RNA–Protein interactions for RNA: ENST00000571688.5

LITAF-209, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-209ENST00000571688 CALRP27797 417 aaKnown RBP18.46■□□□□ 0.55
LITAF-209ENST00000571688 RIPK1Q13546 671 aa18.46■□□□□ 0.55
LITAF-209ENST00000571688 ZKSCAN8Q15776 578 aaPredicted RBP18.46■□□□□ 0.55
LITAF-209ENST00000571688 CHRNA2Q15822 529 aa18.46■□□□□ 0.55
LITAF-209ENST00000571688 ERMARDQ5T6L9 678 aa18.46■□□□□ 0.55
LITAF-209ENST00000571688 UBLCP1Q8WVY7 318 aaPredicted RBP18.46■□□□□ 0.55
LITAF-209ENST00000571688 CHMP6Q96FZ7 201 aa18.46■□□□□ 0.55
LITAF-209ENST00000571688 CNOT10Q9H9A5 744 aaKnown RBP18.46■□□□□ 0.55
LITAF-209ENST00000571688 CEP72Q9P209 647 aa18.46■□□□□ 0.55
LITAF-209ENST00000571688 BAIAP2L1Q9UHR4 511 aa18.46■□□□□ 0.55
LITAF-209ENST00000571688 SLC12A4Q9UP95 1085 aa18.46■□□□□ 0.55
LITAF-209ENST00000571688 NHSL1Q5SYE7 1610 aa18.46■□□□□ 0.55
LITAF-209ENST00000571688 FGFR1OPO95684 399 aaKnown RBP18.45■□□□□ 0.54
LITAF-209ENST00000571688 FLT3P36888 993 aa18.45■□□□□ 0.54
LITAF-209ENST00000571688 BCAMP50895 628 aa18.45■□□□□ 0.54
LITAF-209ENST00000571688 PPP1R7Q15435 360 aa18.45■□□□□ 0.54
LITAF-209ENST00000571688 CCDC197Q8NCU1 140 aa18.45■□□□□ 0.54
LITAF-209ENST00000571688 TBC1D31Q96DN5 1066 aa18.45■□□□□ 0.54
LITAF-209ENST00000571688 STAMBPL1Q96FJ0 436 aa18.45■□□□□ 0.54
LITAF-209ENST00000571688 RIOK1Q9BRS2 568 aaKnown RBP18.45■□□□□ 0.54
LITAF-209ENST00000571688 CICQ96RK0 1608 aaPredicted RBP18.45■□□□□ 0.54
LITAF-209ENST00000571688 BUB1BO60566 1050 aaPredicted RBP18.45■□□□□ 0.54
LITAF-209ENST00000571688 AMPD3Q01432 767 aa18.45■□□□□ 0.54
LITAF-209ENST00000571688 SLC18A3Q16572 532 aa18.45■□□□□ 0.54
LITAF-209ENST00000571688 TXNRD1Q16881 649 aa18.45■□□□□ 0.54
LITAF-209ENST00000571688 SFMBT2Q5VUG0 894 aa18.45■□□□□ 0.54
LITAF-209ENST00000571688 ACTRT1Q8TDG2 376 aa18.45■□□□□ 0.54
LITAF-209ENST00000571688 TAF4BQ92750 862 aa18.45■□□□□ 0.54
LITAF-209ENST00000571688 GPKOWQ92917 476 aaPredicted RBP eCLIP18.45■□□□□ 0.54
LITAF-209ENST00000571688 TLCD1Q96CP7 247 aa18.45■□□□□ 0.54
LITAF-209ENST00000571688 CALR3Q96L12 384 aaKnown RBP18.45■□□□□ 0.54
LITAF-209ENST00000571688 XPO6Q96QU8 1125 aaKnown RBP18.45■□□□□ 0.54
LITAF-209ENST00000571688 PSMD1Q99460 953 aa18.45■□□□□ 0.54
LITAF-209ENST00000571688 FAM129AQ9BZQ8 928 aa18.45■□□□□ 0.54
LITAF-209ENST00000571688 TCP11L1Q9NUJ3 509 aa18.45■□□□□ 0.54
LITAF-209ENST00000571688 PCDHA6Q9UN73 950 aa18.45■□□□□ 0.54
LITAF-209ENST00000571688 ATP6V0A2Q9Y487 856 aa18.45■□□□□ 0.54
LITAF-209ENST00000571688 PCDHA8Q9Y5H6 950 aa18.45■□□□□ 0.54
LITAF-209ENST00000571688 CASZ1Q86V15 1759 aa18.45■□□□□ 0.54
LITAF-209ENST00000571688 CCDC88AQ3V6T2 1871 aa18.44■□□□□ 0.54
LITAF-209ENST00000571688 INF2Q27J81 1249 aa18.44■□□□□ 0.54
LITAF-209ENST00000571688 LRRC55Q6ZSA7 311 aa18.44■□□□□ 0.54
LITAF-209ENST00000571688 TMC3Q7Z5M5 1100 aa18.44■□□□□ 0.54
LITAF-209ENST00000571688 ZCRB1Q8TBF4 217 aaKnown RBP18.44■□□□□ 0.54
LITAF-209ENST00000571688 NSMCE1Q8WV22 266 aa18.44■□□□□ 0.54
LITAF-209ENST00000571688 BRIP1Q9BX63 1249 aa18.44■□□□□ 0.54
LITAF-209ENST00000571688 NLRC4Q9NPP4 1024 aa18.44■□□□□ 0.54
LITAF-209ENST00000571688 TRMT112Q9UI30 125 aaKnown RBP18.44■□□□□ 0.54
LITAF-209ENST00000571688 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.44■□□□□ 0.54
LITAF-209ENST00000571688 A0A0G2JS52 829 aa18.44■□□□□ 0.54
LITAF-209ENST00000571688 KCNK3O14649 394 aa18.44■□□□□ 0.54
LITAF-209ENST00000571688 NMT2O60551 498 aa18.44■□□□□ 0.54
LITAF-209ENST00000571688 NOL4O94818 638 aa18.44■□□□□ 0.54
LITAF-209ENST00000571688 CCNHP51946 323 aaPredicted RBP18.44■□□□□ 0.54
LITAF-209ENST00000571688 NKX1-1Q15270 411 aaPredicted RBP18.44■□□□□ 0.54
LITAF-209ENST00000571688 RPS6KA1Q15418 735 aa18.44■□□□□ 0.54
LITAF-209ENST00000571688 ANKS1AQ92625 1134 aa18.44■□□□□ 0.54
LITAF-209ENST00000571688 PBKQ96KB5 322 aa18.44■□□□□ 0.54
LITAF-209ENST00000571688 A0A1B0GUL6 1792 aa18.44■□□□□ 0.54
LITAF-209ENST00000571688 CACNA1SQ13698 1873 aa18.43■□□□□ 0.54
LITAF-209ENST00000571688 KIF4AO95239 1232 aa18.43■□□□□ 0.54
LITAF-209ENST00000571688 LRRC63Q05C16 580 aa18.43■□□□□ 0.54
LITAF-209ENST00000571688 KRT71Q3SY84 523 aa18.43■□□□□ 0.54
LITAF-209ENST00000571688 CCDC63Q8NA47 563 aa18.43■□□□□ 0.54
LITAF-209ENST00000571688 TBC1D5Q92609 795 aa18.43■□□□□ 0.54
LITAF-209ENST00000571688 ZNF317Q96PQ6 595 aaPredicted RBP18.43■□□□□ 0.54
LITAF-209ENST00000571688 C15orf41Q9Y2V0 281 aa18.43■□□□□ 0.54
LITAF-209ENST00000571688 BTNL10A8MVZ5 291 aa18.43■□□□□ 0.54
LITAF-209ENST00000571688 F8VZ95 297 aa18.43■□□□□ 0.54
LITAF-209ENST00000571688 SART1O43290 800 aaKnown RBP18.43■□□□□ 0.54
LITAF-209ENST00000571688 MYO1EQ12965 1108 aa18.43■□□□□ 0.54
LITAF-209ENST00000571688 KIAA0753Q2KHM9 967 aa18.43■□□□□ 0.54
LITAF-209ENST00000571688 FAM83BQ5T0W9 1011 aa18.43■□□□□ 0.54
LITAF-209ENST00000571688 GUF1Q8N442 669 aaKnown RBP18.43■□□□□ 0.54
LITAF-209ENST00000571688 DAGLBQ8NCG7 672 aa18.43■□□□□ 0.54
LITAF-209ENST00000571688 CCHCR1Q8TD31 782 aa18.43■□□□□ 0.54
LITAF-209ENST00000571688 PACSIN1Q9BY11 444 aa18.43■□□□□ 0.54
LITAF-209ENST00000571688 C1orf167Q5SNV9 1468 aa18.42■□□□□ 0.54
LITAF-209ENST00000571688 USP11P51784 963 aa18.42■□□□□ 0.54
LITAF-209ENST00000571688 ITIH4Q14624 930 aa18.42■□□□□ 0.54
LITAF-209ENST00000571688 LRRC4CQ9HCJ2 640 aa18.42■□□□□ 0.54
LITAF-209ENST00000571688 A0A087X0T9 212 aa18.42■□□□□ 0.54
LITAF-209ENST00000571688 ASAP2O43150 1006 aa18.42■□□□□ 0.54
LITAF-209ENST00000571688 FAM228BP0C875 321 aa18.42■□□□□ 0.54
LITAF-209ENST00000571688 ZBTB48P10074 688 aaPredicted RBP18.42■□□□□ 0.54
LITAF-209ENST00000571688 MDM1Q8TC05 714 aa18.42■□□□□ 0.54
LITAF-209ENST00000571688 CFAP73A6NFT4 308 aa18.41■□□□□ 0.54
LITAF-209ENST00000571688 SKAP2O75563 359 aaPredicted RBP18.41■□□□□ 0.54
LITAF-209ENST00000571688 KIF5BP33176 963 aa18.41■□□□□ 0.54
LITAF-209ENST00000571688 PIGWQ7Z7B1 504 aa18.41■□□□□ 0.54
LITAF-209ENST00000571688 ANKS4BQ8N8V4 417 aa18.41■□□□□ 0.54
LITAF-209ENST00000571688 SEC14L1Q92503 715 aa18.41■□□□□ 0.54
LITAF-209ENST00000571688 DAPK3O43293 454 aa18.41■□□□□ 0.54
LITAF-209ENST00000571688 CTNND1O60716 968 aaKnown RBP18.41■□□□□ 0.54
LITAF-209ENST00000571688 OR52Z1P0C646 297 aa18.41■□□□□ 0.54
LITAF-209ENST00000571688 TOM1L2Q6ZVM7 507 aa18.41■□□□□ 0.54
LITAF-209ENST00000571688 UNC13DQ70J99 1090 aa18.41■□□□□ 0.54
LITAF-209ENST00000571688 DNAJC10Q8IXB1 793 aa18.41■□□□□ 0.54
LITAF-209ENST00000571688 THOC1Q96FV9 657 aaKnown RBP18.41■□□□□ 0.54
LITAF-209ENST00000571688 L3MBTL3Q96JM7 780 aaPredicted RBP18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms