RNA–Protein interactions for RNA: ENST00000573857.5

TVP23A-208, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-208ENST00000573857 SMARCC2Q8TAQ2 1214 aa16.49■□□□□ 0.23
TVP23A-208ENST00000573857 CUL5Q93034 780 aa16.49■□□□□ 0.23
TVP23A-208ENST00000573857 ASB2Q96Q27 587 aa16.49■□□□□ 0.23
TVP23A-208ENST00000573857 TUT1Q9H6E5 874 aaKnown RBP16.49■□□□□ 0.23
TVP23A-208ENST00000573857 RTEL1Q9NZ71 1219 aa16.49■□□□□ 0.23
TVP23A-208ENST00000573857 MYH7BA7E2Y1 1941 aa16.49■□□□□ 0.23
TVP23A-208ENST00000573857 C17orf102A2RUQ5 167 aa16.48■□□□□ 0.23
TVP23A-208ENST00000573857 CCDC69A6NI79 296 aa16.48■□□□□ 0.23
TVP23A-208ENST00000573857 MEIS2O14770 477 aa16.48■□□□□ 0.23
TVP23A-208ENST00000573857 POU3F3P20264 500 aaPredicted RBP16.48■□□□□ 0.23
TVP23A-208ENST00000573857 MRPS5P82675 430 aaKnown RBP16.48■□□□□ 0.23
TVP23A-208ENST00000573857 NEDD9Q14511 834 aa16.48■□□□□ 0.23
TVP23A-208ENST00000573857 CREB3L3Q68CJ9 461 aa16.48■□□□□ 0.23
TVP23A-208ENST00000573857 XRRA1Q6P2D8 792 aa16.48■□□□□ 0.23
TVP23A-208ENST00000573857 CYFIP1Q7L576 1253 aa16.48■□□□□ 0.23
TVP23A-208ENST00000573857 TMCO2Q7Z6W1 182 aaPredicted RBP16.48■□□□□ 0.23
TVP23A-208ENST00000573857 ARNTL2Q8WYA1 636 aa16.48■□□□□ 0.23
TVP23A-208ENST00000573857 MTCH2Q9Y6C9 303 aa16.48■□□□□ 0.23
TVP23A-208ENST00000573857 LCHNA4D1U4 455 aa16.47■□□□□ 0.23
TVP23A-208ENST00000573857 GTPBP6O43824 516 aaPredicted RBP16.47■□□□□ 0.23
TVP23A-208ENST00000573857 EFCAB14O75071 495 aa16.47■□□□□ 0.23
TVP23A-208ENST00000573857 SMIM10L2AP0DMW4 78 aa16.47■□□□□ 0.23
TVP23A-208ENST00000573857 SMIM10L2BP0DMW5 78 aa16.47■□□□□ 0.23
TVP23A-208ENST00000573857 CALM1P0DP23 149 aa16.47■□□□□ 0.23
TVP23A-208ENST00000573857 CALM2P0DP24 149 aa16.47■□□□□ 0.23
TVP23A-208ENST00000573857 CALM3P0DP25 149 aa16.47■□□□□ 0.23
TVP23A-208ENST00000573857 RXRAP19793 462 aa16.47■□□□□ 0.23
TVP23A-208ENST00000573857 THPOP40225 353 aa16.47■□□□□ 0.23
TVP23A-208ENST00000573857 LIFRP42702 1097 aa16.47■□□□□ 0.23
TVP23A-208ENST00000573857 IKBKEQ14164 716 aa16.47■□□□□ 0.23
TVP23A-208ENST00000573857 NECTIN1Q15223 517 aa16.47■□□□□ 0.23
TVP23A-208ENST00000573857 CMTR1Q8N1G2 835 aaKnown RBP16.47■□□□□ 0.23
TVP23A-208ENST00000573857 ATP6V0A1Q93050 837 aa16.47■□□□□ 0.23
TVP23A-208ENST00000573857 GPR20Q99678 358 aa16.47■□□□□ 0.23
TVP23A-208ENST00000573857 ZBED2Q9BTP6 218 aa16.47■□□□□ 0.23
TVP23A-208ENST00000573857 USP26Q9BXU7 913 aa16.47■□□□□ 0.23
TVP23A-208ENST00000573857 TSPYL2Q9H2G4 693 aaPredicted RBP16.47■□□□□ 0.23
TVP23A-208ENST00000573857 PRRC2BQ5JSZ5 2229 aaKnown RBP16.47■□□□□ 0.23
TVP23A-208ENST00000573857 EMSYQ7Z589 1322 aa16.46■□□□□ 0.23
TVP23A-208ENST00000573857 RSPH10B2B2RC85 870 aa16.46■□□□□ 0.23
TVP23A-208ENST00000573857 RBAK-RBAKDNI3L0D1 243 aa16.46■□□□□ 0.23
TVP23A-208ENST00000573857 LGR5O75473 907 aa16.46■□□□□ 0.23
TVP23A-208ENST00000573857 GJB5O95377 273 aa16.46■□□□□ 0.23
TVP23A-208ENST00000573857 RSPH10BP0C881 870 aa16.46■□□□□ 0.23
TVP23A-208ENST00000573857 SPRED2Q7Z698 418 aa16.46■□□□□ 0.23
TVP23A-208ENST00000573857 TRIM50Q86XT4 487 aa16.46■□□□□ 0.23
TVP23A-208ENST00000573857 SENP7Q9BQF6 1050 aa16.46■□□□□ 0.23
TVP23A-208ENST00000573857 PSTPIP2Q9H939 334 aa16.46■□□□□ 0.23
TVP23A-208ENST00000573857 ANO2Q9NQ90 1003 aa16.46■□□□□ 0.23
TVP23A-208ENST00000573857 SLC12A7Q9Y666 1083 aa16.46■□□□□ 0.23
TVP23A-208ENST00000573857 PTPRSQ13332 1948 aa16.45■□□□□ 0.22
TVP23A-208ENST00000573857 TREHO43280 583 aa16.45■□□□□ 0.22
TVP23A-208ENST00000573857 BMP2KLQ5H9B9 411 aa16.45■□□□□ 0.22
TVP23A-208ENST00000573857 KRT40Q6A162 431 aa16.45■□□□□ 0.22
TVP23A-208ENST00000573857 NLRX1Q86UT6 975 aa16.45■□□□□ 0.22
TVP23A-208ENST00000573857 RAB11FIP4Q86YS3 637 aa16.45■□□□□ 0.22
TVP23A-208ENST00000573857 RAD9AQ99638 391 aa16.45■□□□□ 0.22
TVP23A-208ENST00000573857 LRRC2Q9BYS8 371 aa16.45■□□□□ 0.22
TVP23A-208ENST00000573857 RNPEPQ9H4A4 650 aa16.45■□□□□ 0.22
TVP23A-208ENST00000573857 ZNF215Q9UL58 517 aaPredicted RBP16.45■□□□□ 0.22
TVP23A-208ENST00000573857 TELO2Q9Y4R8 837 aa16.45■□□□□ 0.22
TVP23A-208ENST00000573857 hCG_1642624A0A1W2PR95 340 aa16.44■□□□□ 0.22
TVP23A-208ENST00000573857 TNFRSF10AO00220 468 aa16.44■□□□□ 0.22
TVP23A-208ENST00000573857 CAND2O75155 1236 aa16.44■□□□□ 0.22
TVP23A-208ENST00000573857 GNAT1P11488 350 aa16.44■□□□□ 0.22
TVP23A-208ENST00000573857 SP4Q02446 784 aa16.44■□□□□ 0.22
TVP23A-208ENST00000573857 GRB10Q13322 594 aa16.44■□□□□ 0.22
TVP23A-208ENST00000573857 MKRN4PQ13434 485 aaPredicted RBP16.44■□□□□ 0.22
TVP23A-208ENST00000573857 TMTC3Q6ZXV5 915 aa16.44■□□□□ 0.22
TVP23A-208ENST00000573857 SGMS1Q86VZ5 419 aa16.44■□□□□ 0.22
TVP23A-208ENST00000573857 FANCBQ8NB91 859 aa16.44■□□□□ 0.22
TVP23A-208ENST00000573857 DBF4BQ8NFT6 615 aa16.44■□□□□ 0.22
TVP23A-208ENST00000573857 ADAMTS19Q8TE59 1207 aa16.44■□□□□ 0.22
TVP23A-208ENST00000573857 GPRASP2Q96D09 838 aa16.44■□□□□ 0.22
TVP23A-208ENST00000573857 SETD4Q9NVD3 440 aa16.44■□□□□ 0.22
TVP23A-208ENST00000573857 NCOR1O75376 2440 aa16.43■□□□□ 0.22
TVP23A-208ENST00000573857 LPXNO60711 386 aa16.43■□□□□ 0.22
TVP23A-208ENST00000573857 ITGB5P18084 799 aa16.43■□□□□ 0.22
TVP23A-208ENST00000573857 SKIV2LQ15477 1246 aaKnown RBP16.43■□□□□ 0.22
TVP23A-208ENST00000573857 UBE2SQ16763 222 aa16.43■□□□□ 0.22
TVP23A-208ENST00000573857 PLEKHG4Q58EX7 1191 aa16.43■□□□□ 0.22
TVP23A-208ENST00000573857 UTP14CQ5TAP6 766 aaKnown RBP16.43■□□□□ 0.22
TVP23A-208ENST00000573857 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.43■□□□□ 0.22
TVP23A-208ENST00000573857 MICU3Q86XE3 530 aa16.43■□□□□ 0.22
TVP23A-208ENST00000573857 CCDC82Q8N4S0 544 aa16.43■□□□□ 0.22
TVP23A-208ENST00000573857 GIMAP8Q8ND71 665 aaPredicted RBP16.43■□□□□ 0.22
TVP23A-208ENST00000573857 IL27Q8NEV9 243 aa16.43■□□□□ 0.22
TVP23A-208ENST00000573857 CDHR1Q96JP9 859 aa16.43■□□□□ 0.22
TVP23A-208ENST00000573857 LINC01553A4QN01 128 aa16.42■□□□□ 0.22
TVP23A-208ENST00000573857 AMHP03971 560 aa16.42■□□□□ 0.22
TVP23A-208ENST00000573857 CTSHP09668 335 aa16.42■□□□□ 0.22
TVP23A-208ENST00000573857 KCNA2P16389 499 aa16.42■□□□□ 0.22
TVP23A-208ENST00000573857 ADAM17P78536 824 aa16.42■□□□□ 0.22
TVP23A-208ENST00000573857 TFF2Q03403 129 aa16.42■□□□□ 0.22
TVP23A-208ENST00000573857 RNF20Q5VTR2 975 aa16.42■□□□□ 0.22
TVP23A-208ENST00000573857 FAM117BQ6P1L5 589 aa16.42■□□□□ 0.22
TVP23A-208ENST00000573857 HEATR3Q7Z4Q2 680 aa16.42■□□□□ 0.22
TVP23A-208ENST00000573857 SKAP1Q86WV1 359 aa16.42■□□□□ 0.22
TVP23A-208ENST00000573857 GDPD5Q8WTR4 605 aa16.42■□□□□ 0.22
TVP23A-208ENST00000573857 LMBR1Q8WVP7 490 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms