RNA–Protein interactions for RNA: ENST00000575009.5

SRRM2-222, Transcript of serine/arginine repetitive matrix 2, human

TSL 5

Gene SRRM2, Length 1,146 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRRM2-222	ENST00000575009	MFSD5	Q6N075	450 aa		29.9	■■■□□ 2.38
SRRM2-222	ENST00000575009	REXO1	Q8N1G1	1221 aa	Known RBP	29.9	■■■□□ 2.38
SRRM2-222	ENST00000575009	NECAB1	Q8N987	351 aa		29.9	■■■□□ 2.38
SRRM2-222	ENST00000575009	SENP7	Q9BQF6	1050 aa		29.9	■■■□□ 2.38
SRRM2-222	ENST00000575009	NOP56	O00567	594 aa	Known RBP	29.89	■■■□□ 2.38
SRRM2-222	ENST00000575009	DEXI	O95424	95 aa		29.89	■■■□□ 2.38
SRRM2-222	ENST00000575009	ME3	Q16798	604 aa		29.89	■■■□□ 2.38
SRRM2-222	ENST00000575009	KIAA0753	Q2KHM9	967 aa		29.89	■■■□□ 2.38
SRRM2-222	ENST00000575009	CPLX2	Q6PUV4	134 aa	Known RBP	29.89	■■■□□ 2.38
SRRM2-222	ENST00000575009	CCDC148	Q8NFR7	591 aa		29.89	■■■□□ 2.38
SRRM2-222	ENST00000575009	GPR20	Q99678	358 aa		29.89	■■■□□ 2.38
SRRM2-222	ENST00000575009	C16orf70	Q9BSU1	422 aa		29.89	■■■□□ 2.38
SRRM2-222	ENST00000575009	HAS3	O00219	553 aa		29.88	■■■□□ 2.37
SRRM2-222	ENST00000575009	CTDNEP1	O95476	244 aa		29.88	■■■□□ 2.37
SRRM2-222	ENST00000575009	LGALS2	P05162	132 aa		29.88	■■■□□ 2.37
SRRM2-222	ENST00000575009	GNA11	P29992	359 aa		29.88	■■■□□ 2.37
SRRM2-222	ENST00000575009	ARHGAP4	P98171	946 aa		29.88	■■■□□ 2.37
SRRM2-222	ENST00000575009	PTPN11	Q06124	597 aa	Predicted RBP	29.88	■■■□□ 2.37
SRRM2-222	ENST00000575009	GDF6	Q6KF10	455 aa	Predicted RBP	29.88	■■■□□ 2.37
SRRM2-222	ENST00000575009	LRCH3	Q96II8	777 aa		29.88	■■■□□ 2.37
SRRM2-222	ENST00000575009	CDHR1	Q96JP9	859 aa		29.88	■■■□□ 2.37
SRRM2-222	ENST00000575009	HDAC6	Q9UBN7	1215 aa		29.88	■■■□□ 2.37
SRRM2-222	ENST00000575009	TRIP12	Q14669	1992 aa	Predicted RBP	29.87	■■■□□ 2.37
SRRM2-222	ENST00000575009	AR	P10275	920 aa		29.87	■■■□□ 2.37
SRRM2-222	ENST00000575009	CSF2RA	P15509	400 aa		29.87	■■■□□ 2.37
SRRM2-222	ENST00000575009	CCL23	P55773	120 aa		29.87	■■■□□ 2.37
SRRM2-222	ENST00000575009	NLRP5	P59047	1200 aa		29.87	■■■□□ 2.37
SRRM2-222	ENST00000575009	TRIM50	Q86XT4	487 aa		29.87	■■■□□ 2.37
SRRM2-222	ENST00000575009	KATNAL1	Q9BW62	490 aa		29.87	■■■□□ 2.37
SRRM2-222	ENST00000575009	WNT8A	Q9H1J5	351 aa		29.87	■■■□□ 2.37
SRRM2-222	ENST00000575009	SH3GLB2	Q9NR46	395 aa		29.87	■■■□□ 2.37
SRRM2-222	ENST00000575009	KCNH7	Q9NS40	1196 aa		29.87	■■■□□ 2.37
SRRM2-222	ENST00000575009	SUPT20HL2	P0C7V6	817 aa		29.86	■■■□□ 2.37
SRRM2-222	ENST00000575009	CEP55	Q53EZ4	464 aa		29.86	■■■□□ 2.37
SRRM2-222	ENST00000575009	CRYGN	Q8WXF5	182 aa		29.86	■■■□□ 2.37
SRRM2-222	ENST00000575009	CTAGE1	Q96RT6	745 aa		29.86	■■■□□ 2.37
SRRM2-222	ENST00000575009	KIF2C	Q99661	725 aa		29.86	■■■□□ 2.37
SRRM2-222	ENST00000575009	SCN5A	Q14524	2016 aa		29.85	■■■□□ 2.37
SRRM2-222	ENST00000575009	ZNF76	P36508	570 aa		29.85	■■■□□ 2.37
SRRM2-222	ENST00000575009	HIC1	Q14526	733 aa		29.85	■■■□□ 2.37
SRRM2-222	ENST00000575009	PTGIS	Q16647	500 aa		29.85	■■■□□ 2.37
SRRM2-222	ENST00000575009	UTP14C	Q5TAP6	766 aa	Known RBP	29.85	■■■□□ 2.37
SRRM2-222	ENST00000575009	SESTD1	Q86VW0	696 aa		29.85	■■■□□ 2.37
SRRM2-222	ENST00000575009	C7orf31	Q8N865	590 aa		29.85	■■■□□ 2.37
SRRM2-222	ENST00000575009	UIMC1	Q96RL1	719 aa		29.85	■■■□□ 2.37
SRRM2-222	ENST00000575009	GTF2IRD1	Q9UHL9	959 aa		29.85	■■■□□ 2.37
SRRM2-222	ENST00000575009	LAMA3	Q16787	3333 aa		29.84	■■■□□ 2.37
SRRM2-222	ENST00000575009	FAM86B1	E9PN63	330 aa		29.84	■■■□□ 2.37
SRRM2-222	ENST00000575009	CDKL5	O76039	1030 aa		29.84	■■■□□ 2.37
SRRM2-222	ENST00000575009	FAM86B2	P0C5J1	330 aa		29.84	■■■□□ 2.37
SRRM2-222	ENST00000575009	ACR	P10323	421 aa		29.84	■■■□□ 2.37
SRRM2-222	ENST00000575009	LRIT3	Q3SXY7	679 aa		29.84	■■■□□ 2.37
SRRM2-222	ENST00000575009	C16orf59	Q7L2K0	433 aa		29.84	■■■□□ 2.37
SRRM2-222	ENST00000575009	TMEM199	Q8N511	208 aa		29.84	■■■□□ 2.37
SRRM2-222	ENST00000575009	GIMAP8	Q8ND71	665 aa	Predicted RBP	29.84	■■■□□ 2.37
SRRM2-222	ENST00000575009	BICD2	Q8TD16	824 aa		29.84	■■■□□ 2.37
SRRM2-222	ENST00000575009	GTF3C6	Q969F1	213 aa		29.84	■■■□□ 2.37
SRRM2-222	ENST00000575009	SCLY	Q96I15	445 aa		29.84	■■■□□ 2.37
SRRM2-222	ENST00000575009	TANC1	Q9C0D5	1861 aa		29.83	■■■□□ 2.37
SRRM2-222	ENST00000575009	STK36	Q9NRP7	1315 aa		29.83	■■■□□ 2.37
SRRM2-222	ENST00000575009		H3BRB1	525 aa		29.83	■■■□□ 2.37
SRRM2-222	ENST00000575009	MEIS1	O00470	390 aa		29.83	■■■□□ 2.37
SRRM2-222	ENST00000575009	ZNF200	P98182	395 aa	Predicted RBP	29.83	■■■□□ 2.37
SRRM2-222	ENST00000575009	NPY5R	Q15761	445 aa		29.83	■■■□□ 2.37
SRRM2-222	ENST00000575009	C22orf23	Q9BZE7	217 aa		29.83	■■■□□ 2.37
SRRM2-222	ENST00000575009	TUT1	Q9H6E5	874 aa	Known RBP	29.83	■■■□□ 2.37
SRRM2-222	ENST00000575009	GJB4	Q9NTQ9	266 aa		29.83	■■■□□ 2.37
SRRM2-222	ENST00000575009	KCNJ14	Q9UNX9	436 aa		29.83	■■■□□ 2.37
SRRM2-222	ENST00000575009	NOD1	Q9Y239	953 aa		29.83	■■■□□ 2.37
SRRM2-222	ENST00000575009	GSTTP1	A0A1W2PQM5	241 aa		29.82	■■■□□ 2.36
SRRM2-222	ENST00000575009	MAFG	O15525	162 aa		29.82	■■■□□ 2.36
SRRM2-222	ENST00000575009	CYP3A4	P08684	503 aa		29.82	■■■□□ 2.36
SRRM2-222	ENST00000575009	TCF7	P36402	384 aa	Predicted RBP	29.82	■■■□□ 2.36
SRRM2-222	ENST00000575009	ITGB3BP	Q13352	177 aa	Predicted RBP	29.82	■■■□□ 2.36
SRRM2-222	ENST00000575009	PPIG	Q13427	754 aa	Known RBP eCLIP	29.82	■■■□□ 2.36	6e-12	■□□□□ 10.5
SRRM2-222	ENST00000575009	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	29.82	■■■□□ 2.36	5e-21	■■□□□ 12.7
SRRM2-222	ENST00000575009	AGO4	Q9HCK5	861 aa	Known RBP	29.82	■■■□□ 2.36
SRRM2-222	ENST00000575009	PCDHA4	Q9UN74	947 aa		29.82	■■■□□ 2.36
SRRM2-222	ENST00000575009	IGLV3-22	A0A075B6J6	115 aa		29.81	■■■□□ 2.36
SRRM2-222	ENST00000575009	RBAK-RBAKDN	I3L0D1	243 aa		29.81	■■■□□ 2.36
SRRM2-222	ENST00000575009	ST3GAL1	Q11201	340 aa		29.81	■■■□□ 2.36
SRRM2-222	ENST00000575009	MCTP2	Q6DN12	878 aa		29.81	■■■□□ 2.36
SRRM2-222	ENST00000575009	PLA2G4D	Q86XP0	818 aa		29.81	■■■□□ 2.36
SRRM2-222	ENST00000575009	DHX38	Q92620	1227 aa	Known RBP	29.81	■■■□□ 2.36
SRRM2-222	ENST00000575009	EDIL3	O43854	480 aa		29.8	■■■□□ 2.36
SRRM2-222	ENST00000575009	JPH1	Q9HDC5	661 aa	Predicted RBP	29.8	■■■□□ 2.36
SRRM2-222	ENST00000575009	ORC3	Q9UBD5	711 aa	Predicted RBP	29.8	■■■□□ 2.36
SRRM2-222	ENST00000575009	FDPS	P14324	419 aa	Known RBP	29.79	■■■□□ 2.36
SRRM2-222	ENST00000575009	TMEM240	Q5SV17	173 aa		29.79	■■■□□ 2.36
SRRM2-222	ENST00000575009	BLID	Q8IZY5	108 aa		29.79	■■■□□ 2.36
SRRM2-222	ENST00000575009	SEPT1	Q8WYJ6	367 aa		29.79	■■■□□ 2.36
SRRM2-222	ENST00000575009	RNPC3	Q96LT9	517 aa	Known RBP	29.79	■■■□□ 2.36
SRRM2-222	ENST00000575009	IL23A	Q9NPF7	189 aa		29.79	■■■□□ 2.36
SRRM2-222	ENST00000575009	SLC9A2	Q9UBY0	812 aa		29.79	■■■□□ 2.36
SRRM2-222	ENST00000575009	DDX39A	O00148	427 aa	Known RBP	29.78	■■■□□ 2.36
SRRM2-222	ENST00000575009	JAK2	O60674	1132 aa		29.78	■■■□□ 2.36
SRRM2-222	ENST00000575009	SMIM10L2A	P0DMW4	78 aa		29.78	■■■□□ 2.36
SRRM2-222	ENST00000575009	SMIM10L2B	P0DMW5	78 aa		29.78	■■■□□ 2.36
SRRM2-222	ENST00000575009	NIPA1	Q7RTP0	329 aa		29.78	■■■□□ 2.36
SRRM2-222	ENST00000575009	DAGLB	Q8NCG7	672 aa		29.78	■■■□□ 2.36

Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms