RNA–Protein interactions for RNA: ENST00000577536.1

CDH8-204, Transcript of cadherin 8, humanhuman

TSL 3

Gene CDH8, Length 324 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-204ENST00000577536 TTC9BQ8N6N2 239 aa4.3□□□□□ -1.72
CDH8-204ENST00000577536 TTLL11Q8NHH1 800 aa4.3□□□□□ -1.72
CDH8-204ENST00000577536 PIP4K2CQ8TBX8 421 aa4.3□□□□□ -1.72
CDH8-204ENST00000577536 DCAF4Q8WV16 495 aa4.3□□□□□ -1.72
CDH8-204ENST00000577536 YTHDC1Q96MU7 727 aaKnown RBP4.3□□□□□ -1.72
CDH8-204ENST00000577536 SAMD11Q96NU1 681 aa4.3□□□□□ -1.72
CDH8-204ENST00000577536 WRNIP1Q96S55 665 aa4.3□□□□□ -1.72
CDH8-204ENST00000577536 AARSD1Q9BTE6 412 aaKnown RBP4.3□□□□□ -1.72
CDH8-204ENST00000577536 TMEM168Q9H0V1 697 aa4.3□□□□□ -1.72
CDH8-204ENST00000577536 L2HGDHQ9H9P8 463 aa4.3□□□□□ -1.72
CDH8-204ENST00000577536 ARHGEF4Q9NR80 690 aa4.3□□□□□ -1.72
CDH8-204ENST00000577536 CROTQ9UKG9 612 aa4.3□□□□□ -1.72
CDH8-204ENST00000577536 WASF3Q9UPY6 502 aa4.3□□□□□ -1.72
CDH8-204ENST00000577536 MYRFQ9Y2G1 1151 aa4.3□□□□□ -1.72
CDH8-204ENST00000577536 ZNF536O15090 1300 aa4.29□□□□□ -1.72
CDH8-204ENST00000577536 PRODHO43272 600 aa4.29□□□□□ -1.72
CDH8-204ENST00000577536 MLLT6P55198 1093 aaPredicted RBP4.29□□□□□ -1.72
CDH8-204ENST00000577536 PUM1Q14671 1186 aaKnown RBP eCLIP4.29□□□□□ -1.72
CDH8-204ENST00000577536 TMC5Q6UXY8 1006 aa4.29□□□□□ -1.72
CDH8-204ENST00000577536 LBX2Q6XYB7 198 aa4.29□□□□□ -1.72
CDH8-204ENST00000577536 PLEKHH3Q7Z736 793 aa4.29□□□□□ -1.72
CDH8-204ENST00000577536 ZCCHC14Q8WYQ9 949 aaKnown RBP4.29□□□□□ -1.72
CDH8-204ENST00000577536 OSBP2Q969R2 916 aa4.29□□□□□ -1.72
CDH8-204ENST00000577536 MBD6Q96DN6 1003 aa4.29□□□□□ -1.72
CDH8-204ENST00000577536 LOXL4Q96JB6 756 aa4.29□□□□□ -1.72
CDH8-204ENST00000577536 SSBP3Q9BWW4 388 aaPredicted RBP4.29□□□□□ -1.72
CDH8-204ENST00000577536 RBPJLQ9UBG7 517 aa4.29□□□□□ -1.72
CDH8-204ENST00000577536 SLC27A2O14975 620 aa4.28□□□□□ -1.72
CDH8-204ENST00000577536 PABPC1P11940 636 aaKnown RBP4.28□□□□□ -1.72
CDH8-204ENST00000577536 GRK2P25098 689 aa4.28□□□□□ -1.72
CDH8-204ENST00000577536 GRK3P35626 688 aa4.28□□□□□ -1.72
CDH8-204ENST00000577536 GRIN1Q05586 938 aa4.28□□□□□ -1.72
CDH8-204ENST00000577536 RAB33AQ14088 237 aa4.28□□□□□ -1.72
CDH8-204ENST00000577536 SURF1Q15526 300 aa4.28□□□□□ -1.72
CDH8-204ENST00000577536 NTRK3Q16288 839 aa4.28□□□□□ -1.72
CDH8-204ENST00000577536 KIZQ2M2Z5 673 aa4.28□□□□□ -1.72
CDH8-204ENST00000577536 CPZQ66K79 652 aa4.28□□□□□ -1.72
CDH8-204ENST00000577536 STYK1Q6J9G0 422 aa4.28□□□□□ -1.72
CDH8-204ENST00000577536 KCNT2Q6UVM3 1135 aa4.28□□□□□ -1.72
CDH8-204ENST00000577536 GLB1LQ6UWU2 654 aa4.28□□□□□ -1.72
CDH8-204ENST00000577536 NSMFQ6X4W1 530 aa4.28□□□□□ -1.72
CDH8-204ENST00000577536 OTOP3Q7RTS5 596 aa4.28□□□□□ -1.72
CDH8-204ENST00000577536 PROSER1Q86XN7 944 aa4.28□□□□□ -1.72
CDH8-204ENST00000577536 ST13P5Q8NFI4 369 aaPredicted RBP4.28□□□□□ -1.72
CDH8-204ENST00000577536 CLEC4DQ8WXI8 215 aa4.28□□□□□ -1.72
CDH8-204ENST00000577536 C8orf49Q96NF6 230 aa4.28□□□□□ -1.72
CDH8-204ENST00000577536 ZFYVE21Q9BQ24 234 aa4.28□□□□□ -1.72
CDH8-204ENST00000577536 C1QTNF3Q9BXJ4 246 aa4.28□□□□□ -1.72
CDH8-204ENST00000577536 KRTAP3-1Q9BYR8 98 aa4.28□□□□□ -1.72
CDH8-204ENST00000577536 FTSJ1Q9UET6 329 aa4.28□□□□□ -1.72
CDH8-204ENST00000577536 TRAV20A0A0B4J274 112 aa4.27□□□□□ -1.73
CDH8-204ENST00000577536 LAMTOR5O43504 91 aa4.27□□□□□ -1.73
CDH8-204ENST00000577536 GNAT1P11488 350 aa4.27□□□□□ -1.73
CDH8-204ENST00000577536 COL6A2P12110 1019 aa4.27□□□□□ -1.73
CDH8-204ENST00000577536 ZNF20P17024 532 aa4.27□□□□□ -1.73
CDH8-204ENST00000577536 RBM25P49756 843 aaKnown RBP4.27□□□□□ -1.73
CDH8-204ENST00000577536 GPR85P60893 370 aa4.27□□□□□ -1.73
CDH8-204ENST00000577536 SPIRE1Q08AE8 756 aa4.27□□□□□ -1.73
CDH8-204ENST00000577536 TUSC3Q13454 348 aa4.27□□□□□ -1.73
CDH8-204ENST00000577536 VASNQ6EMK4 673 aa4.27□□□□□ -1.73
CDH8-204ENST00000577536 PKN3Q6P5Z2 889 aa4.27□□□□□ -1.73
CDH8-204ENST00000577536 TRMT10BQ6PF06 316 aaKnown RBP4.27□□□□□ -1.73
CDH8-204ENST00000577536 LIMS2Q7Z4I7 341 aa4.27□□□□□ -1.73
CDH8-204ENST00000577536 RBM12BQ8IXT5 1001 aaKnown RBP4.27□□□□□ -1.73
CDH8-204ENST00000577536 IFNL3Q8IZI9 196 aa4.27□□□□□ -1.73
CDH8-204ENST00000577536 LRRC47Q8N1G4 583 aaKnown RBP4.27□□□□□ -1.73
CDH8-204ENST00000577536 KLHL36Q8N4N3 616 aa4.27□□□□□ -1.73
CDH8-204ENST00000577536 DTX3Q8N9I9 347 aa4.27□□□□□ -1.73
CDH8-204ENST00000577536 UHMK1Q8TAS1 419 aaKnown RBP4.27□□□□□ -1.73
CDH8-204ENST00000577536 ZNF669Q96BR6 464 aaPredicted RBP4.27□□□□□ -1.73
CDH8-204ENST00000577536 KCNJ15Q99712 375 aa4.27□□□□□ -1.73
CDH8-204ENST00000577536 IGSF5Q9NSI5 407 aa4.27□□□□□ -1.73
CDH8-204ENST00000577536 NUB1Q9Y5A7 615 aa4.27□□□□□ -1.73
CDH8-204ENST00000577536 BLACEA4D250 179 aa4.26□□□□□ -1.73
CDH8-204ENST00000577536 C1QTNF3-AMACRE9PGA6 284 aa4.26□□□□□ -1.73
CDH8-204ENST00000577536 NKRFO15226 690 aaKnown RBP eCLIP4.26□□□□□ -1.73
CDH8-204ENST00000577536 SUV39H1O43463 412 aa4.26□□□□□ -1.73
CDH8-204ENST00000577536 LTFP02788 710 aa4.26□□□□□ -1.73
CDH8-204ENST00000577536 SOD2P04179 222 aa4.26□□□□□ -1.73
CDH8-204ENST00000577536 COL6A1P12109 1028 aa4.26□□□□□ -1.73
CDH8-204ENST00000577536 FAHP16930 419 aa4.26□□□□□ -1.73
CDH8-204ENST00000577536 IFRD2Q12894 506 aaPredicted RBP4.26□□□□□ -1.73
CDH8-204ENST00000577536 NFATC3Q12968 1075 aa4.26□□□□□ -1.73
CDH8-204ENST00000577536 PAN2Q504Q3 1202 aaKnown RBP4.26□□□□□ -1.73
CDH8-204ENST00000577536 HABP4Q5JVS0 413 aaKnown RBP4.26□□□□□ -1.73
CDH8-204ENST00000577536 YOD1Q5VVQ6 348 aaPredicted RBP4.26□□□□□ -1.73
CDH8-204ENST00000577536 KBTBD2Q8IY47 623 aa4.26□□□□□ -1.73
CDH8-204ENST00000577536 CHST13Q8NET6 341 aa4.26□□□□□ -1.73
CDH8-204ENST00000577536 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.26□□□□□ -1.73
CDH8-204ENST00000577536 IGDCC4Q8TDY8 1250 aa4.26□□□□□ -1.73
CDH8-204ENST00000577536 TRIM55Q9BYV6 548 aa4.26□□□□□ -1.73
CDH8-204ENST00000577536 PDGFDQ9GZP0 370 aaPredicted RBP4.26□□□□□ -1.73
CDH8-204ENST00000577536 DLL4Q9NR61 685 aa4.26□□□□□ -1.73
CDH8-204ENST00000577536 PPP4R1LQ9P1A2 415 aa4.26□□□□□ -1.73
CDH8-204ENST00000577536 TELO2Q9Y4R8 837 aa4.26□□□□□ -1.73
CDH8-204ENST00000577536 FAM47E-STBD1D6RA91 191 aa4.25□□□□□ -1.73
CDH8-204ENST00000577536 CHGBP05060 677 aa4.25□□□□□ -1.73
CDH8-204ENST00000577536 EPHA5P54756 1037 aa4.25□□□□□ -1.73
CDH8-204ENST00000577536 EPHB4P54760 987 aa4.25□□□□□ -1.73
CDH8-204ENST00000577536 PPP2CBP62714 309 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms