RNA–Protein interactions for RNA: ENST00000577085.1

SF3B3-215, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-215ENST00000577085 SENP7Q9BQF6 1050 aa17.76■□□□□ 0.43
SF3B3-215ENST00000577085 BARHL2Q9NY43 387 aa17.76■□□□□ 0.43
SF3B3-215ENST00000577085 CXXC1Q9P0U4 656 aaPredicted RBP17.76■□□□□ 0.43
SF3B3-215ENST00000577085 CYP46A1Q9Y6A2 500 aa17.76■□□□□ 0.43
SF3B3-215ENST00000577085 MYH7BA7E2Y1 1941 aa17.75■□□□□ 0.43
SF3B3-215ENST00000577085 GRXCR1A8MXD5 290 aa17.75■□□□□ 0.43
SF3B3-215ENST00000577085 STXBP3O00186 592 aa17.75■□□□□ 0.43
SF3B3-215ENST00000577085 HAS3O00219 553 aa17.75■□□□□ 0.43
SF3B3-215ENST00000577085 FOSP01100 380 aaPredicted RBP17.75■□□□□ 0.43
SF3B3-215ENST00000577085 SELPP16109 830 aa17.75■□□□□ 0.43
SF3B3-215ENST00000577085 FUT2Q10981 343 aa17.75■□□□□ 0.43
SF3B3-215ENST00000577085 PTK7Q13308 1070 aa17.75■□□□□ 0.43
SF3B3-215ENST00000577085 UTP14CQ5TAP6 766 aaKnown RBP17.75■□□□□ 0.43
SF3B3-215ENST00000577085 SLC17A8Q8NDX2 589 aa17.75■□□□□ 0.43
SF3B3-215ENST00000577085 CDX2Q99626 313 aaPredicted RBP17.75■□□□□ 0.43
SF3B3-215ENST00000577085 GPR20Q99678 358 aa17.75■□□□□ 0.43
SF3B3-215ENST00000577085 C16orf70Q9BSU1 422 aa17.75■□□□□ 0.43
SF3B3-215ENST00000577085 PBX4Q9BYU1 374 aa17.75■□□□□ 0.43
SF3B3-215ENST00000577085 PKD2L1Q9P0L9 805 aa17.75■□□□□ 0.43
SF3B3-215ENST00000577085 C17orf102A2RUQ5 167 aa17.74■□□□□ 0.43
SF3B3-215ENST00000577085 MAFGO15525 162 aa17.74■□□□□ 0.43
SF3B3-215ENST00000577085 PARNO95453 639 aaKnown RBP17.74■□□□□ 0.43
SF3B3-215ENST00000577085 GNAT1P11488 350 aa17.74■□□□□ 0.43
SF3B3-215ENST00000577085 SCG2P13521 617 aa17.74■□□□□ 0.43
SF3B3-215ENST00000577085 ITGB5P18084 799 aa17.74■□□□□ 0.43
SF3B3-215ENST00000577085 SEMA3FQ13275 785 aa17.74■□□□□ 0.43
SF3B3-215ENST00000577085 RUFY3Q7L099 469 aa17.74■□□□□ 0.43
SF3B3-215ENST00000577085 LRRC8DQ7L1W4 858 aa17.74■□□□□ 0.43
SF3B3-215ENST00000577085 TTYH1Q9H313 450 aaPredicted RBP17.74■□□□□ 0.43
SF3B3-215ENST00000577085 ZNF576Q9H609 170 aa17.74■□□□□ 0.43
SF3B3-215ENST00000577085 BCAS3Q9H6U6 928 aa17.74■□□□□ 0.43
SF3B3-215ENST00000577085 FAM217BQ9NTX9 383 aaPredicted RBP17.74■□□□□ 0.43
SF3B3-215ENST00000577085 CKBP12277 381 aa17.73■□□□□ 0.43
SF3B3-215ENST00000577085 ATP2A2P16615 1042 aaKnown RBP17.73■□□□□ 0.43
SF3B3-215ENST00000577085 ZNF76P36508 570 aa17.73■□□□□ 0.43
SF3B3-215ENST00000577085 PBX2P40425 430 aa17.73■□□□□ 0.43
SF3B3-215ENST00000577085 AP3B2Q13367 1082 aa17.73■□□□□ 0.43
SF3B3-215ENST00000577085 PFKFB3Q16875 520 aaPredicted RBP17.73■□□□□ 0.43
SF3B3-215ENST00000577085 FBXL16Q8N461 479 aa17.73■□□□□ 0.43
SF3B3-215ENST00000577085 ATP6V0A1Q93050 837 aa17.73■□□□□ 0.43
SF3B3-215ENST00000577085 ANO3Q9BYT9 981 aa17.73■□□□□ 0.43
SF3B3-215ENST00000577085 JADE2Q9NQC1 790 aa17.73■□□□□ 0.43
SF3B3-215ENST00000577085 UBIAD1Q9Y5Z9 338 aa17.73■□□□□ 0.43
SF3B3-215ENST00000577085 SMIM10L2AP0DMW4 78 aa17.72■□□□□ 0.43
SF3B3-215ENST00000577085 SMIM10L2BP0DMW5 78 aa17.72■□□□□ 0.43
SF3B3-215ENST00000577085 FOSL2P15408 326 aa17.72■□□□□ 0.43
SF3B3-215ENST00000577085 TCF7P36402 384 aaPredicted RBP17.72■□□□□ 0.43
SF3B3-215ENST00000577085 THPOP40225 353 aa17.72■□□□□ 0.43
SF3B3-215ENST00000577085 KCNJ6P48051 423 aa17.72■□□□□ 0.43
SF3B3-215ENST00000577085 TYW1BQ6NUM6 668 aa17.72■□□□□ 0.43
SF3B3-215ENST00000577085 MYLIPQ8WY64 445 aa17.72■□□□□ 0.43
SF3B3-215ENST00000577085 GLG1Q92896 1179 aa17.72■□□□□ 0.43
SF3B3-215ENST00000577085 PGBD1Q96JS3 809 aa17.72■□□□□ 0.43
SF3B3-215ENST00000577085 SDF4Q9BRK5 362 aa17.72■□□□□ 0.43
SF3B3-215ENST00000577085 SLC28A3Q9HAS3 691 aa17.72■□□□□ 0.43
SF3B3-215ENST00000577085 C6orf50Q9HD87 102 aa17.72■□□□□ 0.43
SF3B3-215ENST00000577085 PRPF3O43395 683 aaKnown RBP17.71■□□□□ 0.43
SF3B3-215ENST00000577085 ATP9AO75110 1047 aa17.71■□□□□ 0.43
SF3B3-215ENST00000577085 BAIAP3O94812 1187 aa17.71■□□□□ 0.43
SF3B3-215ENST00000577085 KCNA2P16389 499 aa17.71■□□□□ 0.43
SF3B3-215ENST00000577085 GNA11P29992 359 aa17.71■□□□□ 0.43
SF3B3-215ENST00000577085 CCT2P78371 535 aaKnown RBP17.71■□□□□ 0.43
SF3B3-215ENST00000577085 ZNF200P98182 395 aaPredicted RBP17.71■□□□□ 0.43
SF3B3-215ENST00000577085 MCTP2Q6DN12 878 aa17.71■□□□□ 0.43
SF3B3-215ENST00000577085 TRIM50Q86XT4 487 aa17.71■□□□□ 0.43
SF3B3-215ENST00000577085 TRIM22Q8IYM9 498 aa17.71■□□□□ 0.43
SF3B3-215ENST00000577085 SEPT1Q8WYJ6 367 aa17.71■□□□□ 0.43
SF3B3-215ENST00000577085 DHX38Q92620 1227 aaKnown RBP17.71■□□□□ 0.43
SF3B3-215ENST00000577085 PHKBQ93100 1093 aa17.71■□□□□ 0.43
SF3B3-215ENST00000577085 CTAGE1Q96RT6 745 aa17.71■□□□□ 0.43
SF3B3-215ENST00000577085 MXRA8Q9BRK3 442 aa17.71■□□□□ 0.43
SF3B3-215ENST00000577085 SLC26A6Q9BXS9 759 aa17.71■□□□□ 0.43
SF3B3-215ENST00000577085 ZSWIM6Q9HCJ5 1215 aa17.71■□□□□ 0.43
SF3B3-215ENST00000577085 JPH1Q9HDC5 661 aaPredicted RBP17.71■□□□□ 0.43
SF3B3-215ENST00000577085 NID2Q14112 1375 aa17.7■□□□□ 0.42
SF3B3-215ENST00000577085 CPLX1O14810 134 aa17.7■□□□□ 0.42
SF3B3-215ENST00000577085 PDIA3P30101 505 aaKnown RBP17.7■□□□□ 0.42
SF3B3-215ENST00000577085 RABGGTBP53611 331 aa17.7■□□□□ 0.42
SF3B3-215ENST00000577085 RBL2Q08999 1139 aa17.7■□□□□ 0.42
SF3B3-215ENST00000577085 CEP55Q53EZ4 464 aa17.7■□□□□ 0.42
SF3B3-215ENST00000577085 JAKMIP3Q5VZ66 844 aa17.7■□□□□ 0.42
SF3B3-215ENST00000577085 SERINC5Q86VE9 423 aa17.7■□□□□ 0.42
SF3B3-215ENST00000577085 CCDC148Q8NFR7 591 aa17.7■□□□□ 0.42
SF3B3-215ENST00000577085 BICD2Q8TD16 824 aa17.7■□□□□ 0.42
SF3B3-215ENST00000577085 SLC9A7Q96T83 725 aa17.7■□□□□ 0.42
SF3B3-215ENST00000577085 AGXT2Q9BYV1 514 aa17.7■□□□□ 0.42
SF3B3-215ENST00000577085 NKX2-4Q9H2Z4 354 aa17.7■□□□□ 0.42
SF3B3-215ENST00000577085 KCNH7Q9NS40 1196 aa17.7■□□□□ 0.42
SF3B3-215ENST00000577085 TMEM260Q9NX78 707 aa17.7■□□□□ 0.42
SF3B3-215ENST00000577085 ERAP1Q9NZ08 941 aa17.7■□□□□ 0.42
SF3B3-215ENST00000577085 EMSYQ7Z589 1322 aa17.7■□□□□ 0.42
SF3B3-215ENST00000577085 TANC1Q9C0D5 1861 aa17.69■□□□□ 0.42
SF3B3-215ENST00000577085 KIF28PB7ZC32 967 aa17.69■□□□□ 0.42
SF3B3-215ENST00000577085 EIF5BO60841 1220 aaKnown RBP17.69■□□□□ 0.42
SF3B3-215ENST00000577085 SREBF1P36956 1147 aa17.69■□□□□ 0.42
SF3B3-215ENST00000577085 ARHGAP4P98171 946 aa17.69■□□□□ 0.42
SF3B3-215ENST00000577085 GRIN2CQ14957 1233 aa17.69■□□□□ 0.42
SF3B3-215ENST00000577085 ZNF618Q5T7W0 954 aa17.69■□□□□ 0.42
SF3B3-215ENST00000577085 PPP2R2DQ66LE6 453 aa17.69■□□□□ 0.42
SF3B3-215ENST00000577085 CNKSR3Q6P9H4 555 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms