RNA–Protein interactions for RNA: ENST00000570276.5

ULK3-222, Transcript of unc-51 like kinase 3, human

TSL 1 (best)

Gene ULK3, Length 2,951 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ULK3-222	ENST00000570276	QPCT	Q16769	361 aa		18.79	■□□□□ 0.6
ULK3-222	ENST00000570276	TLDC1	Q6P9B6	456 aa		18.79	■□□□□ 0.6
ULK3-222	ENST00000570276	NLRP14	Q86W24	1093 aa		18.79	■□□□□ 0.6
ULK3-222	ENST00000570276	NELFCD	Q8IXH7	590 aa		18.79	■□□□□ 0.6
ULK3-222	ENST00000570276	TATDN2	Q93075	761 aa		18.79	■□□□□ 0.6
ULK3-222	ENST00000570276	CCDC47	Q96A33	483 aa	Known RBP	18.79	■□□□□ 0.6
ULK3-222	ENST00000570276	COA7	Q96BR5	231 aa		18.79	■□□□□ 0.6
ULK3-222	ENST00000570276	ERGIC2	Q96RQ1	377 aa		18.79	■□□□□ 0.6
ULK3-222	ENST00000570276	PIGS	Q96S52	555 aa		18.79	■□□□□ 0.6
ULK3-222	ENST00000570276	PACSIN1	Q9BY11	444 aa		18.79	■□□□□ 0.6
ULK3-222	ENST00000570276	LGR5	O75473	907 aa		18.79	■□□□□ 0.6
ULK3-222	ENST00000570276	FBXO33	Q7Z6M2	555 aa		18.79	■□□□□ 0.6
ULK3-222	ENST00000570276	CLEC10A	Q8IUN9	316 aa		18.79	■□□□□ 0.6
ULK3-222	ENST00000570276	KLHL7	Q8IXQ5	586 aa		18.79	■□□□□ 0.6
ULK3-222	ENST00000570276	MMGT1	Q8N4V1	131 aa		18.79	■□□□□ 0.6
ULK3-222	ENST00000570276	NSMCE1	Q8WV22	266 aa		18.79	■□□□□ 0.6
ULK3-222	ENST00000570276	KRT12	Q99456	494 aa		18.79	■□□□□ 0.6
ULK3-222	ENST00000570276	ATP8A2	Q9NTI2	1148 aa		18.79	■□□□□ 0.6
ULK3-222	ENST00000570276	FRMPD2	Q68DX3	1309 aa	Predicted RBP	18.78	■□□□□ 0.6
ULK3-222	ENST00000570276	TDP2	O95551	362 aa		18.78	■□□□□ 0.6
ULK3-222	ENST00000570276	CALR	P27797	417 aa	Known RBP	18.78	■□□□□ 0.6
ULK3-222	ENST00000570276	PAFAH1B1	P43034	410 aa		18.78	■□□□□ 0.6
ULK3-222	ENST00000570276	EHHADH	Q08426	723 aa		18.78	■□□□□ 0.6
ULK3-222	ENST00000570276	KLHDC7A	Q5VTJ3	777 aa		18.78	■□□□□ 0.6
ULK3-222	ENST00000570276	FGFBP2	Q9BYJ0	223 aa		18.78	■□□□□ 0.6
ULK3-222	ENST00000570276	HYOU1	Q9Y4L1	999 aa		18.78	■□□□□ 0.6
ULK3-222	ENST00000570276	C12orf60	Q5U649	245 aa		18.78	■□□□□ 0.6
ULK3-222	ENST00000570276	CCDC121	Q6ZUS5	278 aa		18.78	■□□□□ 0.6
ULK3-222	ENST00000570276	BLOC1S4	Q9NUP1	217 aa		18.78	■□□□□ 0.6
ULK3-222	ENST00000570276	SPATS2L	Q9NUQ6	558 aa	Known RBP	18.78	■□□□□ 0.6
ULK3-222	ENST00000570276	HSF2BP	O75031	334 aa		18.78	■□□□□ 0.6
ULK3-222	ENST00000570276	PALM	O75781	387 aa		18.78	■□□□□ 0.6
ULK3-222	ENST00000570276	GRM4	Q14833	912 aa		18.78	■□□□□ 0.6
ULK3-222	ENST00000570276	ARPP21	Q9UBL0	812 aa	Predicted RBP	18.78	■□□□□ 0.6
ULK3-222	ENST00000570276	BCOR	Q6W2J9	1755 aa		18.77	■□□□□ 0.6
ULK3-222	ENST00000570276	KIF3C	O14782	793 aa		18.77	■□□□□ 0.6
ULK3-222	ENST00000570276	SLC37A4	O43826	429 aa		18.77	■□□□□ 0.6
ULK3-222	ENST00000570276	HEXIM1	O94992	359 aa	Known RBP	18.77	■□□□□ 0.6
ULK3-222	ENST00000570276	RPS8	P62241	208 aa	Known RBP	18.77	■□□□□ 0.6
ULK3-222	ENST00000570276	GRB10	Q13322	594 aa		18.77	■□□□□ 0.6
ULK3-222	ENST00000570276	NONO	Q15233	471 aa	Known RBP eCLIP	18.77	■□□□□ 0.6
ULK3-222	ENST00000570276	IQCE	Q6IPM2	695 aa		18.77	■□□□□ 0.6
ULK3-222	ENST00000570276	SV2B	Q7L1I2	683 aa		18.77	■□□□□ 0.6
ULK3-222	ENST00000570276	FAM114A1	Q8IWE2	563 aa		18.77	■□□□□ 0.6
ULK3-222	ENST00000570276	FNBP4	Q8N3X1	1017 aa	Predicted RBP	18.77	■□□□□ 0.6
ULK3-222	ENST00000570276	RETREG2	Q8NC44	543 aa		18.77	■□□□□ 0.6
ULK3-222	ENST00000570276	OR2W6P	Q8NHA6	318 aa		18.77	■□□□□ 0.6
ULK3-222	ENST00000570276	EPN3	Q9H201	632 aa		18.77	■□□□□ 0.6
ULK3-222	ENST00000570276	SRP68	Q9UHB9	627 aa	Known RBP	18.77	■□□□□ 0.6
ULK3-222	ENST00000570276	POLR2F	P61218	127 aa	Known RBP	18.77	■□□□□ 0.59
ULK3-222	ENST00000570276	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	18.77	■□□□□ 0.59
ULK3-222	ENST00000570276	ALS2CR12	Q96Q35	445 aa		18.77	■□□□□ 0.59
ULK3-222	ENST00000570276	C7orf25	Q9BPX7	421 aa		18.77	■□□□□ 0.59
ULK3-222	ENST00000570276	ETAA1	Q9NY74	926 aa		18.77	■□□□□ 0.59
ULK3-222	ENST00000570276	GOLGA8K	D6RF30	607 aa		18.76	■□□□□ 0.59
ULK3-222	ENST00000570276	TMOD1	P28289	359 aa		18.76	■□□□□ 0.59
ULK3-222	ENST00000570276	KCNMA1	Q12791	1236 aa		18.76	■□□□□ 0.59
ULK3-222	ENST00000570276	PTGIS	Q16647	500 aa		18.76	■□□□□ 0.59
ULK3-222	ENST00000570276	NOC3L	Q8WTT2	800 aa	Known RBP	18.76	■□□□□ 0.59
ULK3-222	ENST00000570276	CALML4	Q96GE6	196 aa		18.76	■□□□□ 0.59
ULK3-222	ENST00000570276	CDK5RAP3	Q96JB5	506 aa		18.76	■□□□□ 0.59
ULK3-222	ENST00000570276	TACO1	Q9BSH4	297 aa	Known RBP	18.76	■□□□□ 0.59
ULK3-222	ENST00000570276	FAM167B	Q9BTA0	163 aa		18.76	■□□□□ 0.59
ULK3-222	ENST00000570276	SHANK3	Q9BYB0	1731 aa		18.76	■□□□□ 0.59
ULK3-222	ENST00000570276	KLRC1	P26715	233 aa		18.76	■□□□□ 0.59
ULK3-222	ENST00000570276	ECM1	Q16610	540 aa		18.76	■□□□□ 0.59
ULK3-222	ENST00000570276	TBC1D9B	Q66K14	1250 aa		18.76	■□□□□ 0.59
ULK3-222	ENST00000570276	CENPP	Q6IPU0	288 aa		18.76	■□□□□ 0.59
ULK3-222	ENST00000570276	DDX42	Q86XP3	938 aa	Known RBP eCLIP	18.76	■□□□□ 0.59
ULK3-222	ENST00000570276	BAP1	Q92560	729 aa		18.76	■□□□□ 0.59
ULK3-222	ENST00000570276	TBC1D5	Q92609	795 aa		18.76	■□□□□ 0.59
ULK3-222	ENST00000570276	NLRP3	Q96P20	1036 aa		18.76	■□□□□ 0.59
ULK3-222	ENST00000570276	PNMA5	Q96PV4	448 aa		18.76	■□□□□ 0.59
ULK3-222	ENST00000570276	ZHX3	Q9H4I2	956 aa		18.76	■□□□□ 0.59
ULK3-222	ENST00000570276	ADAMTS1	Q9UHI8	967 aa		18.76	■□□□□ 0.59
ULK3-222	ENST00000570276	STRCP1	A6NGW2	1772 aa		18.76	■□□□□ 0.59
ULK3-222	ENST00000570276	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	18.76	■□□□□ 0.59
ULK3-222	ENST00000570276	NPHP3-ACAD11	A0A0J9YXS1	232 aa		18.75	■□□□□ 0.59
ULK3-222	ENST00000570276	ZNF233	A6NK53	670 aa		18.75	■□□□□ 0.59
ULK3-222	ENST00000570276	TRAF5	O00463	557 aa		18.75	■□□□□ 0.59
ULK3-222	ENST00000570276	TLR2	O60603	784 aa		18.75	■□□□□ 0.59
ULK3-222	ENST00000570276	CNNM4	Q6P4Q7	775 aa		18.75	■□□□□ 0.59
ULK3-222	ENST00000570276	NEK8	Q86SG6	692 aa		18.75	■□□□□ 0.59
ULK3-222	ENST00000570276	DGKH	Q86XP1	1220 aa		18.75	■□□□□ 0.59
ULK3-222	ENST00000570276	TCP11	Q8WWU5	503 aa		18.75	■□□□□ 0.59
ULK3-222	ENST00000570276	TSGA10	Q9BZW7	698 aa		18.75	■□□□□ 0.59
ULK3-222	ENST00000570276	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	18.75	■□□□□ 0.59
ULK3-222	ENST00000570276	PPP1R37	O75864	691 aa		18.75	■□□□□ 0.59
ULK3-222	ENST00000570276	CCDC26	Q8TAB7	109 aa		18.75	■□□□□ 0.59
ULK3-222	ENST00000570276	DDX12P	Q92771	950 aa		18.75	■□□□□ 0.59
ULK3-222	ENST00000570276	DOCK2	Q92608	1830 aa		18.75	■□□□□ 0.59
ULK3-222	ENST00000570276	BUB1B	O60566	1050 aa	Predicted RBP	18.75	■□□□□ 0.59
ULK3-222	ENST00000570276	EPHB4	P54760	987 aa		18.75	■□□□□ 0.59
ULK3-222	ENST00000570276	CFAP58	Q5T655	872 aa		18.75	■□□□□ 0.59
ULK3-222	ENST00000570276	PNMA8A	Q86V59	439 aa	Predicted RBP	18.75	■□□□□ 0.59
ULK3-222	ENST00000570276	CACNA1S	Q13698	1873 aa		18.74	■□□□□ 0.59
ULK3-222	ENST00000570276	OPA1	O60313	960 aa		18.74	■□□□□ 0.59
ULK3-222	ENST00000570276	TCP1	P17987	556 aa	Known RBP	18.74	■□□□□ 0.59
ULK3-222	ENST00000570276	ADCY2	Q08462	1091 aa		18.74	■□□□□ 0.59
ULK3-222	ENST00000570276	ZKSCAN8	Q15776	578 aa	Predicted RBP	18.74	■□□□□ 0.59

Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms