DN2 955 aa8.08□□□□□ -1.12
SMARCE1-212ENST00000577721 CRBNQ96SW2 442 aa8.08□□□□□ -1.12
SMARCE1-212ENST00000577721 LRFN3Q9BTN0 628 aa8.08□□□□□ -1.12
SMARCE1-212ENST00000577721 FSD1Q9BTV5 496 aa8.08□□□□□ -1.12
SMARCE1-212ENST00000577721 DNAH12Q6ZR08 3092 aa8.08□□□□□ -1.12
SMARCE1-212ENST00000577721 ZNFX1Q9P2E3 1918 aaKnown RBP8.07□□□□□ -1.12
SMARCE1-212ENST00000577721 FRMPD2Q68DX3 1309 aaPredicted RBP8.07□□□□□ -1.12
SMARCE1-212ENST00000577721 B4DLN1 442 aa8.07□□□□□ -1.12
SMARCE1-212ENST00000577721 NFIBO00712 420 aa8.07□□□□□ -1.12
SMARCE1-212ENST00000577721 NKRFO15226 690 aaKnown RBP eCLIP8.07□□□□□ -1.12
SMARCE1-212ENST00000577721 CELA2BP08218 269 aaPredicted RBP8.07□□□□□ -1.12
SMARCE1-212ENST00000577721 TXNP10599 105 aaKnown RBP8.07□□□□□ -1.12
SMARCE1-212ENST00000577721 POU3F3P20264 500 aaPredicted RBP8.07□□□□□ -1.12
SMARCE1-212ENST00000577721 MRPL12P52815 198 aaKnown RBP8.07□□□□□ -1.12
SMARCE1-212ENST00000577721 SRSF11Q05519 484 aaKnown RBP8.07□□□□□ -1.12
SMARCE1-212ENST00000577721 GRB10Q13322 594 aa8.07□□□□□ -1.12
SMARCE1-212ENST00000577721 PTGISQ16647 500 aa8.07□□□□□ -1.12
SMARCE1-212ENST00000577721 SYDE2Q5VT97 1194 aa8.07□□□□□ -1.12
SMARCE1-212ENST00000577721 NFRKBQ6P4R8 1299 aa8.07□□□□□ -1.12
SMARCE1-212ENST00000577721 RNF207Q6ZRF8 634 aa8.07□□□□□ -1.12
SMARCE1-212ENST00000577721 RASGRP2Q7LDG7 609 aa8.07□□□□□ -1.12
SMARCE1-212ENST00000577721 COPS5Q92905 334 aa8.07□□□□□ -1.12
SMARCE1-212ENST00000577721 RANBP17Q9H2T7 1088 aaKnown RBP8.07□□□□□ -1.12
SMARCE1-212ENST00000577721 IL17RBQ9NRM6 502 aa8.07□□□□□ -1.12
SMARCE1-212ENST00000577721 CNTNAP5Q8WYK1 1306 aa8.06□□□□□ -1.12
SMARCE1-212ENST00000577721 COL11A1P12107 1806 aaPredicted RBP8.06□□□□□ -1.12
SMARCE1-212ENST00000577721 LOC102724159A0A0B4J2E5 919 aa8.06□□□□□ -1.12
SMARCE1-212ENST00000577721 RBM47A0AV96 593 aaKnown RBP8.06□□□□□ -1.12
SMARCE1-212ENST00000577721 SLC35F4A4IF30 521 aa8.06□□□□□ -1.12
SMARCE1-212ENST00000577721 BAIAP3O94812 1187 aa8.06□□□□□ -1.12
SMARCE1-212ENST00000577721 ITGB2P05107 769 aa8.06□□□□□ -1.12
SMARCE1-212ENST00000577721 CTHP32929 405 aa8.06□□□□□ -1.12
SMARCE1-212ENST00000577721 PTPN11Q06124 597 aaPredicted RBP8.06□□□□□ -1.12
SMARCE1-212ENST00000577721 AGERQ15109 404 aa8.06□□□□□ -1.12
SMARCE1-212ENST00000577721 PWP2Q15269 919 aaKnown RBP8.06□□□□□ -1.12
SMARCE1-212ENST00000577721 ZMYM1Q5SVZ6 1142 aa8.06□□□□□ -1.12
SMARCE1-212ENST00000577721 SLC30A10Q6XR72 485 aa8.06□□□□□ -1.12
SMARCE1-212ENST00000577721 SCFD2Q8WU76 684 aa8.06□□□□□ -1.12
SMARCE1-212ENST00000577721 DCTPP1Q9H773 170 aa8.06□□□□□ -1.12
SMARCE1-212ENST00000577721 RCAN3Q9UKA8 241 aa8.06□□□□□ -1.12
SMARCE1-212ENST00000577721 PNMA2Q9UL42 364 aa8.06□□□□□ -1.12
SMARCE1-212ENST00000577721 MTUS1Q9ULD2 1270 aa8.06□□□□□ -1.12
SMARCE1-212ENST00000577721 PLIN4Q96Q06 1357 aa8.06□□□□□ -1.12
SMARCE1-212ENST00000577721 PLXNA1Q9UIW2 1896 aa8.06□□□□□ -1.12
SMARCE1-212ENST00000577721 BAZ2AQ9UIF9 1905 aaKnown RBP8.05□□□□□ -1.12
SMARCE1-212ENST00000577721 EYSQ5T1H1 3165 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms