RNA–Protein interactions for RNA: ENST00000577535.1

TNFAIP1-203, Transcript of TNF alpha induced protein 1, humanhuman

TSL 3

Gene TNFAIP1, Length 482 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-203ENST00000577535 GPR20Q99678 358 aa13.9□□□□□ -0.18
TNFAIP1-203ENST00000577535 CXXC1Q9P0U4 656 aaPredicted RBP13.9□□□□□ -0.18
TNFAIP1-203ENST00000577535 UBIAD1Q9Y5Z9 338 aa13.9□□□□□ -0.18
TNFAIP1-203ENST00000577535 SLC4A7Q9Y6M7 1214 aa13.9□□□□□ -0.18
TNFAIP1-203ENST00000577535 SCN10AQ9Y5Y9 1956 aa13.9□□□□□ -0.18
TNFAIP1-203ENST00000577535 LAMA2P24043 3122 aaKnown RBP13.9□□□□□ -0.18
TNFAIP1-203ENST00000577535 STXBP3O00186 592 aa13.89□□□□□ -0.19
TNFAIP1-203ENST00000577535 LGALS2P05162 132 aa13.89□□□□□ -0.19
TNFAIP1-203ENST00000577535 SELPP16109 830 aa13.89□□□□□ -0.19
TNFAIP1-203ENST00000577535 ITGB5P18084 799 aa13.89□□□□□ -0.19
TNFAIP1-203ENST00000577535 PTK7Q13308 1070 aa13.89□□□□□ -0.19
TNFAIP1-203ENST00000577535 MTMR1Q13613 665 aa13.89□□□□□ -0.19
TNFAIP1-203ENST00000577535 PFKFB3Q16875 520 aaPredicted RBP13.89□□□□□ -0.19
TNFAIP1-203ENST00000577535 TYW1BQ6NUM6 668 aa13.89□□□□□ -0.19
TNFAIP1-203ENST00000577535 TIFAQ96CG3 184 aa13.89□□□□□ -0.19
TNFAIP1-203ENST00000577535 VWCEQ96DN2 955 aa13.89□□□□□ -0.19
TNFAIP1-203ENST00000577535 CTAGE1Q96RT6 745 aa13.89□□□□□ -0.19
TNFAIP1-203ENST00000577535 CDX2Q99626 313 aaPredicted RBP13.89□□□□□ -0.19
TNFAIP1-203ENST00000577535 FTOQ9C0B1 505 aaKnown RBP eCLIP13.89□□□□□ -0.19
TNFAIP1-203ENST00000577535 TTYH1Q9H313 450 aaPredicted RBP13.89□□□□□ -0.19
TNFAIP1-203ENST00000577535 ZSWIM6Q9HCJ5 1215 aa13.89□□□□□ -0.19
TNFAIP1-203ENST00000577535 JADE2Q9NQC1 790 aa13.89□□□□□ -0.19
TNFAIP1-203ENST00000577535 MSRAQ9UJ68 235 aa13.89□□□□□ -0.19
TNFAIP1-203ENST00000577535 CYP46A1Q9Y6A2 500 aa13.89□□□□□ -0.19
TNFAIP1-203ENST00000577535 C17orf102A2RUQ5 167 aa13.88□□□□□ -0.19
TNFAIP1-203ENST00000577535 ZBBXA8MT70 800 aa13.88□□□□□ -0.19
TNFAIP1-203ENST00000577535 GRXCR1A8MXD5 290 aa13.88□□□□□ -0.19
TNFAIP1-203ENST00000577535 PRPF3O43395 683 aaKnown RBP13.88□□□□□ -0.19
TNFAIP1-203ENST00000577535 ATP9AO75110 1047 aa13.88□□□□□ -0.19
TNFAIP1-203ENST00000577535 GNAT1P11488 350 aa13.88□□□□□ -0.19
TNFAIP1-203ENST00000577535 SCG2P13521 617 aa13.88□□□□□ -0.19
TNFAIP1-203ENST00000577535 EVCP57679 992 aa13.88□□□□□ -0.19
TNFAIP1-203ENST00000577535 AKAP17AQ02040 695 aaKnown RBP13.88□□□□□ -0.19
TNFAIP1-203ENST00000577535 RBL2Q08999 1139 aa13.88□□□□□ -0.19
TNFAIP1-203ENST00000577535 AP3B2Q13367 1082 aa13.88□□□□□ -0.19
TNFAIP1-203ENST00000577535 RAB30Q15771 203 aa13.88□□□□□ -0.19
TNFAIP1-203ENST00000577535 MCTP2Q6DN12 878 aa13.88□□□□□ -0.19
TNFAIP1-203ENST00000577535 LRRC8DQ7L1W4 858 aa13.88□□□□□ -0.19
TNFAIP1-203ENST00000577535 CCDC12Q8WUD4 166 aaPredicted RBP13.88□□□□□ -0.19
TNFAIP1-203ENST00000577535 PBX4Q9BYU1 374 aa13.88□□□□□ -0.19
TNFAIP1-203ENST00000577535 TM6SF1Q9BZW5 370 aa13.88□□□□□ -0.19
TNFAIP1-203ENST00000577535 ZNF215Q9UL58 517 aaPredicted RBP13.88□□□□□ -0.19
TNFAIP1-203ENST00000577535 NID2Q14112 1375 aa13.87□□□□□ -0.19
TNFAIP1-203ENST00000577535 CKBP12277 381 aa13.87□□□□□ -0.19
TNFAIP1-203ENST00000577535 KCNA2P16389 499 aa13.87□□□□□ -0.19
TNFAIP1-203ENST00000577535 PDIA3P30101 505 aaKnown RBP13.87□□□□□ -0.19
TNFAIP1-203ENST00000577535 SP4Q02446 784 aa13.87□□□□□ -0.19
TNFAIP1-203ENST00000577535 UTP14CQ5TAP6 766 aaKnown RBP13.87□□□□□ -0.19
TNFAIP1-203ENST00000577535 SEPT1Q8WYJ6 367 aa13.87□□□□□ -0.19
TNFAIP1-203ENST00000577535 DHX38Q92620 1227 aaKnown RBP13.87□□□□□ -0.19
TNFAIP1-203ENST00000577535 MXRA8Q9BRK3 442 aa13.87□□□□□ -0.19
TNFAIP1-203ENST00000577535 ZNF576Q9H609 170 aa13.87□□□□□ -0.19
TNFAIP1-203ENST00000577535 C6orf50Q9HD87 102 aa13.87□□□□□ -0.19
TNFAIP1-203ENST00000577535 ESYT2A0FGR8 921 aa13.86□□□□□ -0.19
TNFAIP1-203ENST00000577535 SMIM10L2AP0DMW4 78 aa13.86□□□□□ -0.19
TNFAIP1-203ENST00000577535 SMIM10L2BP0DMW5 78 aa13.86□□□□□ -0.19
TNFAIP1-203ENST00000577535 ATP2A2P16615 1042 aaKnown RBP13.86□□□□□ -0.19
TNFAIP1-203ENST00000577535 GNA11P29992 359 aa13.86□□□□□ -0.19
TNFAIP1-203ENST00000577535 TCF7P36402 384 aaPredicted RBP13.86□□□□□ -0.19
TNFAIP1-203ENST00000577535 PBX2P40425 430 aa13.86□□□□□ -0.19
TNFAIP1-203ENST00000577535 CLK2P49760 499 aaKnown RBP13.86□□□□□ -0.19
TNFAIP1-203ENST00000577535 ZNF200P98182 395 aaPredicted RBP13.86□□□□□ -0.19
TNFAIP1-203ENST00000577535 CEP55Q53EZ4 464 aa13.86□□□□□ -0.19
TNFAIP1-203ENST00000577535 SERINC5Q86VE9 423 aa13.86□□□□□ -0.19
TNFAIP1-203ENST00000577535 SLC17A8Q8NDX2 589 aa13.86□□□□□ -0.19
TNFAIP1-203ENST00000577535 PHOSPHO2Q8TCD6 241 aa13.86□□□□□ -0.19
TNFAIP1-203ENST00000577535 ATP6V0A1Q93050 837 aa13.86□□□□□ -0.19
TNFAIP1-203ENST00000577535 RNF26Q9BY78 433 aaPredicted RBP13.86□□□□□ -0.19
TNFAIP1-203ENST00000577535 ANO3Q9BYT9 981 aa13.86□□□□□ -0.19
TNFAIP1-203ENST00000577535 ZMYND12Q9H0C1 365 aa13.86□□□□□ -0.19
TNFAIP1-203ENST00000577535 RNPEPQ9H4A4 650 aa13.86□□□□□ -0.19
TNFAIP1-203ENST00000577535 KCNH7Q9NS40 1196 aa13.86□□□□□ -0.19
TNFAIP1-203ENST00000577535 EIF5BO60841 1220 aaKnown RBP13.85□□□□□ -0.19
TNFAIP1-203ENST00000577535 BAIAP3O94812 1187 aa13.85□□□□□ -0.19
TNFAIP1-203ENST00000577535 IFNAR1P17181 557 aa13.85□□□□□ -0.19
TNFAIP1-203ENST00000577535 HOXC8P31273 242 aa13.85□□□□□ -0.19
TNFAIP1-203ENST00000577535 ZNF76P36508 570 aa13.85□□□□□ -0.19
TNFAIP1-203ENST00000577535 SREBF1P36956 1147 aa13.85□□□□□ -0.19
TNFAIP1-203ENST00000577535 CCT2P78371 535 aaKnown RBP13.85□□□□□ -0.19
TNFAIP1-203ENST00000577535 HIC1Q14526 733 aa13.85□□□□□ -0.19
TNFAIP1-203ENST00000577535 GRIN2CQ14957 1233 aa13.85□□□□□ -0.19
TNFAIP1-203ENST00000577535 NTRK3Q16288 839 aa13.85□□□□□ -0.19
TNFAIP1-203ENST00000577535 PKN1Q16512 942 aa13.85□□□□□ -0.19
TNFAIP1-203ENST00000577535 TRIM71Q2Q1W2 868 aaKnown RBP13.85□□□□□ -0.19
TNFAIP1-203ENST00000577535 PHKBQ93100 1093 aa13.85□□□□□ -0.19
TNFAIP1-203ENST00000577535 ZNF274Q96GC6 653 aaPredicted RBP13.85□□□□□ -0.19
TNFAIP1-203ENST00000577535 PGBD1Q96JS3 809 aa13.85□□□□□ -0.19
TNFAIP1-203ENST00000577535 SDF4Q9BRK5 362 aa13.85□□□□□ -0.19
TNFAIP1-203ENST00000577535 SLC28A3Q9HAS3 691 aa13.85□□□□□ -0.19
TNFAIP1-203ENST00000577535 SETD4Q9NVD3 440 aa13.85□□□□□ -0.19
TNFAIP1-203ENST00000577535 TMEM260Q9NX78 707 aa13.85□□□□□ -0.19
TNFAIP1-203ENST00000577535 PKD2L1Q9P0L9 805 aa13.85□□□□□ -0.19
TNFAIP1-203ENST00000577535 PCDHA11Q9Y5I1 949 aa13.85□□□□□ -0.19
TNFAIP1-203ENST00000577535 GSTTP1A0A1W2PQM5 241 aa13.84□□□□□ -0.19
TNFAIP1-203ENST00000577535 MEIS1O00470 390 aa13.84□□□□□ -0.19
TNFAIP1-203ENST00000577535 TREHO43280 583 aa13.84□□□□□ -0.19
TNFAIP1-203ENST00000577535 CXCL10P02778 98 aa13.84□□□□□ -0.19
TNFAIP1-203ENST00000577535 THPOP40225 353 aa13.84□□□□□ -0.19
TNFAIP1-203ENST00000577535 TOB2Q14106 344 aaPredicted RBP13.84□□□□□ -0.19
TNFAIP1-203ENST00000577535 GPNMBQ14956 572 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms