RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 CCDC155Q8N6L0 562 aa17.4■□□□□ 0.38
SMG6-220ENST00000576218 SENP7Q9BQF6 1050 aa17.4■□□□□ 0.38
SMG6-220ENST00000576218 MXRA8Q9BRK3 442 aa17.4■□□□□ 0.38
SMG6-220ENST00000576218 SDF4Q9BRK5 362 aa17.4■□□□□ 0.38
SMG6-220ENST00000576218 SH3GLB2Q9NR46 395 aa17.4■□□□□ 0.38
SMG6-220ENST00000576218 TCEAL9Q9UHQ7 104 aa17.4■□□□□ 0.38
SMG6-220ENST00000576218 UBIAD1Q9Y5Z9 338 aa17.4■□□□□ 0.38
SMG6-220ENST00000576218 MYH7BA7E2Y1 1941 aa17.4■□□□□ 0.38
SMG6-220ENST00000576218 MAFGO15525 162 aa17.39■□□□□ 0.37
SMG6-220ENST00000576218 PFKFB2O60825 505 aa17.39■□□□□ 0.37
SMG6-220ENST00000576218 F2P00734 622 aa17.39■□□□□ 0.37
SMG6-220ENST00000576218 LGALS2P05162 132 aa17.39■□□□□ 0.37
SMG6-220ENST00000576218 CLK2P49760 499 aaKnown RBP17.39■□□□□ 0.37
SMG6-220ENST00000576218 CCL23P55773 120 aa17.39■□□□□ 0.37
SMG6-220ENST00000576218 CEP55Q53EZ4 464 aa17.39■□□□□ 0.37
SMG6-220ENST00000576218 RETREG2Q8NC44 543 aa17.39■□□□□ 0.37
SMG6-220ENST00000576218 RNPC3Q96LT9 517 aaKnown RBP17.39■□□□□ 0.37
SMG6-220ENST00000576218 H3BRB1 525 aa17.38■□□□□ 0.37
SMG6-220ENST00000576218 CSF2RAP15509 400 aa17.38■□□□□ 0.37
SMG6-220ENST00000576218 BFSP2Q13515 415 aa17.38■□□□□ 0.37
SMG6-220ENST00000576218 RASGRP4Q8TDF6 673 aa17.38■□□□□ 0.37
SMG6-220ENST00000576218 WASF1Q92558 559 aa17.38■□□□□ 0.37
SMG6-220ENST00000576218 KAT2BQ92831 832 aa17.38■□□□□ 0.37
SMG6-220ENST00000576218 GPR20Q99678 358 aa17.38■□□□□ 0.37
SMG6-220ENST00000576218 NOC4LQ9BVI4 516 aaKnown RBP17.38■□□□□ 0.37
SMG6-220ENST00000576218 C22orf23Q9BZE7 217 aa17.38■□□□□ 0.37
SMG6-220ENST00000576218 TUT1Q9H6E5 874 aaKnown RBP17.38■□□□□ 0.37
SMG6-220ENST00000576218 BCAS3Q9H6U6 928 aa17.38■□□□□ 0.37
SMG6-220ENST00000576218 JPH1Q9HDC5 661 aaPredicted RBP17.38■□□□□ 0.37
SMG6-220ENST00000576218 KCNH7Q9NS40 1196 aa17.38■□□□□ 0.37
SMG6-220ENST00000576218 HDAC6Q9UBN7 1215 aa17.38■□□□□ 0.37
SMG6-220ENST00000576218 SCN10AQ9Y5Y9 1956 aa17.38■□□□□ 0.37
SMG6-220ENST00000576218 ATP9AO75110 1047 aa17.37■□□□□ 0.37
SMG6-220ENST00000576218 KCNA2P16389 499 aa17.37■□□□□ 0.37
SMG6-220ENST00000576218 SHHQ15465 462 aa17.37■□□□□ 0.37
SMG6-220ENST00000576218 PSRC1Q6PGN9 363 aaPredicted RBP17.37■□□□□ 0.37
SMG6-220ENST00000576218 PLA2G4DQ86XP0 818 aa17.37■□□□□ 0.37
SMG6-220ENST00000576218 GLG1Q92896 1179 aa17.37■□□□□ 0.37
SMG6-220ENST00000576218 GTF2IRD1Q9UHL9 959 aa17.37■□□□□ 0.37
SMG6-220ENST00000576218 UMODL1Q5DID0 1318 aa17.37■□□□□ 0.37
SMG6-220ENST00000576218 C17orf102A2RUQ5 167 aa17.36■□□□□ 0.37
SMG6-220ENST00000576218 DDX39AO00148 427 aaKnown RBP17.36■□□□□ 0.37
SMG6-220ENST00000576218 HOXD8P13378 290 aaPredicted RBP17.36■□□□□ 0.37
SMG6-220ENST00000576218 TCF7P36402 384 aaPredicted RBP17.36■□□□□ 0.37
SMG6-220ENST00000576218 SETQ01105 290 aaPredicted RBP17.36■□□□□ 0.37
SMG6-220ENST00000576218 LRIT3Q3SXY7 679 aa17.36■□□□□ 0.37
SMG6-220ENST00000576218 C9orf50Q5SZB4 431 aa17.36■□□□□ 0.37
SMG6-220ENST00000576218 GDF6Q6KF10 455 aaPredicted RBP17.36■□□□□ 0.37
SMG6-220ENST00000576218 SESTD1Q86VW0 696 aa17.36■□□□□ 0.37
SMG6-220ENST00000576218 NECAB1Q8N987 351 aa17.36■□□□□ 0.37
SMG6-220ENST00000576218 CYP2W1Q8TAV3 490 aa17.36■□□□□ 0.37
SMG6-220ENST00000576218 SEPT1Q8WYJ6 367 aa17.36■□□□□ 0.37
SMG6-220ENST00000576218 MTIF3Q9H2K0 278 aaKnown RBP17.36■□□□□ 0.37
SMG6-220ENST00000576218 AZI2Q9H6S1 392 aa17.36■□□□□ 0.37
SMG6-220ENST00000576218 ORC3Q9UBD5 711 aaPredicted RBP17.36■□□□□ 0.37
SMG6-220ENST00000576218 SLC9A2Q9UBY0 812 aa17.36■□□□□ 0.37
SMG6-220ENST00000576218 PCDHA4Q9UN74 947 aa17.36■□□□□ 0.37
SMG6-220ENST00000576218 RANBP2P49792 3224 aaKnown RBP17.35■□□□□ 0.37
SMG6-220ENST00000576218 ACRP10323 421 aa17.35■□□□□ 0.37
SMG6-220ENST00000576218 ME3Q16798 604 aa17.35■□□□□ 0.37
SMG6-220ENST00000576218 TRIM50Q86XT4 487 aa17.35■□□□□ 0.37
SMG6-220ENST00000576218 RPUSD2Q8IZ73 545 aaKnown RBP17.35■□□□□ 0.37
SMG6-220ENST00000576218 BLIDQ8IZY5 108 aa17.35■□□□□ 0.37
SMG6-220ENST00000576218 GTF3C6Q969F1 213 aa17.35■□□□□ 0.37
SMG6-220ENST00000576218 IL17RAQ96F46 866 aa17.35■□□□□ 0.37
SMG6-220ENST00000576218 SCLYQ96I15 445 aa17.35■□□□□ 0.37
SMG6-220ENST00000576218 LRCH3Q96II8 777 aa17.35■□□□□ 0.37
SMG6-220ENST00000576218 AIFM3Q96NN9 605 aa17.35■□□□□ 0.37
SMG6-220ENST00000576218 ZNF577Q9BSK1 485 aa17.35■□□□□ 0.37
SMG6-220ENST00000576218 C16orf70Q9BSU1 422 aa17.35■□□□□ 0.37
SMG6-220ENST00000576218 BRMS1Q9HCU9 246 aa17.35■□□□□ 0.37
SMG6-220ENST00000576218 IL23AQ9NPF7 189 aa17.35■□□□□ 0.37
SMG6-220ENST00000576218 STK36Q9NRP7 1315 aa17.35■□□□□ 0.37
SMG6-220ENST00000576218 HAS3O00219 553 aa17.34■□□□□ 0.37
SMG6-220ENST00000576218 SOX1O00570 391 aaPredicted RBP17.34■□□□□ 0.37
SMG6-220ENST00000576218 SMIM10L2AP0DMW4 78 aa17.34■□□□□ 0.37
SMG6-220ENST00000576218 SMIM10L2BP0DMW5 78 aa17.34■□□□□ 0.37
SMG6-220ENST00000576218 ARP10275 920 aa17.34■□□□□ 0.37
SMG6-220ENST00000576218 GNAT1P11488 350 aa17.34■□□□□ 0.37
SMG6-220ENST00000576218 EPHB4P54760 987 aa17.34■□□□□ 0.37
SMG6-220ENST00000576218 TRIM29Q14134 588 aa17.34■□□□□ 0.37
SMG6-220ENST00000576218 PRR16Q569H4 304 aa17.34■□□□□ 0.37
SMG6-220ENST00000576218 GALNT17Q6IS24 598 aa17.34■□□□□ 0.37
SMG6-220ENST00000576218 NIPA1Q7RTP0 329 aa17.34■□□□□ 0.37
SMG6-220ENST00000576218 DEFB128Q7Z7B8 93 aa17.34■□□□□ 0.37
SMG6-220ENST00000576218 FAM177A1Q8N128 213 aaPredicted RBP17.34■□□□□ 0.37
SMG6-220ENST00000576218 CAGE1Q8TC20 777 aa17.34■□□□□ 0.37
SMG6-220ENST00000576218 WNT8AQ9H1J5 351 aa17.34■□□□□ 0.37
SMG6-220ENST00000576218 DOCK5Q9H7D0 1870 aa17.34■□□□□ 0.37
SMG6-220ENST00000576218 AGO4Q9HCK5 861 aaKnown RBP17.34■□□□□ 0.37
SMG6-220ENST00000576218 NFASCO94856 1347 aa17.33■□□□□ 0.36
SMG6-220ENST00000576218 CCDC194A0A1B0GVG4 234 aa17.33■□□□□ 0.36
SMG6-220ENST00000576218 ZBBXA8MT70 800 aa17.33■□□□□ 0.36
SMG6-220ENST00000576218 MEIS1O00470 390 aa17.33■□□□□ 0.36
SMG6-220ENST00000576218 PITPNM1O00562 1244 aa17.33■□□□□ 0.36
SMG6-220ENST00000576218 BACH1O14867 736 aa17.33■□□□□ 0.36
SMG6-220ENST00000576218 LARGE1O95461 756 aa17.33■□□□□ 0.36
SMG6-220ENST00000576218 FGBP02675 491 aa17.33■□□□□ 0.36
SMG6-220ENST00000576218 CYP3A4P08684 503 aa17.33■□□□□ 0.36
SMG6-220ENST00000576218 MARK3P27448 753 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms