RNA–Protein interactions for RNA: ENST00000575112.5

RPAIN-215, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 3,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-215ENST00000575112 NFU1Q9UMS0 254 aa9.39□□□□□ -0.91
RPAIN-215ENST00000575112 LEMD3Q9Y2U8 911 aa9.39□□□□□ -0.91
RPAIN-215ENST00000575112 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.39□□□□□ -0.91
RPAIN-215ENST00000575112 ITIH6Q6UXX5 1313 aa9.39□□□□□ -0.91
RPAIN-215ENST00000575112 EP400Q96L91 3159 aa9.39□□□□□ -0.91
RPAIN-215ENST00000575112 EBAG9O00559 213 aa9.39□□□□□ -0.91
RPAIN-215ENST00000575112 EIF3HO15372 352 aaKnown RBP eCLIP9.39□□□□□ -0.91
RPAIN-215ENST00000575112 PPIP5K2O43314 1243 aa9.39□□□□□ -0.91
RPAIN-215ENST00000575112 ACTN1P12814 892 aa9.39□□□□□ -0.91
RPAIN-215ENST00000575112 PLCG2P16885 1265 aa9.39□□□□□ -0.91
RPAIN-215ENST00000575112 PPP2R5BQ15173 497 aa9.39□□□□□ -0.91
RPAIN-215ENST00000575112 FAM133AQ8N9E0 248 aa9.39□□□□□ -0.91
RPAIN-215ENST00000575112 SPATA4Q8NEY3 305 aa9.39□□□□□ -0.91
RPAIN-215ENST00000575112 CYP2W1Q8TAV3 490 aa9.39□□□□□ -0.91
RPAIN-215ENST00000575112 TAF4BQ92750 862 aa9.39□□□□□ -0.91
RPAIN-215ENST00000575112 DUSP9Q99956 384 aaKnown RBP9.39□□□□□ -0.91
RPAIN-215ENST00000575112 NCAPGQ9BPX3 1015 aa9.39□□□□□ -0.91
RPAIN-215ENST00000575112 GBP3Q9H0R5 595 aa9.39□□□□□ -0.91
RPAIN-215ENST00000575112 PCIF1Q9H4Z3 704 aa9.39□□□□□ -0.91
RPAIN-215ENST00000575112 BCAS3Q9H6U6 928 aa9.39□□□□□ -0.91
RPAIN-215ENST00000575112 ARHGAP20Q9P2F6 1191 aa9.39□□□□□ -0.91
RPAIN-215ENST00000575112 HARSP12081 509 aaKnown RBP9.38□□□□□ -0.91
RPAIN-215ENST00000575112 EEF2P13639 858 aaKnown RBP9.38□□□□□ -0.91
RPAIN-215ENST00000575112 ATP2B4P23634 1241 aa9.38□□□□□ -0.91
RPAIN-215ENST00000575112 CDR1P51861 262 aa9.38□□□□□ -0.91
RPAIN-215ENST00000575112 CNNM4Q6P4Q7 775 aa9.38□□□□□ -0.91
RPAIN-215ENST00000575112 KCNK18Q7Z418 384 aa9.38□□□□□ -0.91
RPAIN-215ENST00000575112 MAATS1Q7Z4T9 603 aa9.38□□□□□ -0.91
RPAIN-215ENST00000575112 MYCT1Q8N699 235 aa9.38□□□□□ -0.91
RPAIN-215ENST00000575112 SECISBP2LQ93073 1101 aaKnown RBP9.38□□□□□ -0.91
RPAIN-215ENST00000575112 HAUS4Q9H6D7 363 aa9.38□□□□□ -0.91
RPAIN-215ENST00000575112 COL4A1P02462 1669 aa9.38□□□□□ -0.91
RPAIN-215ENST00000575112 SPEF2Q9C093 1822 aa9.38□□□□□ -0.91
RPAIN-215ENST00000575112 ZNF233A6NK53 670 aa9.38□□□□□ -0.91
RPAIN-215ENST00000575112 NDUFAB1O14561 156 aa9.38□□□□□ -0.91
RPAIN-215ENST00000575112 TACC1O75410 805 aa9.38□□□□□ -0.91
RPAIN-215ENST00000575112 ADAM9Q13443 819 aa9.38□□□□□ -0.91
RPAIN-215ENST00000575112 FAM26FQ5R3K3 315 aa9.38□□□□□ -0.91
RPAIN-215ENST00000575112 HAUS3Q68CZ6 603 aa9.38□□□□□ -0.91
RPAIN-215ENST00000575112 MCTP2Q6DN12 878 aa9.38□□□□□ -0.91
RPAIN-215ENST00000575112 CUL5Q93034 780 aa9.38□□□□□ -0.91
RPAIN-215ENST00000575112 MTMR8Q96EF0 704 aa9.38□□□□□ -0.91
RPAIN-215ENST00000575112 CSRNP1Q96S65 589 aa9.38□□□□□ -0.91
RPAIN-215ENST00000575112 TTYH3Q9C0H2 523 aa9.38□□□□□ -0.91
RPAIN-215ENST00000575112 BCL9LQ86UU0 1499 aa9.38□□□□□ -0.91
RPAIN-215ENST00000575112 BICDL2A1A5D9 508 aa9.38□□□□□ -0.91
RPAIN-215ENST00000575112 LGALS16A8MUM7 142 aa9.38□□□□□ -0.91
RPAIN-215ENST00000575112 ZBTB39O15060 712 aa9.38□□□□□ -0.91
RPAIN-215ENST00000575112 LRRN2O75325 713 aa9.38□□□□□ -0.91
RPAIN-215ENST00000575112 HPDP32754 393 aaPredicted RBP9.38□□□□□ -0.91
RPAIN-215ENST00000575112 KRT83P78385 493 aa9.38□□□□□ -0.91
RPAIN-215ENST00000575112 HDLBPQ00341 1268 aaKnown RBP9.38□□□□□ -0.91
RPAIN-215ENST00000575112 GRM4Q14833 912 aa9.38□□□□□ -0.91
RPAIN-215ENST00000575112 NSMFQ6X4W1 530 aa9.38□□□□□ -0.91
RPAIN-215ENST00000575112 TAX1BP1Q86VP1 789 aa9.38□□□□□ -0.91
RPAIN-215ENST00000575112 ELOA2Q8IYF1 753 aaPredicted RBP9.38□□□□□ -0.91
RPAIN-215ENST00000575112 ADSSL1Q8N142 457 aa9.38□□□□□ -0.91
RPAIN-215ENST00000575112 TBC1D5Q92609 795 aa9.38□□□□□ -0.91
RPAIN-215ENST00000575112 TRIM9Q9C026 710 aa9.38□□□□□ -0.91
RPAIN-215ENST00000575112 BHMT2Q9H2M3 363 aa9.38□□□□□ -0.91
RPAIN-215ENST00000575112 GJA3Q9Y6H8 435 aa9.38□□□□□ -0.91
RPAIN-215ENST00000575112 LRP6O75581 1613 aa9.38□□□□□ -0.91
RPAIN-215ENST00000575112 SLIT3O75094 1523 aa9.38□□□□□ -0.91
RPAIN-215ENST00000575112 FRMD3A2A2Y4 597 aa9.37□□□□□ -0.91
RPAIN-215ENST00000575112 KLRC4O43908 158 aa9.37□□□□□ -0.91
RPAIN-215ENST00000575112 ORC4O43929 436 aa9.37□□□□□ -0.91
RPAIN-215ENST00000575112 INPP5BP32019 993 aa9.37□□□□□ -0.91
RPAIN-215ENST00000575112 VIPAS39Q9H9C1 493 aa9.37□□□□□ -0.91
RPAIN-215ENST00000575112 CAPN11Q9UMQ6 739 aa9.37□□□□□ -0.91
RPAIN-215ENST00000575112 TAF1P21675 1872 aa9.37□□□□□ -0.91
RPAIN-215ENST00000575112 TLDC2A0PJX2 215 aa9.37□□□□□ -0.91
RPAIN-215ENST00000575112 LRRC53A6NM62 1247 aa9.37□□□□□ -0.91
RPAIN-215ENST00000575112 DNM2P50570 870 aa9.37□□□□□ -0.91
RPAIN-215ENST00000575112 KLHL30Q0D2K2 578 aa9.37□□□□□ -0.91
RPAIN-215ENST00000575112 SLC35G1Q2M3R5 365 aa9.37□□□□□ -0.91
RPAIN-215ENST00000575112 QRICH1Q2TAL8 776 aa9.37□□□□□ -0.91
RPAIN-215ENST00000575112 DDX42Q86XP3 938 aaKnown RBP eCLIP9.37□□□□□ -0.91
RPAIN-215ENST00000575112 FAM114A1Q8IWE2 563 aa9.37□□□□□ -0.91
RPAIN-215ENST00000575112 MYOCDQ8IZQ8 938 aa9.37□□□□□ -0.91
RPAIN-215ENST00000575112 CCDC51Q96ER9 411 aa9.37□□□□□ -0.91
RPAIN-215ENST00000575112 SH3GL2Q99962 352 aa9.37□□□□□ -0.91
RPAIN-215ENST00000575112 GEMIN8Q9NWZ8 242 aaKnown RBP9.37□□□□□ -0.91
RPAIN-215ENST00000575112 FAM184BQ9ULE4 1060 aa9.37□□□□□ -0.91
RPAIN-215ENST00000575112 FAM13AO94988 1023 aa9.37□□□□□ -0.91
RPAIN-215ENST00000575112 TTLL1O95922 423 aa9.37□□□□□ -0.91
RPAIN-215ENST00000575112 CPP00450 1065 aa9.37□□□□□ -0.91
RPAIN-215ENST00000575112 NNTQ13423 1086 aa9.37□□□□□ -0.91
RPAIN-215ENST00000575112 KIAA0753Q2KHM9 967 aa9.37□□□□□ -0.91
RPAIN-215ENST00000575112 MIIPQ5JXC2 388 aa9.37□□□□□ -0.91
RPAIN-215ENST00000575112 LARGE2Q8N3Y3 721 aa9.37□□□□□ -0.91
RPAIN-215ENST00000575112 NDST4Q9H3R1 872 aa9.37□□□□□ -0.91
RPAIN-215ENST00000575112 SNX12Q9UMY4 172 aa9.37□□□□□ -0.91
RPAIN-215ENST00000575112 FZD1Q9UP38 647 aa9.37□□□□□ -0.91
RPAIN-215ENST00000575112 PHRF1Q9P1Y6 1649 aaKnown RBP9.37□□□□□ -0.91
RPAIN-215ENST00000575112 DCDC2CA8MYV0 355 aa9.36□□□□□ -0.91
RPAIN-215ENST00000575112 CEP104O60308 925 aa9.36□□□□□ -0.91
RPAIN-215ENST00000575112 PDHBP11177 359 aa9.36□□□□□ -0.91
RPAIN-215ENST00000575112 GYS1P13807 737 aa9.36□□□□□ -0.91
RPAIN-215ENST00000575112 FNTAP49354 379 aa9.36□□□□□ -0.91
RPAIN-215ENST00000575112 TTI2Q6NXR4 508 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms