RNA–Protein interactions for RNA: ENST00000571064.5

UBFD1-210, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 794 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-210ENST00000571064 HEATR3Q7Z4Q2 680 aa24.69■■□□□ 1.54
UBFD1-210ENST00000571064 HERC6Q8IVU3 1022 aa24.69■■□□□ 1.54
UBFD1-210ENST00000571064 PHOSPHO2Q8TCD6 241 aa24.69■■□□□ 1.54
UBFD1-210ENST00000571064 MRPL11Q9Y3B7 192 aaKnown RBP24.69■■□□□ 1.54
UBFD1-210ENST00000571064 LCTP09848 1927 aa24.69■■□□□ 1.54
UBFD1-210ENST00000571064 STXBP3O00186 592 aa24.68■■□□□ 1.54
UBFD1-210ENST00000571064 GPR37L1O60883 481 aa24.68■■□□□ 1.54
UBFD1-210ENST00000571064 CDKL5O76039 1030 aa24.68■■□□□ 1.54
UBFD1-210ENST00000571064 SCG2P13521 617 aa24.68■■□□□ 1.54
UBFD1-210ENST00000571064 PURAQ00577 322 aaKnown RBP24.68■■□□□ 1.54
UBFD1-210ENST00000571064 DUSP28Q4G0W2 176 aa24.68■■□□□ 1.54
UBFD1-210ENST00000571064 NSMFQ6X4W1 530 aa24.68■■□□□ 1.54
UBFD1-210ENST00000571064 AIFM3Q96NN9 605 aa24.68■■□□□ 1.54
UBFD1-210ENST00000571064 CD320Q9NPF0 282 aa24.68■■□□□ 1.54
UBFD1-210ENST00000571064 POLR3EQ9NVU0 708 aa24.68■■□□□ 1.54
UBFD1-210ENST00000571064 STK36Q9NRP7 1315 aa24.67■■□□□ 1.54
UBFD1-210ENST00000571064 PTPDC1A2A3K4 754 aa24.67■■□□□ 1.54
UBFD1-210ENST00000571064 LPXNO60711 386 aa24.67■■□□□ 1.54
UBFD1-210ENST00000571064 AKAP17AQ02040 695 aaKnown RBP24.67■■□□□ 1.54
UBFD1-210ENST00000571064 FAM47CQ5HY64 1035 aa24.67■■□□□ 1.54
UBFD1-210ENST00000571064 TRIM22Q8IYM9 498 aa24.67■■□□□ 1.54
UBFD1-210ENST00000571064 RGS22Q8NE09 1264 aa24.67■■□□□ 1.54
UBFD1-210ENST00000571064 SMARCC2Q8TAQ2 1214 aa24.67■■□□□ 1.54
UBFD1-210ENST00000571064 MORC4Q8TE76 937 aa24.67■■□□□ 1.54
UBFD1-210ENST00000571064 FTOQ9C0B1 505 aaKnown RBP eCLIP24.67■■□□□ 1.54
UBFD1-210ENST00000571064 BARHL2Q9NY43 387 aa24.67■■□□□ 1.54
UBFD1-210ENST00000571064 KIF28PB7ZC32 967 aa24.66■■□□□ 1.54
UBFD1-210ENST00000571064 DEXIO95424 95 aa24.66■■□□□ 1.54
UBFD1-210ENST00000571064 IQCF3P0C7M6 154 aa24.66■■□□□ 1.54
UBFD1-210ENST00000571064 TRAF1Q13077 416 aa24.66■■□□□ 1.54
UBFD1-210ENST00000571064 BAATQ14032 418 aaPredicted RBP24.66■■□□□ 1.54
UBFD1-210ENST00000571064 NBPF20Q3BBV1 942 aa24.66■■□□□ 1.54
UBFD1-210ENST00000571064 SLC30A10Q6XR72 485 aa24.66■■□□□ 1.54
UBFD1-210ENST00000571064 LLPHQ9BRT6 129 aaKnown RBP24.66■■□□□ 1.54
UBFD1-210ENST00000571064 WDR11Q9BZH6 1224 aa24.66■■□□□ 1.54
UBFD1-210ENST00000571064 ORC3Q9UBD5 711 aaPredicted RBP24.66■■□□□ 1.54
UBFD1-210ENST00000571064 RFC2P35250 354 aa24.65■■□□□ 1.54
UBFD1-210ENST00000571064 GHRHRQ02643 423 aa24.65■■□□□ 1.54
UBFD1-210ENST00000571064 MTG1Q9BT17 334 aaPredicted RBP24.65■■□□□ 1.54
UBFD1-210ENST00000571064 ADAMTS3O15072 1205 aa24.64■■□□□ 1.54
UBFD1-210ENST00000571064 CPT1AP50416 773 aa24.64■■□□□ 1.54
UBFD1-210ENST00000571064 RPS6P62753 249 aaKnown RBP24.64■■□□□ 1.54
UBFD1-210ENST00000571064 CUL4AQ13619 759 aa24.64■■□□□ 1.54
UBFD1-210ENST00000571064 RNF207Q6ZRF8 634 aa24.64■■□□□ 1.54
UBFD1-210ENST00000571064 RETREG2Q8NC44 543 aa24.64■■□□□ 1.54
UBFD1-210ENST00000571064 COL20A1Q9P218 1284 aa24.64■■□□□ 1.54
UBFD1-210ENST00000571064 LCHNA4D1U4 455 aa24.63■■□□□ 1.53
UBFD1-210ENST00000571064 PI4K2BG5E9Z4 385 aa24.63■■□□□ 1.53
UBFD1-210ENST00000571064 hCG_1984214I3L0E3 225 aa24.63■■□□□ 1.53
UBFD1-210ENST00000571064 K7ELQ4 463 aaPredicted RBP24.63■■□□□ 1.53
UBFD1-210ENST00000571064 PITPNM1O00562 1244 aa24.63■■□□□ 1.53
UBFD1-210ENST00000571064 HSD17B4P51659 736 aa24.63■■□□□ 1.53
UBFD1-210ENST00000571064 NAPAP54920 295 aa24.63■■□□□ 1.53
UBFD1-210ENST00000571064 TMCO2Q7Z6W1 182 aaPredicted RBP24.63■■□□□ 1.53
UBFD1-210ENST00000571064 MCF2L2Q86YR7 1114 aa24.63■■□□□ 1.53
UBFD1-210ENST00000571064 ZNF713Q8N859 430 aaPredicted RBP24.63■■□□□ 1.53
UBFD1-210ENST00000571064 TET1Q8NFU7 2136 aa24.63■■□□□ 1.53
UBFD1-210ENST00000571064 OR6J1Q8NGC5 347 aa24.63■■□□□ 1.53
UBFD1-210ENST00000571064 SYTL5Q8TDW5 730 aaPredicted RBP24.63■■□□□ 1.53
UBFD1-210ENST00000571064 VPS54Q9P1Q0 977 aa24.63■■□□□ 1.53
UBFD1-210ENST00000571064 COL4A4P53420 1690 aaPredicted RBP24.62■■□□□ 1.53
UBFD1-210ENST00000571064 CALML3P27482 149 aa24.62■■□□□ 1.53
UBFD1-210ENST00000571064 ALDH5A1P51649 535 aaPredicted RBP24.62■■□□□ 1.53
UBFD1-210ENST00000571064 PPP1R18Q6NYC8 613 aa24.62■■□□□ 1.53
UBFD1-210ENST00000571064 ALYREFQ86V81 257 aaKnown RBP24.62■■□□□ 1.53
UBFD1-210ENST00000571064 GDPD5Q8WTR4 605 aa24.62■■□□□ 1.53
UBFD1-210ENST00000571064 GJB4Q9NTQ9 266 aa24.62■■□□□ 1.53
UBFD1-210ENST00000571064 MEIS2O14770 477 aa24.61■■□□□ 1.53
UBFD1-210ENST00000571064 CFBP00751 764 aa24.61■■□□□ 1.53
UBFD1-210ENST00000571064 HOXA13P31271 388 aaPredicted RBP24.61■■□□□ 1.53
UBFD1-210ENST00000571064 NFRKBQ6P4R8 1299 aa24.61■■□□□ 1.53
UBFD1-210ENST00000571064 MAF1Q9H063 256 aa24.61■■□□□ 1.53
UBFD1-210ENST00000571064 SCN10AQ9Y5Y9 1956 aa24.61■■□□□ 1.53
UBFD1-210ENST00000571064 TANC1Q9C0D5 1861 aa24.6■■□□□ 1.53
UBFD1-210ENST00000571064 MUC6Q6W4X9 2439 aa24.6■■□□□ 1.53
UBFD1-210ENST00000571064 RBM47A0AV96 593 aaKnown RBP24.6■■□□□ 1.53
UBFD1-210ENST00000571064 SMCO2A6NFE2 343 aa24.6■■□□□ 1.53
UBFD1-210ENST00000571064 USP17L6PQ6QN14 398 aa24.6■■□□□ 1.53
UBFD1-210ENST00000571064 ALG1Q9BT22 464 aa24.6■■□□□ 1.53
UBFD1-210ENST00000571064 PSTPIP2Q9H939 334 aa24.6■■□□□ 1.53
UBFD1-210ENST00000571064 ADD3Q9UEY8 706 aaKnown RBP24.6■■□□□ 1.53
UBFD1-210ENST00000571064 PTPRSQ13332 1948 aa24.6■■□□□ 1.53
UBFD1-210ENST00000571064 GCOM1H8Y6P7 765 aaPredicted RBP24.59■■□□□ 1.53
UBFD1-210ENST00000571064 BAIAP3O94812 1187 aa24.59■■□□□ 1.53
UBFD1-210ENST00000571064 POLR2MP0CAP2 368 aa24.59■■□□□ 1.53
UBFD1-210ENST00000571064 BFSP2Q13515 415 aa24.59■■□□□ 1.53
UBFD1-210ENST00000571064 UBE2SQ16763 222 aa24.59■■□□□ 1.53
UBFD1-210ENST00000571064 COPS5Q92905 334 aa24.59■■□□□ 1.53
UBFD1-210ENST00000571064 TAAR1Q96RJ0 339 aa24.59■■□□□ 1.53
UBFD1-210ENST00000571064 ZMYND12Q9H0C1 365 aa24.59■■□□□ 1.53
UBFD1-210ENST00000571064 RIC8AQ9NPQ8 531 aa24.59■■□□□ 1.53
UBFD1-210ENST00000571064 SH3GLB2Q9NR46 395 aa24.59■■□□□ 1.53
UBFD1-210ENST00000571064 BRWD1Q9NSI6 2320 aa24.59■■□□□ 1.53
UBFD1-210ENST00000571064 ESYT2A0FGR8 921 aa24.58■■□□□ 1.53
UBFD1-210ENST00000571064 PIK3CDO00329 1044 aa24.58■■□□□ 1.53
UBFD1-210ENST00000571064 KCNJ6P48051 423 aa24.58■■□□□ 1.53
UBFD1-210ENST00000571064 CHMP4BP1P59074 171 aa24.58■■□□□ 1.53
UBFD1-210ENST00000571064 WDR5P61964 334 aaKnown RBP24.58■■□□□ 1.53
UBFD1-210ENST00000571064 HSCBQ8IWL3 235 aa24.58■■□□□ 1.53
UBFD1-210ENST00000571064 SAMD3Q8N6K7 520 aa24.58■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms