RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 CCND2P30279 289 aa10.46□□□□□ -0.73
SMG6-218ENST00000575454 CTNNB1P35222 781 aa10.46□□□□□ -0.73
SMG6-218ENST00000575454 IRS1P35568 1242 aa10.46□□□□□ -0.73
SMG6-218ENST00000575454 BMPR1AP36894 532 aa10.46□□□□□ -0.73
SMG6-218ENST00000575454 PTPN5P54829 565 aa10.46□□□□□ -0.73
SMG6-218ENST00000575454 SMAD4Q13485 552 aaKnown RBP10.46□□□□□ -0.73
SMG6-218ENST00000575454 GNPTABQ3T906 1256 aa10.46□□□□□ -0.73
SMG6-218ENST00000575454 BMP8AQ7Z5Y6 402 aa10.46□□□□□ -0.73
SMG6-218ENST00000575454 EDAQ92838 391 aa10.46□□□□□ -0.73
SMG6-218ENST00000575454 FAM227BQ96M60 508 aa10.46□□□□□ -0.73
SMG6-218ENST00000575454 ZSCAN10Q96SZ4 725 aaPredicted RBP10.46□□□□□ -0.73
SMG6-218ENST00000575454 PLVAPQ9BX97 442 aa10.46□□□□□ -0.73
SMG6-218ENST00000575454 CPVLQ9H3G5 476 aa10.46□□□□□ -0.73
SMG6-218ENST00000575454 JMJD4Q9H9V9 463 aa10.46□□□□□ -0.73
SMG6-218ENST00000575454 VAT1LQ9HCJ6 419 aa10.46□□□□□ -0.73
SMG6-218ENST00000575454 ZNF215Q9UL58 517 aaPredicted RBP10.46□□□□□ -0.73
SMG6-218ENST00000575454 GBF1Q92538 1859 aa10.46□□□□□ -0.74
SMG6-218ENST00000575454 SCN10AQ9Y5Y9 1956 aa10.45□□□□□ -0.74
SMG6-218ENST00000575454 CCDC171Q6TFL3 1326 aa10.45□□□□□ -0.74
SMG6-218ENST00000575454 A0A0D9SFI3 127 aa10.45□□□□□ -0.74
SMG6-218ENST00000575454 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.45□□□□□ -0.74
SMG6-218ENST00000575454 TRIM6-TRIM34B2RNG4 842 aa10.45□□□□□ -0.74
SMG6-218ENST00000575454 GCOM1H8Y6P7 765 aaPredicted RBP10.45□□□□□ -0.74
SMG6-218ENST00000575454 TREHO43280 583 aa10.45□□□□□ -0.74
SMG6-218ENST00000575454 STAM2O75886 525 aa10.45□□□□□ -0.74
SMG6-218ENST00000575454 LGALS2P05162 132 aa10.45□□□□□ -0.74
SMG6-218ENST00000575454 CTSHP09668 335 aa10.45□□□□□ -0.74
SMG6-218ENST00000575454 POLR2MP0CAP2 368 aa10.45□□□□□ -0.74
SMG6-218ENST00000575454 LTBRP36941 435 aa10.45□□□□□ -0.74
SMG6-218ENST00000575454 NEDD9Q14511 834 aa10.45□□□□□ -0.74
SMG6-218ENST00000575454 HIC1Q14526 733 aa10.45□□□□□ -0.74
SMG6-218ENST00000575454 NAALADL2Q58DX5 795 aa10.45□□□□□ -0.74
SMG6-218ENST00000575454 FAM26DQ5JW98 314 aa10.45□□□□□ -0.74
SMG6-218ENST00000575454 ANKRD45Q5TZF3 282 aa10.45□□□□□ -0.74
SMG6-218ENST00000575454 RSPH3Q86UC2 560 aa10.45□□□□□ -0.74
SMG6-218ENST00000575454 TBC1D10CQ8IV04 446 aa10.45□□□□□ -0.74
SMG6-218ENST00000575454 ZKSCAN3Q9BRR0 538 aa10.45□□□□□ -0.74
SMG6-218ENST00000575454 IRF2BPLQ9H1B7 796 aa10.45□□□□□ -0.74
SMG6-218ENST00000575454 RNPEPQ9H4A4 650 aa10.45□□□□□ -0.74
SMG6-218ENST00000575454 CD207Q9UJ71 328 aa10.45□□□□□ -0.74
SMG6-218ENST00000575454 PCDHA1Q9Y5I3 950 aa10.45□□□□□ -0.74
SMG6-218ENST00000575454 MYH8P13535 1937 aa10.45□□□□□ -0.74
SMG6-218ENST00000575454 SALL3Q9BXA9 1300 aa10.44□□□□□ -0.74
SMG6-218ENST00000575454 STXBP3O00186 592 aa10.44□□□□□ -0.74
SMG6-218ENST00000575454 ZBTB5O15062 677 aa10.44□□□□□ -0.74
SMG6-218ENST00000575454 MBTPS2O43462 519 aa10.44□□□□□ -0.74
SMG6-218ENST00000575454 ST18O60284 1047 aa10.44□□□□□ -0.74
SMG6-218ENST00000575454 KDM4AO75164 1064 aa10.44□□□□□ -0.74
SMG6-218ENST00000575454 RPLP2P05387 115 aaKnown RBP10.44□□□□□ -0.74
SMG6-218ENST00000575454 PDE1AP54750 535 aa10.44□□□□□ -0.74
SMG6-218ENST00000575454 SP2Q02086 613 aa10.44□□□□□ -0.74
SMG6-218ENST00000575454 HYAL1Q12794 435 aa10.44□□□□□ -0.74
SMG6-218ENST00000575454 NMIQ13287 307 aaPredicted RBP10.44□□□□□ -0.74
SMG6-218ENST00000575454 PGM5Q15124 567 aa10.44□□□□□ -0.74
SMG6-218ENST00000575454 TAF2Q6P1X5 1199 aa10.44□□□□□ -0.74
SMG6-218ENST00000575454 METTL7BQ6UX53 244 aa10.44□□□□□ -0.74
SMG6-218ENST00000575454 ZNF589Q86UQ0 364 aaPredicted RBP10.44□□□□□ -0.74
SMG6-218ENST00000575454 RNF135Q8IUD6 432 aa10.44□□□□□ -0.74
SMG6-218ENST00000575454 SUGP1Q8IWZ8 645 aaKnown RBP10.44□□□□□ -0.74
SMG6-218ENST00000575454 ENAHQ8N8S7 591 aaPredicted RBP10.44□□□□□ -0.74
SMG6-218ENST00000575454 CLP1Q92989 425 aaKnown RBP10.44□□□□□ -0.74
SMG6-218ENST00000575454 UBAC1Q9BSL1 405 aa10.44□□□□□ -0.74
SMG6-218ENST00000575454 SETD4Q9NVD3 440 aa10.44□□□□□ -0.74
SMG6-218ENST00000575454 MUTYHQ9UIF7 546 aa10.44□□□□□ -0.74
SMG6-218ENST00000575454 PCDHB15Q9Y5E8 787 aa10.44□□□□□ -0.74
SMG6-218ENST00000575454 ZFHX2Q9C0A1 2572 aaPredicted RBP10.44□□□□□ -0.74
SMG6-218ENST00000575454 NEDD4P46934 1319 aa10.43□□□□□ -0.74
SMG6-218ENST00000575454 ADGRA3Q8IWK6 1321 aa10.43□□□□□ -0.74
SMG6-218ENST00000575454 NRCAMQ92823 1304 aa10.43□□□□□ -0.74
SMG6-218ENST00000575454 KLRF2D3W0D1 207 aa10.43□□□□□ -0.74
SMG6-218ENST00000575454 GRM6O15303 877 aa10.43□□□□□ -0.74
SMG6-218ENST00000575454 SORBS3O60504 671 aa10.43□□□□□ -0.74
SMG6-218ENST00000575454 MMP1P03956 469 aa10.43□□□□□ -0.74
SMG6-218ENST00000575454 NDUFV1P49821 464 aa10.43□□□□□ -0.74
SMG6-218ENST00000575454 BTG3Q14201 252 aaPredicted RBP10.43□□□□□ -0.74
SMG6-218ENST00000575454 CLUL1Q15846 466 aa10.43□□□□□ -0.74
SMG6-218ENST00000575454 IFIT1BQ5T764 474 aaKnown RBP10.43□□□□□ -0.74
SMG6-218ENST00000575454 FAM43BQ6ZT52 329 aaPredicted RBP10.43□□□□□ -0.74
SMG6-218ENST00000575454 TRIM67Q6ZTA4 783 aa10.43□□□□□ -0.74
SMG6-218ENST00000575454 PBXIP1Q96AQ6 731 aa10.43□□□□□ -0.74
SMG6-218ENST00000575454 KRT23Q9C075 422 aa10.43□□□□□ -0.74
SMG6-218ENST00000575454 CNNM2Q9H8M5 875 aa10.43□□□□□ -0.74
SMG6-218ENST00000575454 FSD2A1L4K1 749 aa10.42□□□□□ -0.74
SMG6-218ENST00000575454 TMEM221A6NGB7 291 aa10.42□□□□□ -0.74
SMG6-218ENST00000575454 SPATA31C2B4DYI2 1134 aa10.42□□□□□ -0.74
SMG6-218ENST00000575454 M0R296 226 aa10.42□□□□□ -0.74
SMG6-218ENST00000575454 OPLAHO14841 1288 aa10.42□□□□□ -0.74
SMG6-218ENST00000575454 FIBPO43427 364 aa10.42□□□□□ -0.74
SMG6-218ENST00000575454 EYA4O95677 639 aa10.42□□□□□ -0.74
SMG6-218ENST00000575454 HOXA13P31271 388 aaPredicted RBP10.42□□□□□ -0.74
SMG6-218ENST00000575454 ICAM3P32942 547 aa10.42□□□□□ -0.74
SMG6-218ENST00000575454 ARHGAP4P98171 946 aa10.42□□□□□ -0.74
SMG6-218ENST00000575454 ADAM15Q13444 863 aa10.42□□□□□ -0.74
SMG6-218ENST00000575454 IMMTQ16891 758 aaKnown RBP10.42□□□□□ -0.74
SMG6-218ENST00000575454 XRRA1Q6P2D8 792 aa10.42□□□□□ -0.74
SMG6-218ENST00000575454 GIMAP8Q8ND71 665 aaPredicted RBP10.42□□□□□ -0.74
SMG6-218ENST00000575454 P2RX5Q93086 422 aa10.42□□□□□ -0.74
SMG6-218ENST00000575454 MTMR8Q96EF0 704 aa10.42□□□□□ -0.74
SMG6-218ENST00000575454 INPP4AQ96PE3 977 aaPredicted RBP10.42□□□□□ -0.74
SMG6-218ENST00000575454 GPR20Q99678 358 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms