RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 ORC2Q13416 577 aaPredicted RBP15.84■□□□□ 0.13
RPAIN-217ENST00000575711 LRRC41Q15345 812 aa15.84■□□□□ 0.13
RPAIN-217ENST00000575711 FSCN1Q16658 493 aaKnown RBP15.84■□□□□ 0.13
RPAIN-217ENST00000575711 RILPL1Q5EBL4 403 aa15.84■□□□□ 0.13
RPAIN-217ENST00000575711 TTC38Q5R3I4 469 aa15.84■□□□□ 0.13
RPAIN-217ENST00000575711 MYSM1Q5VVJ2 828 aa15.84■□□□□ 0.13
RPAIN-217ENST00000575711 METTL7BQ6UX53 244 aa15.84■□□□□ 0.13
RPAIN-217ENST00000575711 CYFIP1Q7L576 1253 aa15.84■□□□□ 0.13
RPAIN-217ENST00000575711 SPATA33Q96N06 139 aa15.84■□□□□ 0.13
RPAIN-217ENST00000575711 ZSCAN16Q9H4T2 348 aaPredicted RBP15.84■□□□□ 0.13
RPAIN-217ENST00000575711 TCEAL9Q9UHQ7 104 aa15.84■□□□□ 0.13
RPAIN-217ENST00000575711 NFASCO94856 1347 aa15.84■□□□□ 0.13
RPAIN-217ENST00000575711 MYADML2A6NDP7 307 aa15.83■□□□□ 0.12
RPAIN-217ENST00000575711 KBTBD13C9JR72 458 aa15.83■□□□□ 0.12
RPAIN-217ENST00000575711 DNM1LO00429 736 aa15.83■□□□□ 0.12
RPAIN-217ENST00000575711 NOP56O00567 594 aaKnown RBP15.83■□□□□ 0.12
RPAIN-217ENST00000575711 WNT7AO00755 349 aa15.83■□□□□ 0.12
RPAIN-217ENST00000575711 MSH4O15457 936 aa15.83■□□□□ 0.12
RPAIN-217ENST00000575711 CST5P28325 142 aaPredicted RBP15.83■□□□□ 0.12
RPAIN-217ENST00000575711 MCM7P33993 719 aa15.83■□□□□ 0.12
RPAIN-217ENST00000575711 RESTQ13127 1097 aa15.83■□□□□ 0.12
RPAIN-217ENST00000575711 ITGB3BPQ13352 177 aaPredicted RBP15.83■□□□□ 0.12
RPAIN-217ENST00000575711 GNASQ5JWF2 1037 aa15.83■□□□□ 0.12
RPAIN-217ENST00000575711 ANKLE1Q8NAG6 615 aa15.83■□□□□ 0.12
RPAIN-217ENST00000575711 PCSK9Q8NBP7 692 aaKnown RBP15.83■□□□□ 0.12
RPAIN-217ENST00000575711 KLHDC9Q8NEP7 349 aa15.83■□□□□ 0.12
RPAIN-217ENST00000575711 PPTC7Q8NI37 304 aa15.83■□□□□ 0.12
RPAIN-217ENST00000575711 AFG1LQ8WV93 481 aa15.83■□□□□ 0.12
RPAIN-217ENST00000575711 UIMC1Q96RL1 719 aa15.83■□□□□ 0.12
RPAIN-217ENST00000575711 JPH1Q9HDC5 661 aaPredicted RBP15.83■□□□□ 0.12
RPAIN-217ENST00000575711 TBC1D22BQ9NU19 505 aa15.83■□□□□ 0.12
RPAIN-217ENST00000575711 A6NJR5 290 aa15.82■□□□□ 0.12
RPAIN-217ENST00000575711 TBX3O15119 743 aa15.82■□□□□ 0.12
RPAIN-217ENST00000575711 CTAGE5O15320 804 aa15.82■□□□□ 0.12
RPAIN-217ENST00000575711 BAG4O95429 457 aaKnown RBP15.82■□□□□ 0.12
RPAIN-217ENST00000575711 ZSCAN22P10073 491 aaPredicted RBP15.82■□□□□ 0.12
RPAIN-217ENST00000575711 EN2P19622 333 aaPredicted RBP15.82■□□□□ 0.12
RPAIN-217ENST00000575711 TOB1P50616 345 aaPredicted RBP15.82■□□□□ 0.12
RPAIN-217ENST00000575711 SOX10P56693 466 aa15.82■□□□□ 0.12
RPAIN-217ENST00000575711 IRX5P78411 483 aaPredicted RBP15.82■□□□□ 0.12
RPAIN-217ENST00000575711 BEX3Q00994 111 aa15.82■□□□□ 0.12
RPAIN-217ENST00000575711 SP4Q02446 784 aa15.82■□□□□ 0.12
RPAIN-217ENST00000575711 ZNF174Q15697 407 aa15.82■□□□□ 0.12
RPAIN-217ENST00000575711 CALCRLQ16602 461 aa15.82■□□□□ 0.12
RPAIN-217ENST00000575711 HSDL1Q3SXM5 330 aa15.82■□□□□ 0.12
RPAIN-217ENST00000575711 ETNPPLQ8TBG4 499 aa15.82■□□□□ 0.12
RPAIN-217ENST00000575711 SLC5A5Q92911 643 aa15.82■□□□□ 0.12
RPAIN-217ENST00000575711 FAM20AQ96MK3 541 aa15.82■□□□□ 0.12
RPAIN-217ENST00000575711 RIT2Q99578 217 aa15.82■□□□□ 0.12
RPAIN-217ENST00000575711 BCAS3Q9H6U6 928 aa15.82■□□□□ 0.12
RPAIN-217ENST00000575711 KCNMB3Q9NPA1 279 aa15.82■□□□□ 0.12
RPAIN-217ENST00000575711 SLC9A2Q9UBY0 812 aa15.82■□□□□ 0.12
RPAIN-217ENST00000575711 DDX39AO00148 427 aaKnown RBP15.81■□□□□ 0.12
RPAIN-217ENST00000575711 GAS7O60861 476 aa15.81■□□□□ 0.12
RPAIN-217ENST00000575711 MMP3P08254 477 aa15.81■□□□□ 0.12
RPAIN-217ENST00000575711 PKP1Q13835 747 aa15.81■□□□□ 0.12
RPAIN-217ENST00000575711 NBR1Q14596 966 aa15.81■□□□□ 0.12
RPAIN-217ENST00000575711 KCNA10Q16322 511 aa15.81■□□□□ 0.12
RPAIN-217ENST00000575711 LRCH2Q5VUJ6 765 aa15.81■□□□□ 0.12
RPAIN-217ENST00000575711 FOXD4L5Q5VV16 416 aaPredicted RBP15.81■□□□□ 0.12
RPAIN-217ENST00000575711 SLFN12Q8IYM2 578 aa15.81■□□□□ 0.12
RPAIN-217ENST00000575711 FOXD4L4Q8WXT5 416 aaPredicted RBP15.81■□□□□ 0.12
RPAIN-217ENST00000575711 TSEN34Q9BSV6 310 aaKnown RBP15.81■□□□□ 0.12
RPAIN-217ENST00000575711 TEKT3Q9BXF9 490 aa15.81■□□□□ 0.12
RPAIN-217ENST00000575711 PCDHB6Q9Y5E3 794 aa15.81■□□□□ 0.12
RPAIN-217ENST00000575711 FRMPD3Q5JV73 1810 aa15.8■□□□□ 0.12
RPAIN-217ENST00000575711 MOXD2PA6NHM9 499 aa15.8■□□□□ 0.12
RPAIN-217ENST00000575711 DHX15O43143 795 aaKnown RBP15.8■□□□□ 0.12
RPAIN-217ENST00000575711 KPNA6O60684 536 aa15.8■□□□□ 0.12
RPAIN-217ENST00000575711 F13A1P00488 732 aa15.8■□□□□ 0.12
RPAIN-217ENST00000575711 MYL3P08590 195 aa15.8■□□□□ 0.12
RPAIN-217ENST00000575711 KRT76Q01546 638 aa15.8■□□□□ 0.12
RPAIN-217ENST00000575711 DGKDQ16760 1214 aa15.8■□□□□ 0.12
RPAIN-217ENST00000575711 CCSAPQ6IQ19 270 aaPredicted RBP15.8■□□□□ 0.12
RPAIN-217ENST00000575711 SEPT1Q8WYJ6 367 aa15.8■□□□□ 0.12
RPAIN-217ENST00000575711 GJA10Q969M2 543 aa15.8■□□□□ 0.12
RPAIN-217ENST00000575711 GPR20Q99678 358 aa15.8■□□□□ 0.12
RPAIN-217ENST00000575711 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.8■□□□□ 0.12
RPAIN-217ENST00000575711 POLR3EQ9NVU0 708 aa15.8■□□□□ 0.12
RPAIN-217ENST00000575711 ELP1O95163 1332 aa15.79■□□□□ 0.12
RPAIN-217ENST00000575711 PPFIA4O75335 1185 aa15.79■□□□□ 0.12
RPAIN-217ENST00000575711 PSMD10O75832 226 aa15.79■□□□□ 0.12
RPAIN-217ENST00000575711 BRD1O95696 1058 aa15.79■□□□□ 0.12
RPAIN-217ENST00000575711 ASGR1P07306 291 aa15.79■□□□□ 0.12
RPAIN-217ENST00000575711 OR52Z1P0C646 297 aa15.79■□□□□ 0.12
RPAIN-217ENST00000575711 ACLYP53396 1101 aa15.79■□□□□ 0.12
RPAIN-217ENST00000575711 ZNF746Q6NUN9 644 aaPredicted RBP15.79■□□□□ 0.12
RPAIN-217ENST00000575711 SMAP1Q8IYB5 467 aaPredicted RBP15.79■□□□□ 0.12
RPAIN-217ENST00000575711 HAS1Q92839 578 aa15.79■□□□□ 0.12
RPAIN-217ENST00000575711 MTMR9Q96QG7 549 aa15.79■□□□□ 0.12
RPAIN-217ENST00000575711 TMEM60Q9H2L4 133 aa15.79■□□□□ 0.12
RPAIN-217ENST00000575711 PHF24Q9UPV7 400 aa15.79■□□□□ 0.12
RPAIN-217ENST00000575711 BRCA2P51587 3418 aa15.79■□□□□ 0.12
RPAIN-217ENST00000575711 LAD1O00515 517 aa15.78■□□□□ 0.12
RPAIN-217ENST00000575711 CHMP2AO43633 222 aa15.78■□□□□ 0.12
RPAIN-217ENST00000575711 CABYRO75952 493 aa15.78■□□□□ 0.12
RPAIN-217ENST00000575711 HOXD8P13378 290 aaPredicted RBP15.78■□□□□ 0.12
RPAIN-217ENST00000575711 TCF7P36402 384 aaPredicted RBP15.78■□□□□ 0.12
RPAIN-217ENST00000575711 MNX1P50219 401 aaPredicted RBP15.78■□□□□ 0.12
RPAIN-217ENST00000575711 ACTR2P61160 394 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms