RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 FAM86B1E9PN63 330 aa14.49□□□□□ -0.09
TRAPPC1-206ENST00000573989 H3BQV1 296 aa14.49□□□□□ -0.09
TRAPPC1-206ENST00000573989 EVI5O60447 810 aa14.49□□□□□ -0.09
TRAPPC1-206ENST00000573989 HSP90AA1P07900 732 aaKnown RBP14.49□□□□□ -0.09
TRAPPC1-206ENST00000573989 FAM86B2P0C5J1 330 aa14.49□□□□□ -0.09
TRAPPC1-206ENST00000573989 KCNA2P16389 499 aa14.49□□□□□ -0.09
TRAPPC1-206ENST00000573989 PDCP20941 246 aa14.49□□□□□ -0.09
TRAPPC1-206ENST00000573989 PTGS1P23219 599 aa14.49□□□□□ -0.09
TRAPPC1-206ENST00000573989 ATN1P54259 1190 aaPredicted RBP14.49□□□□□ -0.09
TRAPPC1-206ENST00000573989 IRX5P78411 483 aaPredicted RBP14.49□□□□□ -0.09
TRAPPC1-206ENST00000573989 PURAQ00577 322 aaKnown RBP14.49□□□□□ -0.09
TRAPPC1-206ENST00000573989 GUCY1B3Q02153 619 aa14.49□□□□□ -0.09
TRAPPC1-206ENST00000573989 PRR16Q569H4 304 aa14.49□□□□□ -0.09
TRAPPC1-206ENST00000573989 C1orf53Q5VUE5 145 aa14.49□□□□□ -0.09
TRAPPC1-206ENST00000573989 CYP2W1Q8TAV3 490 aa14.49□□□□□ -0.09
TRAPPC1-206ENST00000573989 OXER1Q8TDS5 423 aa14.49□□□□□ -0.09
TRAPPC1-206ENST00000573989 INTS4Q96HW7 963 aaKnown RBP14.49□□□□□ -0.09
TRAPPC1-206ENST00000573989 ZNF577Q9BSK1 485 aa14.49□□□□□ -0.09
TRAPPC1-206ENST00000573989 FOXP1Q9H334 677 aaPredicted RBP14.49□□□□□ -0.09
TRAPPC1-206ENST00000573989 AGO4Q9HCK5 861 aaKnown RBP14.49□□□□□ -0.09
TRAPPC1-206ENST00000573989 JPH1Q9HDC5 661 aaPredicted RBP14.49□□□□□ -0.09
TRAPPC1-206ENST00000573989 TBC1D22BQ9NU19 505 aa14.49□□□□□ -0.09
TRAPPC1-206ENST00000573989 PKD2L1Q9P0L9 805 aa14.49□□□□□ -0.09
TRAPPC1-206ENST00000573989 PDE4DIPQ5VU43 2346 aa14.49□□□□□ -0.09
TRAPPC1-206ENST00000573989 IGLV3-22A0A075B6J6 115 aa14.48□□□□□ -0.09
TRAPPC1-206ENST00000573989 CYP3A7-CYP3A51PA0A087WV96 503 aa14.48□□□□□ -0.09
TRAPPC1-206ENST00000573989 IPO5O00410 1097 aaKnown RBP14.48□□□□□ -0.09
TRAPPC1-206ENST00000573989 SORBS3O60504 671 aa14.48□□□□□ -0.09
TRAPPC1-206ENST00000573989 ARP10275 920 aa14.48□□□□□ -0.09
TRAPPC1-206ENST00000573989 CYP3A7P24462 503 aa14.48□□□□□ -0.09
TRAPPC1-206ENST00000573989 NR5A1Q13285 461 aa14.48□□□□□ -0.09
TRAPPC1-206ENST00000573989 LETM2Q2VYF4 491 aa14.48□□□□□ -0.09
TRAPPC1-206ENST00000573989 HSDL1Q3SXM5 330 aa14.48□□□□□ -0.09
TRAPPC1-206ENST00000573989 Q4G0T1 1027 aa14.48□□□□□ -0.09
TRAPPC1-206ENST00000573989 SLC9A2Q9UBY0 812 aa14.48□□□□□ -0.09
TRAPPC1-206ENST00000573989 ALPK3Q96L96 1907 aa14.48□□□□□ -0.09
TRAPPC1-206ENST00000573989 KAT6AQ92794 2004 aa14.48□□□□□ -0.09
TRAPPC1-206ENST00000573989 SCN10AQ9Y5Y9 1956 aa14.47□□□□□ -0.09
TRAPPC1-206ENST00000573989 DCDC2CA8MYV0 355 aa14.47□□□□□ -0.09
TRAPPC1-206ENST00000573989 ARVCFO00192 962 aa14.47□□□□□ -0.09
TRAPPC1-206ENST00000573989 CCNT1O60563 726 aaKnown RBP14.47□□□□□ -0.09
TRAPPC1-206ENST00000573989 ATP9AO75110 1047 aa14.47□□□□□ -0.09
TRAPPC1-206ENST00000573989 HOXD8P13378 290 aaPredicted RBP14.47□□□□□ -0.09
TRAPPC1-206ENST00000573989 RTP1P59025 263 aa14.47□□□□□ -0.09
TRAPPC1-206ENST00000573989 SP4Q02446 784 aa14.47□□□□□ -0.09
TRAPPC1-206ENST00000573989 ITGA7Q13683 1181 aa14.47□□□□□ -0.09
TRAPPC1-206ENST00000573989 SNX17Q15036 470 aa14.47□□□□□ -0.09
TRAPPC1-206ENST00000573989 LRRC26Q2I0M4 334 aa14.47□□□□□ -0.09
TRAPPC1-206ENST00000573989 LARP1BQ659C4 914 aaKnown RBP14.47□□□□□ -0.09
TRAPPC1-206ENST00000573989 PPP4R3AQ6IN85 833 aa14.47□□□□□ -0.09
TRAPPC1-206ENST00000573989 PRKAG2Q9UGJ0 569 aa14.47□□□□□ -0.09
TRAPPC1-206ENST00000573989 DDX25Q9UHL0 483 aaKnown RBP14.47□□□□□ -0.09
TRAPPC1-206ENST00000573989 ZNF215Q9UL58 517 aaPredicted RBP14.47□□□□□ -0.09
TRAPPC1-206ENST00000573989 ATP11BQ9Y2G3 1177 aa14.47□□□□□ -0.09
TRAPPC1-206ENST00000573989 TLR3O15455 904 aaKnown RBP14.46□□□□□ -0.09
TRAPPC1-206ENST00000573989 MARCH6O60337 910 aa14.46□□□□□ -0.09
TRAPPC1-206ENST00000573989 MCTP1Q6DN14 999 aa14.46□□□□□ -0.09
TRAPPC1-206ENST00000573989 SEPT1Q8WYJ6 367 aa14.46□□□□□ -0.09
TRAPPC1-206ENST00000573989 TNFRSF25Q93038 417 aa14.46□□□□□ -0.09
TRAPPC1-206ENST00000573989 TOX2Q96NM4 488 aa14.46□□□□□ -0.09
TRAPPC1-206ENST00000573989 GPR20Q99678 358 aa14.46□□□□□ -0.09
TRAPPC1-206ENST00000573989 NOL7Q9UMY1 257 aaKnown RBP14.46□□□□□ -0.09
TRAPPC1-206ENST00000573989 MKI67P46013 3256 aaKnown RBP14.46□□□□□ -0.1
TRAPPC1-206ENST00000573989 MYH9P35579 1960 aaKnown RBP14.45□□□□□ -0.1
TRAPPC1-206ENST00000573989 GAS7O60861 476 aa14.45□□□□□ -0.1
TRAPPC1-206ENST00000573989 BAG4O95429 457 aaKnown RBP14.45□□□□□ -0.1
TRAPPC1-206ENST00000573989 TDP2O95551 362 aa14.45□□□□□ -0.1
TRAPPC1-206ENST00000573989 TCF7P36402 384 aaPredicted RBP14.45□□□□□ -0.1
TRAPPC1-206ENST00000573989 KRT76Q01546 638 aa14.45□□□□□ -0.1
TRAPPC1-206ENST00000573989 PTPN11Q06124 597 aaPredicted RBP14.45□□□□□ -0.1
TRAPPC1-206ENST00000573989 NFRKBQ6P4R8 1299 aa14.45□□□□□ -0.1
TRAPPC1-206ENST00000573989 NOSTRINQ8IVI9 506 aa14.45□□□□□ -0.1
TRAPPC1-206ENST00000573989 TNPO1Q92973 898 aaKnown RBP14.45□□□□□ -0.1
TRAPPC1-206ENST00000573989 MBOAT7Q96N66 472 aa14.45□□□□□ -0.1
TRAPPC1-206ENST00000573989 RIT2Q99578 217 aa14.45□□□□□ -0.1
TRAPPC1-206ENST00000573989 TEKT3Q9BXF9 490 aa14.45□□□□□ -0.1
TRAPPC1-206ENST00000573989 AZI2Q9H6S1 392 aa14.45□□□□□ -0.1
TRAPPC1-206ENST00000573989 H3BRB1 525 aa14.44□□□□□ -0.1
TRAPPC1-206ENST00000573989 DDX39AO00148 427 aaKnown RBP14.44□□□□□ -0.1
TRAPPC1-206ENST00000573989 TBX3O15119 743 aa14.44□□□□□ -0.1
TRAPPC1-206ENST00000573989 MSH4O15457 936 aa14.44□□□□□ -0.1
TRAPPC1-206ENST00000573989 PQBP1O60828 265 aaKnown RBP14.44□□□□□ -0.1
TRAPPC1-206ENST00000573989 F2P00734 622 aa14.44□□□□□ -0.1
TRAPPC1-206ENST00000573989 LGALS2P05162 132 aa14.44□□□□□ -0.1
TRAPPC1-206ENST00000573989 ZNF286BP0CG31 522 aa14.44□□□□□ -0.1
TRAPPC1-206ENST00000573989 PDIA4P13667 645 aaKnown RBP14.44□□□□□ -0.1
TRAPPC1-206ENST00000573989 U2AF2P26368 475 aaKnown RBP eCLIP14.44□□□□□ -0.1
TRAPPC1-206ENST00000573989 TRAPPC10P48553 1259 aa14.44□□□□□ -0.1
TRAPPC1-206ENST00000573989 PSEN2P49810 448 aa14.44□□□□□ -0.1
TRAPPC1-206ENST00000573989 CDK7P50613 346 aa14.44□□□□□ -0.1
TRAPPC1-206ENST00000573989 CHMP4BP1P59074 171 aa14.44□□□□□ -0.1
TRAPPC1-206ENST00000573989 PSMC6P62333 389 aa14.44□□□□□ -0.1
TRAPPC1-206ENST00000573989 ITGB3BPQ13352 177 aaPredicted RBP14.44□□□□□ -0.1
TRAPPC1-206ENST00000573989 ORC2Q13416 577 aaPredicted RBP14.44□□□□□ -0.1
TRAPPC1-206ENST00000573989 NBPF20Q3BBV1 942 aa14.44□□□□□ -0.1
TRAPPC1-206ENST00000573989 TRIM60Q495X7 471 aa14.44□□□□□ -0.1
TRAPPC1-206ENST00000573989 FAM47CQ5HY64 1035 aa14.44□□□□□ -0.1
TRAPPC1-206ENST00000573989 EARS2Q5JPH6 523 aaKnown RBP14.44□□□□□ -0.1
TRAPPC1-206ENST00000573989 UTP14CQ5TAP6 766 aaKnown RBP14.44□□□□□ -0.1
TRAPPC1-206ENST00000573989 LRCH2Q5VUJ6 765 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms