RNA–Protein interactions for RNA: ENST00000573891.6

CACNA1A-203, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 896 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-203ENST00000573891 SLC30A10Q6XR72 485 aa7.09□□□□□ -1.27
CACNA1A-203ENST00000573891 DEFB128Q7Z7B8 93 aa7.09□□□□□ -1.27
CACNA1A-203ENST00000573891 FAM174AQ8TBP5 190 aa7.09□□□□□ -1.27
CACNA1A-203ENST00000573891 PHOSPHO2Q8TCD6 241 aa7.09□□□□□ -1.27
CACNA1A-203ENST00000573891 OTUD7AQ8TE49 926 aaPredicted RBP7.09□□□□□ -1.27
CACNA1A-203ENST00000573891 CLEC4DQ8WXI8 215 aa7.09□□□□□ -1.27
CACNA1A-203ENST00000573891 SLC9A7Q96T83 725 aa7.09□□□□□ -1.27
CACNA1A-203ENST00000573891 MTG1Q9BT17 334 aaPredicted RBP7.09□□□□□ -1.27
CACNA1A-203ENST00000573891 C1QTNF1Q9BXJ1 281 aa7.09□□□□□ -1.27
CACNA1A-203ENST00000573891 SCN10AQ9Y5Y9 1956 aa7.09□□□□□ -1.27
CACNA1A-203ENST00000573891 GBF1Q92538 1859 aa7.09□□□□□ -1.28
CACNA1A-203ENST00000573891 WDR19Q8NEZ3 1342 aa7.08□□□□□ -1.28
CACNA1A-203ENST00000573891 SALL3Q9BXA9 1300 aa7.08□□□□□ -1.28
CACNA1A-203ENST00000573891 PTPDC1A2A3K4 754 aa7.08□□□□□ -1.28
CACNA1A-203ENST00000573891 RFXAPO00287 272 aa7.08□□□□□ -1.28
CACNA1A-203ENST00000573891 NKRFO15226 690 aaKnown RBP eCLIP7.08□□□□□ -1.28
CACNA1A-203ENST00000573891 KPNA6O60684 536 aa7.08□□□□□ -1.28
CACNA1A-203ENST00000573891 MYL3P08590 195 aa7.08□□□□□ -1.28
CACNA1A-203ENST00000573891 IQCF3P0C7M6 154 aa7.08□□□□□ -1.28
CACNA1A-203ENST00000573891 SNHG28P0DPA3 235 aa7.08□□□□□ -1.28
CACNA1A-203ENST00000573891 TOP1P11387 765 aaKnown RBP7.08□□□□□ -1.28
CACNA1A-203ENST00000573891 MX1P20591 662 aa7.08□□□□□ -1.28
CACNA1A-203ENST00000573891 PSEN2P49810 448 aa7.08□□□□□ -1.28
CACNA1A-203ENST00000573891 RPS6P62753 249 aaKnown RBP7.08□□□□□ -1.28
CACNA1A-203ENST00000573891 TAP1Q03518 808 aa7.08□□□□□ -1.28
CACNA1A-203ENST00000573891 PTPN11Q06124 597 aaPredicted RBP7.08□□□□□ -1.28
CACNA1A-203ENST00000573891 PPP2R5BQ15173 497 aa7.08□□□□□ -1.28
CACNA1A-203ENST00000573891 ALX1Q15699 326 aa7.08□□□□□ -1.28
CACNA1A-203ENST00000573891 CRTC2Q53ET0 693 aaPredicted RBP7.08□□□□□ -1.28
CACNA1A-203ENST00000573891 BRDTQ58F21 947 aaPredicted RBP7.08□□□□□ -1.28
CACNA1A-203ENST00000573891 VPS53Q5VIR6 699 aa7.08□□□□□ -1.28
CACNA1A-203ENST00000573891 HERC6Q8IVU3 1022 aa7.08□□□□□ -1.28
CACNA1A-203ENST00000573891 DNERQ8NFT8 737 aa7.08□□□□□ -1.28
CACNA1A-203ENST00000573891 OR6J1Q8NGC5 347 aa7.08□□□□□ -1.28
CACNA1A-203ENST00000573891 SCFD2Q8WU76 684 aa7.08□□□□□ -1.28
CACNA1A-203ENST00000573891 ANP32BQ92688 251 aaKnown RBP7.08□□□□□ -1.28
CACNA1A-203ENST00000573891 CTAGE1Q96RT6 745 aa7.08□□□□□ -1.28
CACNA1A-203ENST00000573891 TCP11L1Q9NUJ3 509 aa7.08□□□□□ -1.28
CACNA1A-203ENST00000573891 FKBPLQ9UIM3 349 aa7.08□□□□□ -1.28
CACNA1A-203ENST00000573891 PNMA2Q9UL42 364 aa7.08□□□□□ -1.28
CACNA1A-203ENST00000573891 COG5Q9UP83 839 aa7.08□□□□□ -1.28
CACNA1A-203ENST00000573891 SLC27A5Q9Y2P5 690 aa7.08□□□□□ -1.28
CACNA1A-203ENST00000573891 REV3LO60673 3130 aa7.07□□□□□ -1.28
CACNA1A-203ENST00000573891 FRMPD2Q68DX3 1309 aaPredicted RBP7.07□□□□□ -1.28
CACNA1A-203ENST00000573891 RAD50Q92878 1312 aa7.07□□□□□ -1.28
CACNA1A-203ENST00000573891 LPXNO60711 386 aa7.07□□□□□ -1.28
CACNA1A-203ENST00000573891 BAIAP3O94812 1187 aa7.07□□□□□ -1.28
CACNA1A-203ENST00000573891 ARIH2O95376 493 aa7.07□□□□□ -1.28
CACNA1A-203ENST00000573891 F12P00748 615 aaPredicted RBP7.07□□□□□ -1.28
CACNA1A-203ENST00000573891 PDHBP11177 359 aa7.07□□□□□ -1.28
CACNA1A-203ENST00000573891 CALML3P27482 149 aa7.07□□□□□ -1.28
CACNA1A-203ENST00000573891 ZNF543Q08ER8 600 aa7.07□□□□□ -1.28
CACNA1A-203ENST00000573891 PTK7Q13308 1070 aa7.07□□□□□ -1.28
CACNA1A-203ENST00000573891 BFSP2Q13515 415 aa7.07□□□□□ -1.28
CACNA1A-203ENST00000573891 FAM47CQ5HY64 1035 aa7.07□□□□□ -1.28
CACNA1A-203ENST00000573891 KRT40Q6A162 431 aa7.07□□□□□ -1.28
CACNA1A-203ENST00000573891 RNF207Q6ZRF8 634 aa7.07□□□□□ -1.28
CACNA1A-203ENST00000573891 SESTD1Q86VW0 696 aa7.07□□□□□ -1.28
CACNA1A-203ENST00000573891 PPP1R13LQ8WUF5 828 aa7.07□□□□□ -1.28
CACNA1A-203ENST00000573891 ARNTL2Q8WYA1 636 aa7.07□□□□□ -1.28
CACNA1A-203ENST00000573891 COPS5Q92905 334 aa7.07□□□□□ -1.28
CACNA1A-203ENST00000573891 CLP1Q92989 425 aaKnown RBP7.07□□□□□ -1.28
CACNA1A-203ENST00000573891 TRIM44Q96DX7 344 aaPredicted RBP7.07□□□□□ -1.28
CACNA1A-203ENST00000573891 TMEM47Q9BQJ4 181 aa7.07□□□□□ -1.28
CACNA1A-203ENST00000573891 CERS4Q9HA82 394 aa7.07□□□□□ -1.28
CACNA1A-203ENST00000573891 ZMYM6O95789 1325 aa7.06□□□□□ -1.28
CACNA1A-203ENST00000573891 TET1Q8NFU7 2136 aa7.06□□□□□ -1.28
CACNA1A-203ENST00000573891 KIF28PB7ZC32 967 aa7.06□□□□□ -1.28
CACNA1A-203ENST00000573891 SNPHO15079 494 aa7.06□□□□□ -1.28
CACNA1A-203ENST00000573891 ACTN4O43707 911 aaKnown RBP7.06□□□□□ -1.28
CACNA1A-203ENST00000573891 TLL1O43897 1013 aa7.06□□□□□ -1.28
CACNA1A-203ENST00000573891 FGAP02671 866 aa7.06□□□□□ -1.28
CACNA1A-203ENST00000573891 TXNP10599 105 aaKnown RBP7.06□□□□□ -1.28
CACNA1A-203ENST00000573891 RBL2Q08999 1139 aa7.06□□□□□ -1.28
CACNA1A-203ENST00000573891 GRB10Q13322 594 aa7.06□□□□□ -1.28
CACNA1A-203ENST00000573891 GPNMBQ14956 572 aa7.06□□□□□ -1.28
CACNA1A-203ENST00000573891 KMT5BQ4FZB7 885 aa7.06□□□□□ -1.28
CACNA1A-203ENST00000573891 DIEXFQ68CQ4 756 aaKnown RBP7.06□□□□□ -1.28
CACNA1A-203ENST00000573891 CCDC62Q6P9F0 684 aa7.06□□□□□ -1.28
CACNA1A-203ENST00000573891 SPRED2Q7Z698 418 aa7.06□□□□□ -1.28
CACNA1A-203ENST00000573891 EXOC8Q8IYI6 725 aa7.06□□□□□ -1.28
CACNA1A-203ENST00000573891 CAGE1Q8TC20 777 aa7.06□□□□□ -1.28
CACNA1A-203ENST00000573891 AFAP1L1Q8TED9 768 aa7.06□□□□□ -1.28
CACNA1A-203ENST00000573891 FAM122AQ96E09 287 aa7.06□□□□□ -1.28
CACNA1A-203ENST00000573891 MPHOSPH6Q99547 160 aaKnown RBP7.06□□□□□ -1.28
CACNA1A-203ENST00000573891 FTOQ9C0B1 505 aaKnown RBP eCLIP7.06□□□□□ -1.28
CACNA1A-203ENST00000573891 MAF1Q9H063 256 aa7.06□□□□□ -1.28
CACNA1A-203ENST00000573891 TOMM22Q9NS69 142 aa7.06□□□□□ -1.28
CACNA1A-203ENST00000573891 NOD1Q9Y239 953 aa7.06□□□□□ -1.28
CACNA1A-203ENST00000573891 SUPT16HQ9Y5B9 1047 aaKnown RBP7.06□□□□□ -1.28
CACNA1A-203ENST00000573891 TANC1Q9C0D5 1861 aa7.06□□□□□ -1.28
CACNA1A-203ENST00000573891 SCN5AQ14524 2016 aa7.05□□□□□ -1.28
CACNA1A-203ENST00000573891 LCHNA4D1U4 455 aa7.05□□□□□ -1.28
CACNA1A-203ENST00000573891 SOWAHDA6NJG2 315 aa7.05□□□□□ -1.28
CACNA1A-203ENST00000573891 B4DLN1 442 aa7.05□□□□□ -1.28
CACNA1A-203ENST00000573891 CXCL10P02778 98 aa7.05□□□□□ -1.28
CACNA1A-203ENST00000573891 MMP3P08254 477 aa7.05□□□□□ -1.28
CACNA1A-203ENST00000573891 PCP11498 1178 aaKnown RBP7.05□□□□□ -1.28
CACNA1A-203ENST00000573891 SELPP16109 830 aa7.05□□□□□ -1.28
CACNA1A-203ENST00000573891 MRPL12P52815 198 aaKnown RBP7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms