RNA–Protein interactions for RNA: ENST00000571186.5

CIITA-205, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 1,041 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-205ENST00000571186 IL31RAQ8NI17 732 aa16.6■□□□□ 0.25
CIITA-205ENST00000571186 C16orf70Q9BSU1 422 aa16.6■□□□□ 0.25
CIITA-205ENST00000571186 CNNM2Q9H8M5 875 aa16.6■□□□□ 0.25
CIITA-205ENST00000571186 MAP3K20Q9NYL2 800 aaKnown RBP16.6■□□□□ 0.25
CIITA-205ENST00000571186 CTNNA3Q9UI47 895 aa16.6■□□□□ 0.25
CIITA-205ENST00000571186 H3BRB1 525 aa16.59■□□□□ 0.25
CIITA-205ENST00000571186 ZBTB5O15062 677 aa16.59■□□□□ 0.25
CIITA-205ENST00000571186 PPP1R11O60927 126 aaPredicted RBP16.59■□□□□ 0.25
CIITA-205ENST00000571186 CCND2P30279 289 aa16.59■□□□□ 0.25
CIITA-205ENST00000571186 HTRA4P83105 476 aaPredicted RBP16.59■□□□□ 0.25
CIITA-205ENST00000571186 PTPROQ16827 1216 aa16.59■□□□□ 0.25
CIITA-205ENST00000571186 EPC2Q52LR7 807 aa16.59■□□□□ 0.25
CIITA-205ENST00000571186 PTCRAQ6ISU1 281 aaPredicted RBP16.59■□□□□ 0.25
CIITA-205ENST00000571186 FCHSD1Q86WN1 690 aa16.59■□□□□ 0.25
CIITA-205ENST00000571186 HOMER1Q86YM7 354 aa16.59■□□□□ 0.25
CIITA-205ENST00000571186 SAMD3Q8N6K7 520 aa16.59■□□□□ 0.25
CIITA-205ENST00000571186 SEPT8Q92599 483 aa16.59■□□□□ 0.25
CIITA-205ENST00000571186 GPKOWQ92917 476 aaPredicted RBP eCLIP16.59■□□□□ 0.25
CIITA-205ENST00000571186 MRPL38Q96DV4 380 aaKnown RBP16.59■□□□□ 0.25
CIITA-205ENST00000571186 DSCC1Q9BVC3 393 aa16.59■□□□□ 0.25
CIITA-205ENST00000571186 TUT1Q9H6E5 874 aaKnown RBP16.59■□□□□ 0.25
CIITA-205ENST00000571186 C5orf42Q9H799 3197 aa16.59■□□□□ 0.25
CIITA-205ENST00000571186 PIEZO1Q92508 2521 aa16.58■□□□□ 0.25
CIITA-205ENST00000571186 GCOM1H8Y6P7 765 aaPredicted RBP16.58■□□□□ 0.24
CIITA-205ENST00000571186 TREHO43280 583 aa16.58■□□□□ 0.24
CIITA-205ENST00000571186 POLR2MP0CAP2 368 aa16.58■□□□□ 0.24
CIITA-205ENST00000571186 SMIM10L2AP0DMW4 78 aa16.58■□□□□ 0.24
CIITA-205ENST00000571186 SMIM10L2BP0DMW5 78 aa16.58■□□□□ 0.24
CIITA-205ENST00000571186 IL9P15248 144 aa16.58■□□□□ 0.24
CIITA-205ENST00000571186 UBA1P22314 1058 aaKnown RBP16.58■□□□□ 0.24
CIITA-205ENST00000571186 GHRHRQ02643 423 aa16.58■□□□□ 0.24
CIITA-205ENST00000571186 PTH1RQ03431 593 aa16.58■□□□□ 0.24
CIITA-205ENST00000571186 EP400NLQ6ZTU2 488 aa16.58■□□□□ 0.24
CIITA-205ENST00000571186 MTMR8Q96EF0 704 aa16.58■□□□□ 0.24
CIITA-205ENST00000571186 SAMD11Q96NU1 681 aa16.58■□□□□ 0.24
CIITA-205ENST00000571186 YME1L1Q96TA2 773 aa16.58■□□□□ 0.24
CIITA-205ENST00000571186 RNPEPQ9H4A4 650 aa16.58■□□□□ 0.24
CIITA-205ENST00000571186 BCAS3Q9H6U6 928 aa16.58■□□□□ 0.24
CIITA-205ENST00000571186 MAD2L2Q9UI95 211 aa16.58■□□□□ 0.24
CIITA-205ENST00000571186 GRXCR2A6NFK2 248 aa16.57■□□□□ 0.24
CIITA-205ENST00000571186 NOP56O00567 594 aaKnown RBP16.57■□□□□ 0.24
CIITA-205ENST00000571186 CTSHP09668 335 aa16.57■□□□□ 0.24
CIITA-205ENST00000571186 MKRN4PQ13434 485 aaPredicted RBP16.57■□□□□ 0.24
CIITA-205ENST00000571186 GPM6BQ13491 265 aa16.57■□□□□ 0.24
CIITA-205ENST00000571186 SP7Q8TDD2 431 aaPredicted RBP16.57■□□□□ 0.24
CIITA-205ENST00000571186 TOP1MTQ969P6 601 aa16.57■□□□□ 0.24
CIITA-205ENST00000571186 UIMC1Q96RL1 719 aa16.57■□□□□ 0.24
CIITA-205ENST00000571186 TRIOO75962 3097 aa16.56■□□□□ 0.24
CIITA-205ENST00000571186 PALM3A6NDB9 673 aaPredicted RBP16.56■□□□□ 0.24
CIITA-205ENST00000571186 H3BQ06 376 aaPredicted RBP16.56■□□□□ 0.24
CIITA-205ENST00000571186 SGSM2O43147 1006 aa16.56■□□□□ 0.24
CIITA-205ENST00000571186 LGALS2P05162 132 aa16.56■□□□□ 0.24
CIITA-205ENST00000571186 TRAF1Q13077 416 aa16.56■□□□□ 0.24
CIITA-205ENST00000571186 SEC23AQ15436 765 aa16.56■□□□□ 0.24
CIITA-205ENST00000571186 PUS10Q3MIT2 529 aaKnown RBP16.56■□□□□ 0.24
CIITA-205ENST00000571186 CYB5R4Q7L1T6 521 aa16.56■□□□□ 0.24
CIITA-205ENST00000571186 BANK1Q8NDB2 785 aa16.56■□□□□ 0.24
CIITA-205ENST00000571186 RUFY2Q8WXA3 655 aa16.56■□□□□ 0.24
CIITA-205ENST00000571186 PIGSQ96S52 555 aa16.56■□□□□ 0.24
CIITA-205ENST00000571186 OSBPL7Q9BZF2 842 aa16.56■□□□□ 0.24
CIITA-205ENST00000571186 RALGAPA2Q2PPJ7 1873 aa16.56■□□□□ 0.24
CIITA-205ENST00000571186 H3BNC9 293 aa16.55■□□□□ 0.24
CIITA-205ENST00000571186 GNAT1P11488 350 aa16.55■□□□□ 0.24
CIITA-205ENST00000571186 TIGD5Q53EQ6 642 aa16.55■□□□□ 0.24
CIITA-205ENST00000571186 CYFIP1Q7L576 1253 aa16.55■□□□□ 0.24
CIITA-205ENST00000571186 TMEM192Q8IY95 271 aa16.55■□□□□ 0.24
CIITA-205ENST00000571186 USP26Q9BXU7 913 aa16.55■□□□□ 0.24
CIITA-205ENST00000571186 SETD4Q9NVD3 440 aa16.55■□□□□ 0.24
CIITA-205ENST00000571186 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.54■□□□□ 0.24
CIITA-205ENST00000571186 PRR33A8MZF0 331 aa16.54■□□□□ 0.24
CIITA-205ENST00000571186 ALADP13716 330 aa16.54■□□□□ 0.24
CIITA-205ENST00000571186 HOXC8P31273 242 aa16.54■□□□□ 0.24
CIITA-205ENST00000571186 TRDNQ13061 729 aa16.54■□□□□ 0.24
CIITA-205ENST00000571186 NEDD9Q14511 834 aa16.54■□□□□ 0.24
CIITA-205ENST00000571186 CSPP1Q1MSJ5 1256 aa16.54■□□□□ 0.24
CIITA-205ENST00000571186 GNPTABQ3T906 1256 aa16.54■□□□□ 0.24
CIITA-205ENST00000571186 BMP2KLQ5H9B9 411 aa16.54■□□□□ 0.24
CIITA-205ENST00000571186 TCEAL5Q5H9L2 206 aa16.54■□□□□ 0.24
CIITA-205ENST00000571186 NEK9Q8TD19 979 aa16.54■□□□□ 0.24
CIITA-205ENST00000571186 IFIH1Q9BYX4 1025 aaKnown RBP16.54■□□□□ 0.24
CIITA-205ENST00000571186 RIOX1Q9H6W3 641 aa16.54■□□□□ 0.24
CIITA-205ENST00000571186 PPP4R2Q9NY27 417 aa16.54■□□□□ 0.24
CIITA-205ENST00000571186 RTEL1Q9NZ71 1219 aa16.54■□□□□ 0.24
CIITA-205ENST00000571186 ATG2AQ2TAZ0 1938 aa16.53■□□□□ 0.24
CIITA-205ENST00000571186 PNMA6FA0A0J9YX94 578 aa16.53■□□□□ 0.24
CIITA-205ENST00000571186 CAND2O75155 1236 aa16.53■□□□□ 0.24
CIITA-205ENST00000571186 MRPS9P82933 396 aaKnown RBP16.53■□□□□ 0.24
CIITA-205ENST00000571186 GRM4Q14833 912 aa16.53■□□□□ 0.24
CIITA-205ENST00000571186 SLC35G1Q2M3R5 365 aa16.53■□□□□ 0.24
CIITA-205ENST00000571186 UTP14CQ5TAP6 766 aaKnown RBP16.53■□□□□ 0.24
CIITA-205ENST00000571186 PIBF1Q8WXW3 757 aa16.53■□□□□ 0.24
CIITA-205ENST00000571186 PABPC5Q96DU9 382 aaKnown RBP16.53■□□□□ 0.24
CIITA-205ENST00000571186 NSUN3Q9H649 340 aaKnown RBP16.53■□□□□ 0.24
CIITA-205ENST00000571186 FAM50BQ9Y247 325 aa16.53■□□□□ 0.24
CIITA-205ENST00000571186 TAF6LQ9Y6J9 622 aa16.53■□□□□ 0.24
CIITA-205ENST00000571186 WDFY4Q6ZS81 3184 aa16.53■□□□□ 0.24
CIITA-205ENST00000571186 LOXHD1Q8IVV2 1947 aa16.53■□□□□ 0.24
CIITA-205ENST00000571186 SPATA31C2B4DYI2 1134 aa16.52■□□□□ 0.24
CIITA-205ENST00000571186 IFIT3O14879 490 aaKnown RBP16.52■□□□□ 0.24
CIITA-205ENST00000571186 STAM2O75886 525 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms