RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 CYFIP1Q7L576 1253 aa11.17□□□□□ -0.62
SMG6-213ENST00000573166 EXOC8Q8IYI6 725 aa11.17□□□□□ -0.62
SMG6-213ENST00000573166 JPH1Q9HDC5 661 aaPredicted RBP11.17□□□□□ -0.62
SMG6-213ENST00000573166 KMT5AQ9NQR1 393 aa11.17□□□□□ -0.62
SMG6-213ENST00000573166 DYNC1LI2O43237 492 aaPredicted RBP11.17□□□□□ -0.62
SMG6-213ENST00000573166 TNNI1P19237 187 aa11.17□□□□□ -0.62
SMG6-213ENST00000573166 GABPAQ06546 454 aa11.17□□□□□ -0.62
SMG6-213ENST00000573166 LRRC41Q15345 812 aa11.17□□□□□ -0.62
SMG6-213ENST00000573166 DEFB115Q30KQ5 88 aa11.17□□□□□ -0.62
SMG6-213ENST00000573166 ARMCX5Q6P1M9 558 aa11.17□□□□□ -0.62
SMG6-213ENST00000573166 FBXL16Q8N461 479 aa11.17□□□□□ -0.62
SMG6-213ENST00000573166 E9PMD0 336 aa11.17□□□□□ -0.62
SMG6-213ENST00000573166 ALDH1A1P00352 501 aa11.17□□□□□ -0.62
SMG6-213ENST00000573166 GAP43P17677 238 aa11.17□□□□□ -0.62
SMG6-213ENST00000573166 FCGRTP55899 365 aa11.17□□□□□ -0.62
SMG6-213ENST00000573166 SHROOM1Q2M3G4 852 aaPredicted RBP11.17□□□□□ -0.62
SMG6-213ENST00000573166 RGMBQ6NW40 437 aa11.17□□□□□ -0.62
SMG6-213ENST00000573166 SH3BP5LQ7L8J4 393 aa11.17□□□□□ -0.62
SMG6-213ENST00000573166 PLEKHH3Q7Z736 793 aa11.17□□□□□ -0.62
SMG6-213ENST00000573166 ZNF579Q8NAF0 562 aaKnown RBP11.17□□□□□ -0.62
SMG6-213ENST00000573166 FAM167AQ96KS9 214 aa11.17□□□□□ -0.62
SMG6-213ENST00000573166 PARVGQ9HBI0 331 aa11.17□□□□□ -0.62
SMG6-213ENST00000573166 ZNF302Q9NR11 478 aa11.17□□□□□ -0.62
SMG6-213ENST00000573166 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.17□□□□□ -0.62
SMG6-213ENST00000573166 TAB2Q9NYJ8 693 aa11.17□□□□□ -0.62
SMG6-213ENST00000573166 ANKFY1Q9P2R3 1169 aa11.17□□□□□ -0.62
SMG6-213ENST00000573166 A0A1W2PRG0 241 aa11.17□□□□□ -0.62
SMG6-213ENST00000573166 POTEFA5A3E0 1075 aa11.17□□□□□ -0.62
SMG6-213ENST00000573166 POTEIP0CG38 1075 aa11.17□□□□□ -0.62
SMG6-213ENST00000573166 SRGAP2CP0DJJ0 459 aa11.17□□□□□ -0.62
SMG6-213ENST00000573166 TAL1P17542 331 aaPredicted RBP11.17□□□□□ -0.62
SMG6-213ENST00000573166 POTEGQ6S5H5 508 aa11.17□□□□□ -0.62
SMG6-213ENST00000573166 POTEEQ6S8J3 1075 aa11.17□□□□□ -0.62
SMG6-213ENST00000573166 CCDC186Q7Z3E2 898 aa11.17□□□□□ -0.62
SMG6-213ENST00000573166 WDR18Q9BV38 432 aa11.17□□□□□ -0.62
SMG6-213ENST00000573166 SOCS7O14512 581 aa11.16□□□□□ -0.62
SMG6-213ENST00000573166 ZSCAN12O43309 604 aa11.16□□□□□ -0.62
SMG6-213ENST00000573166 PTGS1P23219 599 aa11.16□□□□□ -0.62
SMG6-213ENST00000573166 RESP18Q5W5W9 173 aa11.16□□□□□ -0.62
SMG6-213ENST00000573166 SMYD4Q8IYR2 804 aaPredicted RBP11.16□□□□□ -0.62
SMG6-213ENST00000573166 PROCA1Q8NCQ7 364 aaPredicted RBP11.16□□□□□ -0.62
SMG6-213ENST00000573166 SCFD2Q8WU76 684 aa11.16□□□□□ -0.62
SMG6-213ENST00000573166 POMGNT1Q8WZA1 660 aa11.16□□□□□ -0.62
SMG6-213ENST00000573166 NLRP4Q96MN2 994 aa11.16□□□□□ -0.62
SMG6-213ENST00000573166 LXNQ9BS40 222 aa11.16□□□□□ -0.62
SMG6-213ENST00000573166 POLD4Q9HCU8 107 aa11.16□□□□□ -0.62
SMG6-213ENST00000573166 LUC7L2Q9Y383 392 aaKnown RBP11.16□□□□□ -0.62
SMG6-213ENST00000573166 PITPNM2Q9BZ72 1349 aa11.16□□□□□ -0.62
SMG6-213ENST00000573166 MARF1Q9Y4F3 1742 aaKnown RBP11.16□□□□□ -0.62
SMG6-213ENST00000573166 SFI1A8K8P3 1242 aa11.16□□□□□ -0.62
SMG6-213ENST00000573166 TRPA1O75762 1119 aa11.16□□□□□ -0.62
SMG6-213ENST00000573166 KRT19P08727 400 aa11.16□□□□□ -0.62
SMG6-213ENST00000573166 C6orf222P0C671 652 aaPredicted RBP11.16□□□□□ -0.62
SMG6-213ENST00000573166 ZNF445P59923 1031 aa11.16□□□□□ -0.62
SMG6-213ENST00000573166 CBX1P83916 185 aa11.16□□□□□ -0.62
SMG6-213ENST00000573166 CCDC181Q5TID7 509 aa11.16□□□□□ -0.62
SMG6-213ENST00000573166 GOLGA5Q8TBA6 731 aa11.16□□□□□ -0.62
SMG6-213ENST00000573166 NEK9Q8TD19 979 aa11.16□□□□□ -0.62
SMG6-213ENST00000573166 NLRP7Q8WX94 980 aa11.16□□□□□ -0.62
SMG6-213ENST00000573166 SYNCQ9H7C4 482 aa11.16□□□□□ -0.62
SMG6-213ENST00000573166 ZKSCAN5Q9Y2L8 839 aa11.16□□□□□ -0.62
SMG6-213ENST00000573166 MAPK4P31152 587 aa11.16□□□□□ -0.62
SMG6-213ENST00000573166 PSMC5P62195 406 aa11.16□□□□□ -0.62
SMG6-213ENST00000573166 FANCCQ00597 558 aa11.16□□□□□ -0.62
SMG6-213ENST00000573166 DLK2Q6UY11 383 aa11.16□□□□□ -0.62
SMG6-213ENST00000573166 MXRA8Q9BRK3 442 aa11.16□□□□□ -0.62
SMG6-213ENST00000573166 RGL1Q9NZL6 768 aa11.16□□□□□ -0.62
SMG6-213ENST00000573166 AGTPBP1Q9UPW5 1226 aa11.16□□□□□ -0.62
SMG6-213ENST00000573166 MYL1P05976 194 aa11.15□□□□□ -0.62
SMG6-213ENST00000573166 DDIT3P35638 169 aa11.15□□□□□ -0.62
SMG6-213ENST00000573166 OR6J1Q8NGC5 347 aa11.15□□□□□ -0.62
SMG6-213ENST00000573166 CCDC127Q96BQ5 260 aa11.15□□□□□ -0.62
SMG6-213ENST00000573166 PAGE5Q96GU1 130 aa11.15□□□□□ -0.62
SMG6-213ENST00000573166 GMLQ99445 158 aa11.15□□□□□ -0.62
SMG6-213ENST00000573166 EIF2AK1Q9BQI3 630 aaKnown RBP11.15□□□□□ -0.62
SMG6-213ENST00000573166 TRMT1Q9NXH9 659 aaKnown RBP11.15□□□□□ -0.62
SMG6-213ENST00000573166 ARMCX3Q9UH62 379 aaPredicted RBP11.15□□□□□ -0.62
SMG6-213ENST00000573166 SYNPO2Q9UMS6 1093 aa11.15□□□□□ -0.62
SMG6-213ENST00000573166 KCNH4Q9UQ05 1017 aa11.15□□□□□ -0.62
SMG6-213ENST00000573166 CYTH3O43739 400 aa11.15□□□□□ -0.62
SMG6-213ENST00000573166 NOP2P46087 812 aaKnown RBP11.15□□□□□ -0.62
SMG6-213ENST00000573166 ADAM9Q13443 819 aa11.15□□□□□ -0.62
SMG6-213ENST00000573166 EPHA7Q15375 998 aa11.15□□□□□ -0.62
SMG6-213ENST00000573166 PADI6Q6TGC4 694 aa11.15□□□□□ -0.62
SMG6-213ENST00000573166 FAM217BQ9NTX9 383 aaPredicted RBP11.15□□□□□ -0.62
SMG6-213ENST00000573166 NHSQ6T4R5 1651 aa11.15□□□□□ -0.62
SMG6-213ENST00000573166 USP2O75604 605 aaPredicted RBP11.15□□□□□ -0.62
SMG6-213ENST00000573166 PRPHP41219 470 aa11.15□□□□□ -0.62
SMG6-213ENST00000573166 STAT5BP51692 787 aa11.15□□□□□ -0.62
SMG6-213ENST00000573166 INHBEP58166 350 aa11.15□□□□□ -0.62
SMG6-213ENST00000573166 PKN1Q16512 942 aa11.15□□□□□ -0.62
SMG6-213ENST00000573166 MCPH1Q8NEM0 835 aa11.15□□□□□ -0.62
SMG6-213ENST00000573166 DDX12PQ92771 950 aa11.15□□□□□ -0.62
SMG6-213ENST00000573166 KCNH7Q9NS40 1196 aa11.15□□□□□ -0.62
SMG6-213ENST00000573166 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.15□□□□□ -0.625e-9■■■■■ 28.9
SMG6-213ENST00000573166 EIF3JO75822 258 aaKnown RBP11.14□□□□□ -0.63
SMG6-213ENST00000573166 XRCC5P13010 732 aaKnown RBP11.14□□□□□ -0.63
SMG6-213ENST00000573166 PEX3P56589 373 aa11.14□□□□□ -0.63
SMG6-213ENST00000573166 XRRA1Q6P2D8 792 aa11.14□□□□□ -0.63
SMG6-213ENST00000573166 SEPT1Q8WYJ6 367 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms