RNA–Protein interactions for RNA: ENST00000570098.2

CHRFAM7A-207, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5

Gene CHRFAM7A, Length 316 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-207ENST00000570098 RALYLQ86SE5 291 aaKnown RBP2.55□□□□□ -2
CHRFAM7A-207ENST00000570098 VSIG10LQ86VR7 867 aa2.55□□□□□ -2
CHRFAM7A-207ENST00000570098 SESTD1Q86VW0 696 aa2.55□□□□□ -2
CHRFAM7A-207ENST00000570098 MCF2L2Q86YR7 1114 aa2.55□□□□□ -2
CHRFAM7A-207ENST00000570098 DHX37Q8IY37 1157 aaKnown RBP2.55□□□□□ -2
CHRFAM7A-207ENST00000570098 RPUSD2Q8IZ73 545 aaKnown RBP2.55□□□□□ -2
CHRFAM7A-207ENST00000570098 CMTR1Q8N1G2 835 aaKnown RBP2.55□□□□□ -2
CHRFAM7A-207ENST00000570098 SRBD1Q8N5C6 995 aaKnown RBP2.55□□□□□ -2
CHRFAM7A-207ENST00000570098 CNTNAP5Q8WYK1 1306 aa2.55□□□□□ -2
CHRFAM7A-207ENST00000570098 EMID1Q96A84 441 aaPredicted RBP2.55□□□□□ -2
CHRFAM7A-207ENST00000570098 TIFAQ96CG3 184 aa2.55□□□□□ -2
CHRFAM7A-207ENST00000570098 TCEANC2Q96MN5 208 aa2.55□□□□□ -2
CHRFAM7A-207ENST00000570098 SPZ1Q9BXG8 430 aa2.55□□□□□ -2
CHRFAM7A-207ENST00000570098 SEZ6LQ9BYH1 1024 aa2.55□□□□□ -2
CHRFAM7A-207ENST00000570098 DOCK9Q9BZ29 2069 aa2.55□□□□□ -2
CHRFAM7A-207ENST00000570098 OSBPL7Q9BZF2 842 aa2.55□□□□□ -2
CHRFAM7A-207ENST00000570098 MAF1Q9H063 256 aa2.55□□□□□ -2
CHRFAM7A-207ENST00000570098 GTF2IRD1Q9UHL9 959 aa2.55□□□□□ -2
CHRFAM7A-207ENST00000570098 PCDHA11Q9Y5I1 949 aa2.55□□□□□ -2
CHRFAM7A-207ENST00000570098 PCDHA1Q9Y5I3 950 aa2.55□□□□□ -2
CHRFAM7A-207ENST00000570098 MRVI1Q9Y6F6 885 aa2.55□□□□□ -2
CHRFAM7A-207ENST00000570098 SLC4A7Q9Y6M7 1214 aa2.55□□□□□ -2
CHRFAM7A-207ENST00000570098 TNRC6BQ9UPQ9 1833 aaKnown RBP2.54□□□□□ -2
CHRFAM7A-207ENST00000570098 COL4A2P08572 1712 aa2.54□□□□□ -2
CHRFAM7A-207ENST00000570098 VPS13AQ96RL7 3174 aa2.54□□□□□ -2
CHRFAM7A-207ENST00000570098 NID2Q14112 1375 aa2.54□□□□□ -2
CHRFAM7A-207ENST00000570098 LCHNA4D1U4 455 aa2.54□□□□□ -2
CHRFAM7A-207ENST00000570098 CCDC69A6NI79 296 aa2.54□□□□□ -2
CHRFAM7A-207ENST00000570098 TNFRSF10AO00220 468 aa2.54□□□□□ -2
CHRFAM7A-207ENST00000570098 PITPNM1O00562 1244 aa2.54□□□□□ -2
CHRFAM7A-207ENST00000570098 MEIS2O14770 477 aa2.54□□□□□ -2
CHRFAM7A-207ENST00000570098 ADAMTS3O15072 1205 aa2.54□□□□□ -2
CHRFAM7A-207ENST00000570098 TREHO43280 583 aa2.54□□□□□ -2
CHRFAM7A-207ENST00000570098 ATP9AO75110 1047 aa2.54□□□□□ -2
CHRFAM7A-207ENST00000570098 CXCL10P02778 98 aa2.54□□□□□ -2
CHRFAM7A-207ENST00000570098 LGALS2P05162 132 aa2.54□□□□□ -2
CHRFAM7A-207ENST00000570098 CA3P07451 260 aa2.54□□□□□ -2
CHRFAM7A-207ENST00000570098 PFKMP08237 780 aa2.54□□□□□ -2
CHRFAM7A-207ENST00000570098 SUPT20HL2P0C7V6 817 aa2.54□□□□□ -2
CHRFAM7A-207ENST00000570098 SMIM10L2AP0DMW4 78 aa2.54□□□□□ -2
CHRFAM7A-207ENST00000570098 SMIM10L2BP0DMW5 78 aa2.54□□□□□ -2
CHRFAM7A-207ENST00000570098 CKBP12277 381 aa2.54□□□□□ -2
CHRFAM7A-207ENST00000570098 ACTN1P12814 892 aa2.54□□□□□ -2
CHRFAM7A-207ENST00000570098 CPA1P15085 419 aa2.54□□□□□ -2
CHRFAM7A-207ENST00000570098 SELPP16109 830 aa2.54□□□□□ -2
CHRFAM7A-207ENST00000570098 KCNA2P16389 499 aa2.54□□□□□ -2
CHRFAM7A-207ENST00000570098 ATP2A2P16615 1042 aaKnown RBP2.54□□□□□ -2
CHRFAM7A-207ENST00000570098 CASTP20810 708 aaKnown RBP2.54□□□□□ -2
CHRFAM7A-207ENST00000570098 SMARCA1P28370 1054 aa2.54□□□□□ -2
CHRFAM7A-207ENST00000570098 HOXC8P31273 242 aa2.54□□□□□ -2
CHRFAM7A-207ENST00000570098 ICAM3P32942 547 aa2.54□□□□□ -2
CHRFAM7A-207ENST00000570098 MCM5P33992 734 aa2.54□□□□□ -2
CHRFAM7A-207ENST00000570098 RFC2P35250 354 aa2.54□□□□□ -2
CHRFAM7A-207ENST00000570098 WDR5P61964 334 aaKnown RBP2.54□□□□□ -2
CHRFAM7A-207ENST00000570098 TAP1Q03518 808 aa2.54□□□□□ -2
CHRFAM7A-207ENST00000570098 RBL2Q08999 1139 aa2.54□□□□□ -2
CHRFAM7A-207ENST00000570098 FUT2Q10981 343 aa2.54□□□□□ -2
CHRFAM7A-207ENST00000570098 PTK7Q13308 1070 aa2.54□□□□□ -2
CHRFAM7A-207ENST00000570098 MKRN4PQ13434 485 aaPredicted RBP2.54□□□□□ -2
CHRFAM7A-207ENST00000570098 BFSP2Q13515 415 aa2.54□□□□□ -2
CHRFAM7A-207ENST00000570098 LAMC2Q13753 1193 aa2.54□□□□□ -2
CHRFAM7A-207ENST00000570098 CCDC85BQ15834 202 aaPredicted RBP2.54□□□□□ -2
CHRFAM7A-207ENST00000570098 ADCK5Q3MIX3 580 aa2.54□□□□□ -2
CHRFAM7A-207ENST00000570098 BMP2KLQ5H9B9 411 aa2.54□□□□□ -2
CHRFAM7A-207ENST00000570098 ZNF618Q5T7W0 954 aa2.54□□□□□ -2
CHRFAM7A-207ENST00000570098 UTP14CQ5TAP6 766 aaKnown RBP2.54□□□□□ -2
CHRFAM7A-207ENST00000570098 PCNX4Q63HM2 1172 aa2.54□□□□□ -2
CHRFAM7A-207ENST00000570098 PPP2R2DQ66LE6 453 aa2.54□□□□□ -2
CHRFAM7A-207ENST00000570098 WWC2Q6AWC2 1192 aa2.54□□□□□ -2
CHRFAM7A-207ENST00000570098 TYW1BQ6NUM6 668 aa2.54□□□□□ -2
CHRFAM7A-207ENST00000570098 CNKSR3Q6P9H4 555 aa2.54□□□□□ -2
CHRFAM7A-207ENST00000570098 KCNV1Q6PIU1 500 aa2.54□□□□□ -2
CHRFAM7A-207ENST00000570098 APOA5Q6Q788 366 aa2.54□□□□□ -2
CHRFAM7A-207ENST00000570098 LIN28BQ6ZN17 250 aaKnown RBP eCLIP2.54□□□□□ -2
CHRFAM7A-207ENST00000570098 NFXL1Q6ZNB6 911 aa2.54□□□□□ -2
CHRFAM7A-207ENST00000570098 TMTC3Q6ZXV5 915 aa2.54□□□□□ -2
CHRFAM7A-207ENST00000570098 LRRC8DQ7L1W4 858 aa2.54□□□□□ -2
CHRFAM7A-207ENST00000570098 CENPQQ7L2Z9 268 aaPredicted RBP2.54□□□□□ -2
CHRFAM7A-207ENST00000570098 CYFIP1Q7L576 1253 aa2.54□□□□□ -2
CHRFAM7A-207ENST00000570098 SGMS1Q86VZ5 419 aa2.54□□□□□ -2
CHRFAM7A-207ENST00000570098 MICU3Q86XE3 530 aa2.54□□□□□ -2
CHRFAM7A-207ENST00000570098 TRIM50Q86XT4 487 aa2.54□□□□□ -2
CHRFAM7A-207ENST00000570098 HERC6Q8IVU3 1022 aa2.54□□□□□ -2
CHRFAM7A-207ENST00000570098 RASEFQ8IZ41 740 aa2.54□□□□□ -2
CHRFAM7A-207ENST00000570098 MICALL1Q8N3F8 863 aa2.54□□□□□ -2
CHRFAM7A-207ENST00000570098 SAMD3Q8N6K7 520 aa2.54□□□□□ -2
CHRFAM7A-207ENST00000570098 CCDC155Q8N6L0 562 aa2.54□□□□□ -2
CHRFAM7A-207ENST00000570098 C7orf31Q8N865 590 aa2.54□□□□□ -2
CHRFAM7A-207ENST00000570098 RETREG2Q8NC44 543 aa2.54□□□□□ -2
CHRFAM7A-207ENST00000570098 PPTC7Q8NI37 304 aa2.54□□□□□ -2
CHRFAM7A-207ENST00000570098 CTCFLQ8NI51 663 aaPredicted RBP2.54□□□□□ -2
CHRFAM7A-207ENST00000570098 SMARCC2Q8TAQ2 1214 aa2.54□□□□□ -2
CHRFAM7A-207ENST00000570098 CAGE1Q8TC20 777 aa2.54□□□□□ -2
CHRFAM7A-207ENST00000570098 AFAP1L1Q8TED9 768 aa2.54□□□□□ -2
CHRFAM7A-207ENST00000570098 PPM1EQ8WY54 764 aa2.54□□□□□ -2
CHRFAM7A-207ENST00000570098 CUL5Q93034 780 aa2.54□□□□□ -2
CHRFAM7A-207ENST00000570098 RRP36Q96EU6 259 aaKnown RBP2.54□□□□□ -2
CHRFAM7A-207ENST00000570098 PGBD1Q96JS3 809 aa2.54□□□□□ -2
CHRFAM7A-207ENST00000570098 TMEM87BQ96K49 555 aa2.54□□□□□ -2
CHRFAM7A-207ENST00000570098 SPATA33Q96N06 139 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms