RNA–Protein interactions for RNA: ENST00000573100.1

SMIM28-201, Transcript of small integral membrane protein 28, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMIM28, Length 855 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28-201ENST00000573100 RNF41Q9H4P4 317 aaPredicted RBP14.31□□□□□ -0.12
SMIM28-201ENST00000573100 TUT1Q9H6E5 874 aaKnown RBP14.31□□□□□ -0.12
SMIM28-201ENST00000573100 MLXIPQ9HAP2 919 aa14.31□□□□□ -0.12
SMIM28-201ENST00000573100 TECTAO75443 2155 aa14.31□□□□□ -0.12
SMIM28-201ENST00000573100 PTPRZ1P23471 2315 aaPredicted RBP14.31□□□□□ -0.12
SMIM28-201ENST00000573100 KIAA1217Q5T5P2 1943 aa14.31□□□□□ -0.12
SMIM28-201ENST00000573100 C5orf67F2Z3F1 127 aa14.3□□□□□ -0.12
SMIM28-201ENST00000573100 STXBP3O00186 592 aa14.3□□□□□ -0.12
SMIM28-201ENST00000573100 GRM6O15303 877 aa14.3□□□□□ -0.12
SMIM28-201ENST00000573100 SMIM10L2AP0DMW4 78 aa14.3□□□□□ -0.12
SMIM28-201ENST00000573100 SMIM10L2BP0DMW5 78 aa14.3□□□□□ -0.12
SMIM28-201ENST00000573100 TGFB3P10600 412 aa14.3□□□□□ -0.12
SMIM28-201ENST00000573100 SP2Q02086 613 aa14.3□□□□□ -0.12
SMIM28-201ENST00000573100 SMAD4Q13485 552 aaKnown RBP14.3□□□□□ -0.12
SMIM28-201ENST00000573100 PKN1Q16512 942 aa14.3□□□□□ -0.12
SMIM28-201ENST00000573100 CCDC178Q5BJE1 867 aa14.3□□□□□ -0.12
SMIM28-201ENST00000573100 BMP8AQ7Z5Y6 402 aa14.3□□□□□ -0.12
SMIM28-201ENST00000573100 VSIG10LQ86VR7 867 aa14.3□□□□□ -0.12
SMIM28-201ENST00000573100 FAM227BQ96M60 508 aa14.3□□□□□ -0.12
SMIM28-201ENST00000573100 PHOX2BQ99453 314 aa14.3□□□□□ -0.12
SMIM28-201ENST00000573100 PDCD2LQ9BRP1 358 aa14.3□□□□□ -0.12
SMIM28-201ENST00000573100 IGFLR1Q9H665 355 aa14.3□□□□□ -0.12
SMIM28-201ENST00000573100 KAT14Q9H8E8 782 aa14.3□□□□□ -0.12
SMIM28-201ENST00000573100 JMJD4Q9H9V9 463 aa14.3□□□□□ -0.12
SMIM28-201ENST00000573100 RWDD3Q9Y3V2 267 aa14.3□□□□□ -0.12
SMIM28-201ENST00000573100 USP34Q70CQ2 3546 aa14.3□□□□□ -0.12
SMIM28-201ENST00000573100 MYH7BA7E2Y1 1941 aa14.29□□□□□ -0.12
SMIM28-201ENST00000573100 A0A0D9SFI3 127 aa14.29□□□□□ -0.12
SMIM28-201ENST00000573100 ST18O60284 1047 aa14.29□□□□□ -0.12
SMIM28-201ENST00000573100 GNAT1P11488 350 aa14.29□□□□□ -0.12
SMIM28-201ENST00000573100 HOXC8P31273 242 aa14.29□□□□□ -0.12
SMIM28-201ENST00000573100 HSD17B4P51659 736 aa14.29□□□□□ -0.12
SMIM28-201ENST00000573100 PTPN5P54829 565 aa14.29□□□□□ -0.12
SMIM28-201ENST00000573100 ASPRV1Q53RT3 343 aa14.29□□□□□ -0.12
SMIM28-201ENST00000573100 STOX1Q6ZVD7 989 aa14.29□□□□□ -0.12
SMIM28-201ENST00000573100 IQCA1Q86XH1 822 aa14.29□□□□□ -0.12
SMIM28-201ENST00000573100 TBC1D10CQ8IV04 446 aa14.29□□□□□ -0.12
SMIM28-201ENST00000573100 PRSS33Q8NF86 280 aa14.29□□□□□ -0.12
SMIM28-201ENST00000573100 PBXIP1Q96AQ6 731 aa14.29□□□□□ -0.12
SMIM28-201ENST00000573100 PRRX2Q99811 253 aa14.29□□□□□ -0.12
SMIM28-201ENST00000573100 AMNQ9BXJ7 453 aa14.29□□□□□ -0.12
SMIM28-201ENST00000573100 MAP3K20Q9NYL2 800 aaKnown RBP14.29□□□□□ -0.12
SMIM28-201ENST00000573100 CD207Q9UJ71 328 aa14.29□□□□□ -0.12
SMIM28-201ENST00000573100 ZMYM6O95789 1325 aa14.29□□□□□ -0.12
SMIM28-201ENST00000573100 PARP1P09874 1014 aaKnown RBP14.28□□□□□ -0.12
SMIM28-201ENST00000573100 UBA1P22314 1058 aaKnown RBP14.28□□□□□ -0.12
SMIM28-201ENST00000573100 ADAM15Q13444 863 aa14.28□□□□□ -0.12
SMIM28-201ENST00000573100 IER5LQ5T953 404 aa14.28□□□□□ -0.12
SMIM28-201ENST00000573100 TRIM67Q6ZTA4 783 aa14.28□□□□□ -0.12
SMIM28-201ENST00000573100 CFAP54Q96N23 3096 aa14.28□□□□□ -0.12
SMIM28-201ENST00000573100 USP26Q9BXU7 913 aa14.28□□□□□ -0.12
SMIM28-201ENST00000573100 SETD4Q9NVD3 440 aa14.28□□□□□ -0.12
SMIM28-201ENST00000573100 ZBTB47Q9UFB7 747 aaPredicted RBP14.28□□□□□ -0.12
SMIM28-201ENST00000573100 SPTBN4Q9H254 2564 aa14.28□□□□□ -0.12
SMIM28-201ENST00000573100 TMEM221A6NGB7 291 aa14.27□□□□□ -0.13
SMIM28-201ENST00000573100 M0R296 226 aa14.27□□□□□ -0.13
SMIM28-201ENST00000573100 NOP56O00567 594 aaKnown RBP14.27□□□□□ -0.13
SMIM28-201ENST00000573100 OPLAHO14841 1288 aa14.27□□□□□ -0.13
SMIM28-201ENST00000573100 LGALS2P05162 132 aa14.27□□□□□ -0.13
SMIM28-201ENST00000573100 GTF2F1P35269 517 aaKnown RBP eCLIP14.27□□□□□ -0.13
SMIM28-201ENST00000573100 NT5C2P49902 561 aa14.27□□□□□ -0.13
SMIM28-201ENST00000573100 GHRHRQ02643 423 aa14.27□□□□□ -0.13
SMIM28-201ENST00000573100 PGM5Q15124 567 aa14.27□□□□□ -0.13
SMIM28-201ENST00000573100 FAM26DQ5JW98 314 aa14.27□□□□□ -0.13
SMIM28-201ENST00000573100 ZNF589Q86UQ0 364 aaPredicted RBP14.27□□□□□ -0.13
SMIM28-201ENST00000573100 TICAM2Q86XR7 235 aa14.27□□□□□ -0.13
SMIM28-201ENST00000573100 SUGP1Q8IWZ8 645 aaKnown RBP14.27□□□□□ -0.13
SMIM28-201ENST00000573100 PCDHB15Q9Y5E8 787 aa14.27□□□□□ -0.13
SMIM28-201ENST00000573100 NEDD4P46934 1319 aa14.26□□□□□ -0.13
SMIM28-201ENST00000573100 SALL3Q9BXA9 1300 aa14.26□□□□□ -0.13
SMIM28-201ENST00000573100 ZNF213O14771 459 aa14.26□□□□□ -0.13
SMIM28-201ENST00000573100 LINC01565O15544 149 aa14.26□□□□□ -0.13
SMIM28-201ENST00000573100 KDM4AO75164 1064 aa14.26□□□□□ -0.13
SMIM28-201ENST00000573100 TBX10O75333 385 aa14.26□□□□□ -0.13
SMIM28-201ENST00000573100 LINC00271P0C7V0 271 aa14.26□□□□□ -0.13
SMIM28-201ENST00000573100 CCND2P30279 289 aa14.26□□□□□ -0.13
SMIM28-201ENST00000573100 HOXA13P31271 388 aaPredicted RBP14.26□□□□□ -0.13
SMIM28-201ENST00000573100 NMIQ13287 307 aaPredicted RBP14.26□□□□□ -0.13
SMIM28-201ENST00000573100 BTG3Q14201 252 aaPredicted RBP14.26□□□□□ -0.13
SMIM28-201ENST00000573100 SAMD3Q8N6K7 520 aa14.26□□□□□ -0.13
SMIM28-201ENST00000573100 IL31RAQ8NI17 732 aa14.26□□□□□ -0.13
SMIM28-201ENST00000573100 GPKOWQ92917 476 aaPredicted RBP eCLIP14.26□□□□□ -0.13
SMIM28-201ENST00000573100 CLP1Q92989 425 aaKnown RBP14.26□□□□□ -0.13
SMIM28-201ENST00000573100 PPP2R3CQ969Q6 453 aa14.26□□□□□ -0.13
SMIM28-201ENST00000573100 ZFP91Q96JP5 570 aaPredicted RBP14.26□□□□□ -0.13
SMIM28-201ENST00000573100 ZSCAN10Q96SZ4 725 aaPredicted RBP14.26□□□□□ -0.13
SMIM28-201ENST00000573100 PLVAPQ9BX97 442 aa14.26□□□□□ -0.13
SMIM28-201ENST00000573100 BCAS3Q9H6U6 928 aa14.26□□□□□ -0.13
SMIM28-201ENST00000573100 ALG13Q9NP73 1137 aaKnown RBP14.26□□□□□ -0.13
SMIM28-201ENST00000573100 PCDHA1Q9Y5I3 950 aa14.26□□□□□ -0.13
SMIM28-201ENST00000573100 COL4A6Q14031 1691 aa14.26□□□□□ -0.13
SMIM28-201ENST00000573100 CCDC171Q6TFL3 1326 aa14.25□□□□□ -0.13
SMIM28-201ENST00000573100 ADGRA3Q8IWK6 1321 aa14.25□□□□□ -0.13
SMIM28-201ENST00000573100 TRIM6-TRIM34B2RNG4 842 aa14.25□□□□□ -0.13
SMIM28-201ENST00000573100 ENPP3O14638 875 aa14.25□□□□□ -0.13
SMIM28-201ENST00000573100 CSPG5O95196 566 aa14.25□□□□□ -0.13
SMIM28-201ENST00000573100 EYA4O95677 639 aa14.25□□□□□ -0.13
SMIM28-201ENST00000573100 MMP1P03956 469 aa14.25□□□□□ -0.13
SMIM28-201ENST00000573100 NDUFV1P49821 464 aa14.25□□□□□ -0.13
SMIM28-201ENST00000573100 ANKRD45Q5TZF3 282 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms