RNA–Protein interactions for RNA: ENST00000574699.1

TNFRSF12A-205, Transcript of TNF receptor superfamily member 12A, humanhuman

TSL 2

Gene TNFRSF12A, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF12A-205ENST00000574699 SEMA6BQ9H3T3 888 aa22.17■■□□□ 1.14
TNFRSF12A-205ENST00000574699 H3BRB1 525 aa22.16■■□□□ 1.14
TNFRSF12A-205ENST00000574699 STXBP3O00186 592 aa22.16■■□□□ 1.14
TNFRSF12A-205ENST00000574699 FOSP01100 380 aaPredicted RBP22.16■■□□□ 1.14
TNFRSF12A-205ENST00000574699 ACTN1P12814 892 aa22.16■■□□□ 1.14
TNFRSF12A-205ENST00000574699 ADD1P35611 737 aaKnown RBP22.16■■□□□ 1.14
TNFRSF12A-205ENST00000574699 TYW1BQ6NUM6 668 aa22.16■■□□□ 1.14
TNFRSF12A-205ENST00000574699 GPR20Q99678 358 aa22.16■■□□□ 1.14
TNFRSF12A-205ENST00000574699 TTYH1Q9H313 450 aaPredicted RBP22.16■■□□□ 1.14
TNFRSF12A-205ENST00000574699 TUT1Q9H6E5 874 aaKnown RBP22.16■■□□□ 1.14
TNFRSF12A-205ENST00000574699 BCAS3Q9H6U6 928 aa22.16■■□□□ 1.14
TNFRSF12A-205ENST00000574699 CXXC1Q9P0U4 656 aaPredicted RBP22.16■■□□□ 1.14
TNFRSF12A-205ENST00000574699 COL6A3P12111 3177 aa22.15■■□□□ 1.14
TNFRSF12A-205ENST00000574699 KAT6AQ92794 2004 aa22.15■■□□□ 1.14
TNFRSF12A-205ENST00000574699 SMCO2A6NFE2 343 aa22.15■■□□□ 1.14
TNFRSF12A-205ENST00000574699 ZBBXA8MT70 800 aa22.15■■□□□ 1.14
TNFRSF12A-205ENST00000574699 ITGB5P18084 799 aa22.15■■□□□ 1.14
TNFRSF12A-205ENST00000574699 PTK7Q13308 1070 aa22.15■■□□□ 1.14
TNFRSF12A-205ENST00000574699 MTMR1Q13613 665 aa22.15■■□□□ 1.14
TNFRSF12A-205ENST00000574699 PFKFB3Q16875 520 aaPredicted RBP22.15■■□□□ 1.14
TNFRSF12A-205ENST00000574699 RUFY3Q7L099 469 aa22.15■■□□□ 1.14
TNFRSF12A-205ENST00000574699 TIFAQ96CG3 184 aa22.15■■□□□ 1.14
TNFRSF12A-205ENST00000574699 ZNF215Q9UL58 517 aaPredicted RBP22.15■■□□□ 1.14
TNFRSF12A-205ENST00000574699 UBIAD1Q9Y5Z9 338 aa22.15■■□□□ 1.14
TNFRSF12A-205ENST00000574699 SLC4A7Q9Y6M7 1214 aa22.15■■□□□ 1.14
TNFRSF12A-205ENST00000574699 GRXCR1A8MXD5 290 aa22.14■■□□□ 1.13
TNFRSF12A-205ENST00000574699 PARNO95453 639 aaKnown RBP22.14■■□□□ 1.13
TNFRSF12A-205ENST00000574699 SCG2P13521 617 aa22.14■■□□□ 1.13
TNFRSF12A-205ENST00000574699 SELPP16109 830 aa22.14■■□□□ 1.13
TNFRSF12A-205ENST00000574699 SP4Q02446 784 aa22.14■■□□□ 1.13
TNFRSF12A-205ENST00000574699 RBL2Q08999 1139 aa22.14■■□□□ 1.13
TNFRSF12A-205ENST00000574699 AP3B2Q13367 1082 aa22.14■■□□□ 1.13
TNFRSF12A-205ENST00000574699 RAB30Q15771 203 aa22.14■■□□□ 1.13
TNFRSF12A-205ENST00000574699 LRRC8DQ7L1W4 858 aa22.14■■□□□ 1.13
TNFRSF12A-205ENST00000574699 DHX38Q92620 1227 aaKnown RBP22.14■■□□□ 1.13
TNFRSF12A-205ENST00000574699 VWCEQ96DN2 955 aa22.14■■□□□ 1.13
TNFRSF12A-205ENST00000574699 PBX4Q9BYU1 374 aa22.14■■□□□ 1.13
TNFRSF12A-205ENST00000574699 FTOQ9C0B1 505 aaKnown RBP eCLIP22.14■■□□□ 1.13
TNFRSF12A-205ENST00000574699 MSRAQ9UJ68 235 aa22.14■■□□□ 1.13
TNFRSF12A-205ENST00000574699 CYP46A1Q9Y6A2 500 aa22.14■■□□□ 1.13
TNFRSF12A-205ENST00000574699 MAFGO15525 162 aa22.13■■□□□ 1.13
TNFRSF12A-205ENST00000574699 KCNA2P16389 499 aa22.13■■□□□ 1.13
TNFRSF12A-205ENST00000574699 AKAP17AQ02040 695 aaKnown RBP22.13■■□□□ 1.13
TNFRSF12A-205ENST00000574699 CCDC12Q8WUD4 166 aaPredicted RBP22.13■■□□□ 1.13
TNFRSF12A-205ENST00000574699 CDX2Q99626 313 aaPredicted RBP22.13■■□□□ 1.13
TNFRSF12A-205ENST00000574699 ZSWIM6Q9HCJ5 1215 aa22.13■■□□□ 1.13
TNFRSF12A-205ENST00000574699 JADE2Q9NQC1 790 aa22.13■■□□□ 1.13
TNFRSF12A-205ENST00000574699 TET1Q8NFU7 2136 aa22.13■■□□□ 1.13
TNFRSF12A-205ENST00000574699 C17orf102A2RUQ5 167 aa22.12■■□□□ 1.13
TNFRSF12A-205ENST00000574699 CKBP12277 381 aa22.12■■□□□ 1.13
TNFRSF12A-205ENST00000574699 ANO3Q9BYT9 981 aa22.12■■□□□ 1.13
TNFRSF12A-205ENST00000574699 TM6SF1Q9BZW5 370 aa22.12■■□□□ 1.13
TNFRSF12A-205ENST00000574699 PRPF3O43395 683 aaKnown RBP22.11■■□□□ 1.13
TNFRSF12A-205ENST00000574699 ATP9AO75110 1047 aa22.11■■□□□ 1.13
TNFRSF12A-205ENST00000574699 SMIM10L2AP0DMW4 78 aa22.11■■□□□ 1.13
TNFRSF12A-205ENST00000574699 SMIM10L2BP0DMW5 78 aa22.11■■□□□ 1.13
TNFRSF12A-205ENST00000574699 PBX2P40425 430 aa22.11■■□□□ 1.13
TNFRSF12A-205ENST00000574699 EVCP57679 992 aa22.11■■□□□ 1.13
TNFRSF12A-205ENST00000574699 ZNF200P98182 395 aaPredicted RBP22.11■■□□□ 1.13
TNFRSF12A-205ENST00000574699 UTP14CQ5TAP6 766 aaKnown RBP22.11■■□□□ 1.13
TNFRSF12A-205ENST00000574699 TRIM50Q86XT4 487 aa22.11■■□□□ 1.13
TNFRSF12A-205ENST00000574699 ATP6V0A1Q93050 837 aa22.11■■□□□ 1.13
TNFRSF12A-205ENST00000574699 PGBD1Q96JS3 809 aa22.11■■□□□ 1.13
TNFRSF12A-205ENST00000574699 ZNF576Q9H609 170 aa22.11■■□□□ 1.13
TNFRSF12A-205ENST00000574699 ESYT2A0FGR8 921 aa22.1■■□□□ 1.13
TNFRSF12A-205ENST00000574699 GNAT1P11488 350 aa22.1■■□□□ 1.13
TNFRSF12A-205ENST00000574699 ATP2A2P16615 1042 aaKnown RBP22.1■■□□□ 1.13
TNFRSF12A-205ENST00000574699 PDIA3P30101 505 aaKnown RBP22.1■■□□□ 1.13
TNFRSF12A-205ENST00000574699 TCF7P36402 384 aaPredicted RBP22.1■■□□□ 1.13
TNFRSF12A-205ENST00000574699 CLK2P49760 499 aaKnown RBP22.1■■□□□ 1.13
TNFRSF12A-205ENST00000574699 SERINC5Q86VE9 423 aa22.1■■□□□ 1.13
TNFRSF12A-205ENST00000574699 SEPT1Q8WYJ6 367 aa22.1■■□□□ 1.13
TNFRSF12A-205ENST00000574699 MXRA8Q9BRK3 442 aa22.1■■□□□ 1.13
TNFRSF12A-205ENST00000574699 RNF26Q9BY78 433 aaPredicted RBP22.1■■□□□ 1.13
TNFRSF12A-205ENST00000574699 C6orf50Q9HD87 102 aa22.1■■□□□ 1.13
TNFRSF12A-205ENST00000574699 PKD2L1Q9P0L9 805 aa22.1■■□□□ 1.13
TNFRSF12A-205ENST00000574699 CDH23Q9H251 3354 aa22.09■■□□□ 1.13
TNFRSF12A-205ENST00000574699 BAIAP3O94812 1187 aa22.09■■□□□ 1.13
TNFRSF12A-205ENST00000574699 HOXC8P31273 242 aa22.09■■□□□ 1.13
TNFRSF12A-205ENST00000574699 SREBF1P36956 1147 aa22.09■■□□□ 1.13
TNFRSF12A-205ENST00000574699 MCTP2Q6DN12 878 aa22.09■■□□□ 1.13
TNFRSF12A-205ENST00000574699 MYLIPQ8WY64 445 aa22.09■■□□□ 1.13
TNFRSF12A-205ENST00000574699 PHKBQ93100 1093 aa22.09■■□□□ 1.13
TNFRSF12A-205ENST00000574699 ZMYND12Q9H0C1 365 aa22.09■■□□□ 1.13
TNFRSF12A-205ENST00000574699 KCNH7Q9NS40 1196 aa22.09■■□□□ 1.13
TNFRSF12A-205ENST00000574699 TMEM260Q9NX78 707 aa22.09■■□□□ 1.13
TNFRSF12A-205ENST00000574699 TELO2Q9Y4R8 837 aa22.09■■□□□ 1.13
TNFRSF12A-205ENST00000574699 FOSL2P15408 326 aa22.08■■□□□ 1.13
TNFRSF12A-205ENST00000574699 IFNAR1P17181 557 aa22.08■■□□□ 1.13
TNFRSF12A-205ENST00000574699 GNA11P29992 359 aa22.08■■□□□ 1.13
TNFRSF12A-205ENST00000574699 CCT2P78371 535 aaKnown RBP22.08■■□□□ 1.13
TNFRSF12A-205ENST00000574699 TOB2Q14106 344 aaPredicted RBP22.08■■□□□ 1.13
TNFRSF12A-205ENST00000574699 HIC1Q14526 733 aa22.08■■□□□ 1.13
TNFRSF12A-205ENST00000574699 NTRK3Q16288 839 aa22.08■■□□□ 1.13
TNFRSF12A-205ENST00000574699 PKN1Q16512 942 aa22.08■■□□□ 1.13
TNFRSF12A-205ENST00000574699 TRIM71Q2Q1W2 868 aaKnown RBP22.08■■□□□ 1.13
TNFRSF12A-205ENST00000574699 CEP55Q53EZ4 464 aa22.08■■□□□ 1.13
TNFRSF12A-205ENST00000574699 ZNF618Q5T7W0 954 aa22.08■■□□□ 1.13
TNFRSF12A-205ENST00000574699 SLC17A8Q8NDX2 589 aa22.08■■□□□ 1.13
TNFRSF12A-205ENST00000574699 CCDC148Q8NFR7 591 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms