RNA–Protein interactions for RNA: ENST00000569394.5

GTF3C1-210, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-210ENST00000569394 ITGB5P18084 799 aa10.3□□□□□ -0.76
GTF3C1-210ENST00000569394 MARK3P27448 753 aa10.3□□□□□ -0.76
GTF3C1-210ENST00000569394 CYP2C18P33260 490 aa10.3□□□□□ -0.76
GTF3C1-210ENST00000569394 CDK7P50613 346 aa10.3□□□□□ -0.76
GTF3C1-210ENST00000569394 CCL23P55773 120 aa10.3□□□□□ -0.76
GTF3C1-210ENST00000569394 ZNF200P98182 395 aaPredicted RBP10.3□□□□□ -0.76
GTF3C1-210ENST00000569394 MTMR1Q13613 665 aa10.3□□□□□ -0.76
GTF3C1-210ENST00000569394 DGKDQ16760 1214 aa10.3□□□□□ -0.76
GTF3C1-210ENST00000569394 TRIM50Q86XT4 487 aa10.3□□□□□ -0.76
GTF3C1-210ENST00000569394 FAM126BQ8IXS8 530 aa10.3□□□□□ -0.76
GTF3C1-210ENST00000569394 REXO1Q8N1G1 1221 aaKnown RBP10.3□□□□□ -0.76
GTF3C1-210ENST00000569394 GJA10Q969M2 543 aa10.3□□□□□ -0.76
GTF3C1-210ENST00000569394 KIF2CQ99661 725 aa10.3□□□□□ -0.76
GTF3C1-210ENST00000569394 MXRA8Q9BRK3 442 aa10.3□□□□□ -0.76
GTF3C1-210ENST00000569394 MAF1Q9H063 256 aa10.3□□□□□ -0.76
GTF3C1-210ENST00000569394 UPF2Q9HAU5 1272 aaKnown RBP10.3□□□□□ -0.76
GTF3C1-210ENST00000569394 ORC3Q9UBD5 711 aaPredicted RBP10.3□□□□□ -0.76
GTF3C1-210ENST00000569394 NOD1Q9Y239 953 aa10.3□□□□□ -0.76
GTF3C1-210ENST00000569394 FRMPD4Q14CM0 1322 aa10.3□□□□□ -0.76
GTF3C1-210ENST00000569394 CEP290O15078 2479 aa10.29□□□□□ -0.76
GTF3C1-210ENST00000569394 DNAH12Q6ZR08 3092 aa10.29□□□□□ -0.76
GTF3C1-210ENST00000569394 hCG_1984214I3L0E3 225 aa10.29□□□□□ -0.76
GTF3C1-210ENST00000569394 CABYRO75952 493 aa10.29□□□□□ -0.76
GTF3C1-210ENST00000569394 CDKL5O76039 1030 aa10.29□□□□□ -0.76
GTF3C1-210ENST00000569394 GNA11P29992 359 aa10.29□□□□□ -0.76
GTF3C1-210ENST00000569394 PSEN2P49810 448 aa10.29□□□□□ -0.76
GTF3C1-210ENST00000569394 ARHGAP4P98171 946 aa10.29□□□□□ -0.76
GTF3C1-210ENST00000569394 GUCY1B3Q02153 619 aa10.29□□□□□ -0.76
GTF3C1-210ENST00000569394 NEDD9Q14511 834 aa10.29□□□□□ -0.76
GTF3C1-210ENST00000569394 MFSD10Q14728 455 aa10.29□□□□□ -0.76
GTF3C1-210ENST00000569394 KIAA0753Q2KHM9 967 aa10.29□□□□□ -0.76
GTF3C1-210ENST00000569394 KCNV1Q6PIU1 500 aa10.29□□□□□ -0.76
GTF3C1-210ENST00000569394 PLA2G4DQ86XP0 818 aa10.29□□□□□ -0.76
GTF3C1-210ENST00000569394 ZNF713Q8N859 430 aaPredicted RBP10.29□□□□□ -0.76
GTF3C1-210ENST00000569394 C7orf31Q8N865 590 aa10.29□□□□□ -0.76
GTF3C1-210ENST00000569394 CCDC148Q8NFR7 591 aa10.29□□□□□ -0.76
GTF3C1-210ENST00000569394 KAT2BQ92831 832 aa10.29□□□□□ -0.76
GTF3C1-210ENST00000569394 GTF3C6Q969F1 213 aa10.29□□□□□ -0.76
GTF3C1-210ENST00000569394 SCLYQ96I15 445 aa10.29□□□□□ -0.76
GTF3C1-210ENST00000569394 INPP4AQ96PE3 977 aaPredicted RBP10.29□□□□□ -0.76
GTF3C1-210ENST00000569394 GDF15Q99988 308 aa10.29□□□□□ -0.76
GTF3C1-210ENST00000569394 MFRPQ9BY79 579 aa10.29□□□□□ -0.76
GTF3C1-210ENST00000569394 ZMYND12Q9H0C1 365 aa10.29□□□□□ -0.76
GTF3C1-210ENST00000569394 ALDH8A1Q9H2A2 487 aaPredicted RBP10.29□□□□□ -0.76
GTF3C1-210ENST00000569394 JADE2Q9NQC1 790 aa10.29□□□□□ -0.76
GTF3C1-210ENST00000569394 KCNH7Q9NS40 1196 aa10.29□□□□□ -0.76
GTF3C1-210ENST00000569394 HDAC6Q9UBN7 1215 aa10.29□□□□□ -0.76
GTF3C1-210ENST00000569394 PCDHA4Q9UN74 947 aa10.29□□□□□ -0.76
GTF3C1-210ENST00000569394 UBIAD1Q9Y5Z9 338 aa10.29□□□□□ -0.76
GTF3C1-210ENST00000569394 MROH7Q68CQ1 1323 aa10.29□□□□□ -0.76
GTF3C1-210ENST00000569394 FAM86B1E9PN63 330 aa10.28□□□□□ -0.76
GTF3C1-210ENST00000569394 STAM2O75886 525 aa10.28□□□□□ -0.76
GTF3C1-210ENST00000569394 FOSP01100 380 aaPredicted RBP10.28□□□□□ -0.76
GTF3C1-210ENST00000569394 LGALS2P05162 132 aa10.28□□□□□ -0.76
GTF3C1-210ENST00000569394 FAM86B2P0C5J1 330 aa10.28□□□□□ -0.76
GTF3C1-210ENST00000569394 FDPSP14324 419 aaKnown RBP10.28□□□□□ -0.76
GTF3C1-210ENST00000569394 ICAM3P32942 547 aa10.28□□□□□ -0.76
GTF3C1-210ENST00000569394 CLK2P49760 499 aaKnown RBP10.28□□□□□ -0.76
GTF3C1-210ENST00000569394 EPHB4P54760 987 aa10.28□□□□□ -0.76
GTF3C1-210ENST00000569394 NKX3-2P78367 333 aa10.28□□□□□ -0.76
GTF3C1-210ENST00000569394 ST3GAL1Q11201 340 aa10.28□□□□□ -0.76
GTF3C1-210ENST00000569394 AP3B2Q13367 1082 aa10.28□□□□□ -0.76
GTF3C1-210ENST00000569394 SHHQ15465 462 aa10.28□□□□□ -0.76
GTF3C1-210ENST00000569394 PTGISQ16647 500 aa10.28□□□□□ -0.76
GTF3C1-210ENST00000569394 PRR16Q569H4 304 aa10.28□□□□□ -0.76
GTF3C1-210ENST00000569394 C9orf50Q5SZB4 431 aa10.28□□□□□ -0.76
GTF3C1-210ENST00000569394 C1orf53Q5VUE5 145 aa10.28□□□□□ -0.76
GTF3C1-210ENST00000569394 GDF6Q6KF10 455 aaPredicted RBP10.28□□□□□ -0.76
GTF3C1-210ENST00000569394 ANKRD33Q7Z3H0 272 aa10.28□□□□□ -0.76
GTF3C1-210ENST00000569394 DEFB128Q7Z7B8 93 aa10.28□□□□□ -0.76
GTF3C1-210ENST00000569394 BLIDQ8IZY5 108 aa10.28□□□□□ -0.76
GTF3C1-210ENST00000569394 PPTC7Q8NI37 304 aa10.28□□□□□ -0.76
GTF3C1-210ENST00000569394 OXER1Q8TDS5 423 aa10.28□□□□□ -0.76
GTF3C1-210ENST00000569394 HIPK3Q9H422 1215 aa10.28□□□□□ -0.76
GTF3C1-210ENST00000569394 LIMCH1Q9UPQ0 1083 aa10.28□□□□□ -0.76
GTF3C1-210ENST00000569394 LTBP2Q14767 1821 aa10.28□□□□□ -0.76
GTF3C1-210ENST00000569394 FAM205CA6NFA0 338 aa10.27□□□□□ -0.77
GTF3C1-210ENST00000569394 KPNA6O60684 536 aa10.27□□□□□ -0.77
GTF3C1-210ENST00000569394 TIMP1P01033 207 aa10.27□□□□□ -0.77
GTF3C1-210ENST00000569394 TGFB3P10600 412 aa10.27□□□□□ -0.77
GTF3C1-210ENST00000569394 CSF2RAP15509 400 aa10.27□□□□□ -0.77
GTF3C1-210ENST00000569394 KCNA2P16389 499 aa10.27□□□□□ -0.77
GTF3C1-210ENST00000569394 TCF7P36402 384 aaPredicted RBP10.27□□□□□ -0.77
GTF3C1-210ENST00000569394 SREBF1P36956 1147 aa10.27□□□□□ -0.77
GTF3C1-210ENST00000569394 IGBP1P78318 339 aa10.27□□□□□ -0.77
GTF3C1-210ENST00000569394 INF2Q27J81 1249 aa10.27□□□□□ -0.77
GTF3C1-210ENST00000569394 CEP55Q53EZ4 464 aa10.27□□□□□ -0.77
GTF3C1-210ENST00000569394 METTL7BQ6UX53 244 aa10.27□□□□□ -0.77
GTF3C1-210ENST00000569394 NSUN7Q8NE18 718 aaKnown RBP10.27□□□□□ -0.77
GTF3C1-210ENST00000569394 BICD2Q8TD16 824 aa10.27□□□□□ -0.77
GTF3C1-210ENST00000569394 TBCKQ8TEA7 893 aa10.27□□□□□ -0.77
GTF3C1-210ENST00000569394 GLG1Q92896 1179 aa10.27□□□□□ -0.77
GTF3C1-210ENST00000569394 GPRASP2Q96D09 838 aa10.27□□□□□ -0.77
GTF3C1-210ENST00000569394 LRCH3Q96II8 777 aa10.27□□□□□ -0.77
GTF3C1-210ENST00000569394 TOX2Q96NM4 488 aa10.27□□□□□ -0.77
GTF3C1-210ENST00000569394 GPR20Q99678 358 aa10.27□□□□□ -0.77
GTF3C1-210ENST00000569394 SDF4Q9BRK5 362 aa10.27□□□□□ -0.77
GTF3C1-210ENST00000569394 GLT8D2Q9H1C3 349 aa10.27□□□□□ -0.77
GTF3C1-210ENST00000569394 AGO4Q9HCK5 861 aaKnown RBP10.27□□□□□ -0.77
GTF3C1-210ENST00000569394 TRIP12Q14669 1992 aaPredicted RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms