RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 FAM207AQ9NSI2 230 aaPredicted RBP7.67□□□□□ -1.18
CNOT1-216ENST00000569240 ABHD10Q9NUJ1 306 aa7.67□□□□□ -1.18
CNOT1-216ENST00000569240 BTBD7Q9P203 1132 aa7.67□□□□□ -1.18
CNOT1-216ENST00000569240 TRPC5Q9UL62 973 aaPredicted RBP7.67□□□□□ -1.18
CNOT1-216ENST00000569240 NFU1Q9UMS0 254 aa7.67□□□□□ -1.18
CNOT1-216ENST00000569240 PTCH1Q13635 1447 aa7.67□□□□□ -1.18
CNOT1-216ENST00000569240 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.67□□□□□ -1.18
CNOT1-216ENST00000569240 DCAF17Q5H9S7 520 aaPredicted RBP7.67□□□□□ -1.18
CNOT1-216ENST00000569240 C17orf50Q8WW18 174 aa7.67□□□□□ -1.18
CNOT1-216ENST00000569240 PPWD1Q96BP3 646 aaKnown RBP7.67□□□□□ -1.18
CNOT1-216ENST00000569240 DYDC2Q96IM9 177 aa7.67□□□□□ -1.18
CNOT1-216ENST00000569240 UBN1Q9NPG3 1134 aa7.67□□□□□ -1.18
CNOT1-216ENST00000569240 TEKT2Q9UIF3 430 aa7.67□□□□□ -1.18
CNOT1-216ENST00000569240 SRPRBQ9Y5M8 271 aaKnown RBP7.67□□□□□ -1.18
CNOT1-216ENST00000569240 ADCY9O60503 1353 aa7.67□□□□□ -1.18
CNOT1-216ENST00000569240 STK36Q9NRP7 1315 aa7.67□□□□□ -1.18
CNOT1-216ENST00000569240 SPDYE3A6NKU9 549 aa7.66□□□□□ -1.18
CNOT1-216ENST00000569240 FAM200BP0CF97 657 aa7.66□□□□□ -1.18
CNOT1-216ENST00000569240 PMS2P54278 862 aa7.66□□□□□ -1.18
CNOT1-216ENST00000569240 COPS2P61201 443 aa7.66□□□□□ -1.18
CNOT1-216ENST00000569240 R3HDM1Q15032 1099 aaKnown RBP7.66□□□□□ -1.18
CNOT1-216ENST00000569240 AKAP4Q5JQC9 854 aa7.66□□□□□ -1.18
CNOT1-216ENST00000569240 ZNF513Q8N8E2 541 aaPredicted RBP7.66□□□□□ -1.18
CNOT1-216ENST00000569240 TUBGCP3Q96CW5 907 aa7.66□□□□□ -1.18
CNOT1-216ENST00000569240 IL17RAQ96F46 866 aa7.66□□□□□ -1.18
CNOT1-216ENST00000569240 SSU72P8A0A1W2PR75 194 aa7.66□□□□□ -1.18
CNOT1-216ENST00000569240 SYF2O95926 243 aaKnown RBP7.66□□□□□ -1.18
CNOT1-216ENST00000569240 TSPY3P0CV98 308 aa7.66□□□□□ -1.18
CNOT1-216ENST00000569240 TSPY8P0CW00 308 aa7.66□□□□□ -1.18
CNOT1-216ENST00000569240 KRT10P13645 584 aa7.66□□□□□ -1.18
CNOT1-216ENST00000569240 MYL6BP14649 208 aa7.66□□□□□ -1.18
CNOT1-216ENST00000569240 VCAM1P19320 739 aa7.66□□□□□ -1.18
CNOT1-216ENST00000569240 MAGOHP61326 146 aaKnown RBP7.66□□□□□ -1.18
CNOT1-216ENST00000569240 ART3Q13508 389 aa7.66□□□□□ -1.18
CNOT1-216ENST00000569240 MLECQ14165 292 aa7.66□□□□□ -1.18
CNOT1-216ENST00000569240 COL23A1Q86Y22 540 aaPredicted RBP7.66□□□□□ -1.18
CNOT1-216ENST00000569240 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.66□□□□□ -1.186e-7■■□□□ 11.9
CNOT1-216ENST00000569240 LRRC2Q9BYS8 371 aa7.66□□□□□ -1.18
CNOT1-216ENST00000569240 MMADHCQ9H3L0 296 aaPredicted RBP7.66□□□□□ -1.18
CNOT1-216ENST00000569240 PDHA1P08559 390 aa7.66□□□□□ -1.18
CNOT1-216ENST00000569240 GAP43P17677 238 aa7.66□□□□□ -1.18
CNOT1-216ENST00000569240 Q4G0T1 1027 aa7.66□□□□□ -1.18
CNOT1-216ENST00000569240 CNOT6LQ96LI5 555 aaKnown RBP7.66□□□□□ -1.18
CNOT1-216ENST00000569240 RAD21L1Q9H4I0 556 aa7.66□□□□□ -1.18
CNOT1-216ENST00000569240 MRPL47Q9HD33 250 aaKnown RBP7.66□□□□□ -1.18
CNOT1-216ENST00000569240 SLC4A7Q9Y6M7 1214 aa7.66□□□□□ -1.18
CNOT1-216ENST00000569240 SYNMO15061 1565 aa7.66□□□□□ -1.18
CNOT1-216ENST00000569240 A8MXQ7 604 aa7.66□□□□□ -1.18
CNOT1-216ENST00000569240 KPNA4O00629 521 aaPredicted RBP7.66□□□□□ -1.18
CNOT1-216ENST00000569240 ASAP2O43150 1006 aa7.66□□□□□ -1.18
CNOT1-216ENST00000569240 CDH16O75309 829 aa7.66□□□□□ -1.18
CNOT1-216ENST00000569240 KLHL2O95198 593 aa7.66□□□□□ -1.18
CNOT1-216ENST00000569240 VSNL1P62760 191 aa7.66□□□□□ -1.18
CNOT1-216ENST00000569240 BFSP1Q12934 665 aa7.66□□□□□ -1.18
CNOT1-216ENST00000569240 ALCAMQ13740 583 aa7.66□□□□□ -1.18
CNOT1-216ENST00000569240 HIC1Q14526 733 aa7.66□□□□□ -1.18
CNOT1-216ENST00000569240 APBB2Q92870 758 aa7.66□□□□□ -1.18
CNOT1-216ENST00000569240 RANBP17Q9H2T7 1088 aaKnown RBP7.66□□□□□ -1.18
CNOT1-216ENST00000569240 PARP3Q9Y6F1 533 aa7.66□□□□□ -1.18
CNOT1-216ENST00000569240 KPNA7A9QM74 516 aa7.66□□□□□ -1.18
CNOT1-216ENST00000569240 PLTPP55058 493 aa7.66□□□□□ -1.18
CNOT1-216ENST00000569240 DCTN2Q13561 401 aaKnown RBP7.66□□□□□ -1.18
CNOT1-216ENST00000569240 ITGA9Q13797 1035 aa7.66□□□□□ -1.18
CNOT1-216ENST00000569240 TNNI3KQ59H18 835 aa7.66□□□□□ -1.18
CNOT1-216ENST00000569240 EP400NLQ6ZTU2 488 aa7.66□□□□□ -1.18
CNOT1-216ENST00000569240 SNX12Q9UMY4 172 aa7.66□□□□□ -1.18
CNOT1-216ENST00000569240 DNM3Q9UQ16 869 aa7.66□□□□□ -1.18
CNOT1-216ENST00000569240 SESN1Q9Y6P5 492 aa7.66□□□□□ -1.18
CNOT1-216ENST00000569240 FPGT-TNNI3KV9GXZ4 949 aa7.66□□□□□ -1.18
CNOT1-216ENST00000569240 GCC2Q8IWJ2 1684 aa7.66□□□□□ -1.18
CNOT1-216ENST00000569240 PRR23AA6NEV1 266 aa7.66□□□□□ -1.18
CNOT1-216ENST00000569240 E7EWF7 191 aa7.66□□□□□ -1.18
CNOT1-216ENST00000569240 NQO1P15559 274 aaKnown RBP7.66□□□□□ -1.18
CNOT1-216ENST00000569240 MMP14P50281 582 aa7.66□□□□□ -1.18
CNOT1-216ENST00000569240 ZNF174Q15697 407 aa7.66□□□□□ -1.18
CNOT1-216ENST00000569240 ZCWPW2Q504Y3 356 aa7.66□□□□□ -1.18
CNOT1-216ENST00000569240 TRMT44Q8IYL2 757 aaKnown RBP7.66□□□□□ -1.18
CNOT1-216ENST00000569240 TSPYL6Q8N831 410 aa7.66□□□□□ -1.18
CNOT1-216ENST00000569240 MB21D1Q8N884 522 aa7.66□□□□□ -1.18
CNOT1-216ENST00000569240 FAM167BQ9BTA0 163 aa7.66□□□□□ -1.18
CNOT1-216ENST00000569240 CEP72Q9P209 647 aa7.66□□□□□ -1.18
CNOT1-216ENST00000569240 MAN1B1Q9UKM7 699 aa7.66□□□□□ -1.18
CNOT1-216ENST00000569240 EXOC3O60645 756 aa7.65□□□□□ -1.18
CNOT1-216ENST00000569240 C2orf54Q08AI8 447 aa7.65□□□□□ -1.18
CNOT1-216ENST00000569240 PPP2R5CQ13362 524 aa7.65□□□□□ -1.18
CNOT1-216ENST00000569240 TSC22D1Q15714 1073 aa7.65□□□□□ -1.18
CNOT1-216ENST00000569240 TSHZ3Q63HK5 1081 aa7.65□□□□□ -1.18
CNOT1-216ENST00000569240 DCUN1D2Q6PH85 259 aa7.65□□□□□ -1.18
CNOT1-216ENST00000569240 PDIK1LQ8N165 341 aa7.65□□□□□ -1.18
CNOT1-216ENST00000569240 RNF169Q8NCN4 708 aa7.65□□□□□ -1.18
CNOT1-216ENST00000569240 NSUN7Q8NE18 718 aaKnown RBP7.65□□□□□ -1.18
CNOT1-216ENST00000569240 ZCCHC17Q9NP64 241 aaKnown RBP7.65□□□□□ -1.18
CNOT1-216ENST00000569240 C21orf2O43822 256 aa7.65□□□□□ -1.18
CNOT1-216ENST00000569240 PKP1Q13835 747 aa7.65□□□□□ -1.18
CNOT1-216ENST00000569240 TCP11X2Q5H9J9 407 aa7.65□□□□□ -1.18
CNOT1-216ENST00000569240 E4F1Q66K89 784 aaPredicted RBP7.65□□□□□ -1.18
CNOT1-216ENST00000569240 FAM173BQ6P4H8 233 aa7.65□□□□□ -1.18
CNOT1-216ENST00000569240 CAVIN3Q969G5 261 aa7.65□□□□□ -1.18
CNOT1-216ENST00000569240 KIFC2Q96AC6 838 aa7.65□□□□□ -1.18
CNOT1-216ENST00000569240 MTBPQ96DY7 904 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms