RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 ZFP91Q96JP5 570 aaPredicted RBP12.55□□□□□ -0.4
CHD3-216ENST00000573936 GLT1D1Q96MS3 346 aa12.55□□□□□ -0.4
CHD3-216ENST00000573936 SEZ6LQ9BYH1 1024 aa12.55□□□□□ -0.4
CHD3-216ENST00000573936 ELP1O95163 1332 aa12.55□□□□□ -0.4
CHD3-216ENST00000573936 A0A1W2PQ45 241 aaPredicted RBP12.54□□□□□ -0.4
CHD3-216ENST00000573936 A0A1W2PQY0 241 aa12.54□□□□□ -0.4
CHD3-216ENST00000573936 MYADML2A6NDP7 307 aa12.54□□□□□ -0.4
CHD3-216ENST00000573936 MEIS1O00470 390 aa12.54□□□□□ -0.4
CHD3-216ENST00000573936 ADAMTS3O15072 1205 aa12.54□□□□□ -0.4
CHD3-216ENST00000573936 DTNBO60941 627 aa12.54□□□□□ -0.4
CHD3-216ENST00000573936 UBA1P22314 1058 aaKnown RBP12.54□□□□□ -0.4
CHD3-216ENST00000573936 RTP1P59025 263 aa12.54□□□□□ -0.4
CHD3-216ENST00000573936 SETQ01105 290 aaPredicted RBP12.54□□□□□ -0.4
CHD3-216ENST00000573936 SP2Q02086 613 aa12.54□□□□□ -0.4
CHD3-216ENST00000573936 SEMA3FQ13275 785 aa12.54□□□□□ -0.4
CHD3-216ENST00000573936 CUL4AQ13619 759 aa12.54□□□□□ -0.4
CHD3-216ENST00000573936 DGKDQ16760 1214 aa12.54□□□□□ -0.4
CHD3-216ENST00000573936 MYSM1Q5VVJ2 828 aa12.54□□□□□ -0.4
CHD3-216ENST00000573936 KRT40Q6A162 431 aa12.54□□□□□ -0.4
CHD3-216ENST00000573936 SLC39A5Q6ZMH5 540 aa12.54□□□□□ -0.4
CHD3-216ENST00000573936 PLA2G4DQ86XP0 818 aa12.54□□□□□ -0.4
CHD3-216ENST00000573936 PPTC7Q8NI37 304 aa12.54□□□□□ -0.4
CHD3-216ENST00000573936 TBCKQ8TEA7 893 aa12.54□□□□□ -0.4
CHD3-216ENST00000573936 CRYGNQ8WXF5 182 aa12.54□□□□□ -0.4
CHD3-216ENST00000573936 SPATA33Q96N06 139 aa12.54□□□□□ -0.4
CHD3-216ENST00000573936 NAP1L4Q99733 375 aaKnown RBP12.54□□□□□ -0.4
CHD3-216ENST00000573936 STARD7Q9NQZ5 370 aa12.54□□□□□ -0.4
CHD3-216ENST00000573936 SMC3Q9UQE7 1217 aa12.54□□□□□ -0.4
CHD3-216ENST00000573936 ATP11BQ9Y2G3 1177 aa12.54□□□□□ -0.4
CHD3-216ENST00000573936 A0A0U1RQG5 324 aaPredicted RBP12.53□□□□□ -0.4
CHD3-216ENST00000573936 PPFIA4O75335 1185 aa12.53□□□□□ -0.4
CHD3-216ENST00000573936 MYL3P08590 195 aa12.53□□□□□ -0.4
CHD3-216ENST00000573936 C1orf53Q5VUE5 145 aa12.53□□□□□ -0.4
CHD3-216ENST00000573936 MOXD1Q6UVY6 613 aa12.53□□□□□ -0.4
CHD3-216ENST00000573936 METTL7BQ6UX53 244 aa12.53□□□□□ -0.4
CHD3-216ENST00000573936 CYFIP1Q7L576 1253 aa12.53□□□□□ -0.4
CHD3-216ENST00000573936 HSCBQ8IWL3 235 aa12.53□□□□□ -0.4
CHD3-216ENST00000573936 FBXO18Q8NFZ0 1043 aa12.53□□□□□ -0.4
CHD3-216ENST00000573936 AFG1LQ8WV93 481 aa12.53□□□□□ -0.4
CHD3-216ENST00000573936 FERMT2Q96AC1 680 aa12.53□□□□□ -0.4
CHD3-216ENST00000573936 GUCD1Q96NT3 240 aa12.53□□□□□ -0.4
CHD3-216ENST00000573936 SDF4Q9BRK5 362 aa12.53□□□□□ -0.4
CHD3-216ENST00000573936 MTG1Q9BT17 334 aaPredicted RBP12.53□□□□□ -0.4
CHD3-216ENST00000573936 KCNH7Q9NS40 1196 aa12.53□□□□□ -0.4
CHD3-216ENST00000573936 GJB4Q9NTQ9 266 aa12.53□□□□□ -0.4
CHD3-216ENST00000573936 KIAA1217Q5T5P2 1943 aa12.52□□□□□ -0.4
CHD3-216ENST00000573936 FAM86B1E9PN63 330 aa12.52□□□□□ -0.41
CHD3-216ENST00000573936 K7ELQ4 463 aaPredicted RBP12.52□□□□□ -0.41
CHD3-216ENST00000573936 NOP56O00567 594 aaKnown RBP12.52□□□□□ -0.41
CHD3-216ENST00000573936 MMP3P08254 477 aa12.52□□□□□ -0.41
CHD3-216ENST00000573936 FAM86B2P0C5J1 330 aa12.52□□□□□ -0.41
CHD3-216ENST00000573936 KCNA2P16389 499 aa12.52□□□□□ -0.41
CHD3-216ENST00000573936 PTGS1P23219 599 aa12.52□□□□□ -0.41
CHD3-216ENST00000573936 GJB2P29033 226 aa12.52□□□□□ -0.41
CHD3-216ENST00000573936 FOSBP53539 338 aa12.52□□□□□ -0.41
CHD3-216ENST00000573936 IRX5P78411 483 aaPredicted RBP12.52□□□□□ -0.41
CHD3-216ENST00000573936 PURAQ00577 322 aaKnown RBP12.52□□□□□ -0.41
CHD3-216ENST00000573936 PIK3AP1Q6ZUJ8 805 aa12.52□□□□□ -0.41
CHD3-216ENST00000573936 NEK8Q86SG6 692 aa12.52□□□□□ -0.41
CHD3-216ENST00000573936 DIS3L2Q8IYB7 885 aaKnown RBP12.52□□□□□ -0.41
CHD3-216ENST00000573936 INTS4Q96HW7 963 aaKnown RBP12.52□□□□□ -0.41
CHD3-216ENST00000573936 KATNAL1Q9BW62 490 aa12.52□□□□□ -0.41
CHD3-216ENST00000573936 FOXP1Q9H334 677 aaPredicted RBP12.52□□□□□ -0.41
CHD3-216ENST00000573936 AGO4Q9HCK5 861 aaKnown RBP12.52□□□□□ -0.41
CHD3-216ENST00000573936 PRDM5Q9NQX1 630 aaPredicted RBP12.52□□□□□ -0.41
CHD3-216ENST00000573936 NFASCO94856 1347 aa12.52□□□□□ -0.41
CHD3-216ENST00000573936 MROH7Q68CQ1 1323 aa12.52□□□□□ -0.41
CHD3-216ENST00000573936 CYP3A7-CYP3A51PA0A087WV96 503 aa12.51□□□□□ -0.41
CHD3-216ENST00000573936 BTBD18B2RXH4 712 aa12.51□□□□□ -0.41
CHD3-216ENST00000573936 ARVCFO00192 962 aa12.51□□□□□ -0.41
CHD3-216ENST00000573936 ATP9AO75110 1047 aa12.51□□□□□ -0.41
CHD3-216ENST00000573936 ARP10275 920 aa12.51□□□□□ -0.41
CHD3-216ENST00000573936 GCFC2P16383 781 aaKnown RBP12.51□□□□□ -0.41
CHD3-216ENST00000573936 CYP3A7P24462 503 aa12.51□□□□□ -0.41
CHD3-216ENST00000573936 GUCY1B3Q02153 619 aa12.51□□□□□ -0.41
CHD3-216ENST00000573936 GNL2Q13823 731 aaKnown RBP12.51□□□□□ -0.41
CHD3-216ENST00000573936 SNX17Q15036 470 aa12.51□□□□□ -0.41
CHD3-216ENST00000573936 INF2Q27J81 1249 aa12.51□□□□□ -0.41
CHD3-216ENST00000573936 HSDL1Q3SXM5 330 aa12.51□□□□□ -0.41
CHD3-216ENST00000573936 Q4G0T1 1027 aa12.51□□□□□ -0.41
CHD3-216ENST00000573936 PRR16Q569H4 304 aa12.51□□□□□ -0.41
CHD3-216ENST00000573936 CXCL17Q6UXB2 119 aa12.51□□□□□ -0.41
CHD3-216ENST00000573936 MAFAQ8NHW3 353 aaPredicted RBP12.51□□□□□ -0.41
CHD3-216ENST00000573936 CYP2W1Q8TAV3 490 aa12.51□□□□□ -0.41
CHD3-216ENST00000573936 OXER1Q8TDS5 423 aa12.51□□□□□ -0.41
CHD3-216ENST00000573936 ZNF577Q9BSK1 485 aa12.51□□□□□ -0.41
CHD3-216ENST00000573936 TBC1D22BQ9NU19 505 aa12.51□□□□□ -0.41
CHD3-216ENST00000573936 TCEAL9Q9UHQ7 104 aa12.51□□□□□ -0.41
CHD3-216ENST00000573936 IGLV3-22A0A075B6J6 115 aa12.5□□□□□ -0.41
CHD3-216ENST00000573936 SORBS3O60504 671 aa12.5□□□□□ -0.41
CHD3-216ENST00000573936 HOXD8P13378 290 aaPredicted RBP12.5□□□□□ -0.41
CHD3-216ENST00000573936 NR5A1Q13285 461 aa12.5□□□□□ -0.41
CHD3-216ENST00000573936 ITGA7Q13683 1181 aa12.5□□□□□ -0.41
CHD3-216ENST00000573936 LETM2Q2VYF4 491 aa12.5□□□□□ -0.41
CHD3-216ENST00000573936 TRIM60Q495X7 471 aa12.5□□□□□ -0.41
CHD3-216ENST00000573936 PPP4R3AQ6IN85 833 aa12.5□□□□□ -0.41
CHD3-216ENST00000573936 SEPT1Q8WYJ6 367 aa12.5□□□□□ -0.41
CHD3-216ENST00000573936 SYMPKQ92797 1274 aaKnown RBP12.5□□□□□ -0.41
CHD3-216ENST00000573936 TNFRSF25Q93038 417 aa12.5□□□□□ -0.41
CHD3-216ENST00000573936 MBOAT7Q96N66 472 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms