RNA–Protein interactions for RNA: ENST00000569136.5

CAPN3-219, Transcript of calpain 3, humanhuman

TSL 2 BASIC

Gene CAPN3, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-219ENST00000569136 MEN1O00255 615 aa10.65□□□□□ -0.7
CAPN3-219ENST00000569136 SH2B2O14492 632 aaPredicted RBP10.65□□□□□ -0.7
CAPN3-219ENST00000569136 ZBTB5O15062 677 aa10.65□□□□□ -0.7
CAPN3-219ENST00000569136 HSPA4P34932 840 aa10.65□□□□□ -0.7
CAPN3-219ENST00000569136 ANTXR2P58335 489 aa10.65□□□□□ -0.7
CAPN3-219ENST00000569136 BAATQ14032 418 aaPredicted RBP10.65□□□□□ -0.7
CAPN3-219ENST00000569136 PPP2R5BQ15173 497 aa10.65□□□□□ -0.7
CAPN3-219ENST00000569136 CDC37Q16543 378 aaPredicted RBP10.65□□□□□ -0.7
CAPN3-219ENST00000569136 PRAMEF19Q5SWL8 479 aa10.65□□□□□ -0.7
CAPN3-219ENST00000569136 NSMFQ6X4W1 530 aa10.65□□□□□ -0.7
CAPN3-219ENST00000569136 RNF207Q6ZRF8 634 aa10.65□□□□□ -0.7
CAPN3-219ENST00000569136 FBXO11Q86XK2 927 aa10.65□□□□□ -0.7
CAPN3-219ENST00000569136 TRIM50Q86XT4 487 aa10.65□□□□□ -0.7
CAPN3-219ENST00000569136 STAG2Q8N3U4 1231 aa10.65□□□□□ -0.7
CAPN3-219ENST00000569136 CTCFLQ8NI51 663 aaPredicted RBP10.65□□□□□ -0.7
CAPN3-219ENST00000569136 SHISA4Q96DD7 197 aa10.65□□□□□ -0.7
CAPN3-219ENST00000569136 MTMR8Q96EF0 704 aa10.65□□□□□ -0.7
CAPN3-219ENST00000569136 AMNQ9BXJ7 453 aa10.65□□□□□ -0.7
CAPN3-219ENST00000569136 RIOX1Q9H6W3 641 aa10.65□□□□□ -0.7
CAPN3-219ENST00000569136 RAB6BQ9NRW1 208 aa10.65□□□□□ -0.7
CAPN3-219ENST00000569136 NR2E3Q9Y5X4 410 aa10.65□□□□□ -0.7
CAPN3-219ENST00000569136 DOCK3Q8IZD9 2030 aa10.65□□□□□ -0.71
CAPN3-219ENST00000569136 CENPFP49454 3210 aa10.65□□□□□ -0.71
CAPN3-219ENST00000569136 PNMA6FA0A0J9YX94 578 aa10.64□□□□□ -0.71
CAPN3-219ENST00000569136 PTPDC1A2A3K4 754 aa10.64□□□□□ -0.71
CAPN3-219ENST00000569136 SNAI1O95863 264 aaPredicted RBP10.64□□□□□ -0.71
CAPN3-219ENST00000569136 ZNF865P0CJ78 1059 aaPredicted RBP10.64□□□□□ -0.71
CAPN3-219ENST00000569136 RARBP10826 455 aa10.64□□□□□ -0.71
CAPN3-219ENST00000569136 AKR1A1P14550 325 aa10.64□□□□□ -0.71
CAPN3-219ENST00000569136 PTGIRP43119 386 aa10.64□□□□□ -0.71
CAPN3-219ENST00000569136 CNTN2Q02246 1040 aa10.64□□□□□ -0.71
CAPN3-219ENST00000569136 ACVR2BQ13705 512 aa10.64□□□□□ -0.71
CAPN3-219ENST00000569136 MUM1L1Q5H9M0 696 aa10.64□□□□□ -0.71
CAPN3-219ENST00000569136 RASGRP2Q7LDG7 609 aa10.64□□□□□ -0.71
CAPN3-219ENST00000569136 TRIM46Q7Z4K8 759 aa10.64□□□□□ -0.71
CAPN3-219ENST00000569136 ZNF654Q8IZM8 581 aa10.64□□□□□ -0.71
CAPN3-219ENST00000569136 FBXL16Q8N461 479 aa10.64□□□□□ -0.71
CAPN3-219ENST00000569136 FANCBQ8NB91 859 aa10.64□□□□□ -0.71
CAPN3-219ENST00000569136 TRPV1Q8NER1 839 aa10.64□□□□□ -0.71
CAPN3-219ENST00000569136 DNERQ8NFT8 737 aa10.64□□□□□ -0.71
CAPN3-219ENST00000569136 MORC4Q8TE76 937 aa10.64□□□□□ -0.71
CAPN3-219ENST00000569136 NUP133Q8WUM0 1156 aa10.64□□□□□ -0.71
CAPN3-219ENST00000569136 CLEC4DQ8WXI8 215 aa10.64□□□□□ -0.71
CAPN3-219ENST00000569136 DPF3Q92784 378 aa10.64□□□□□ -0.71
CAPN3-219ENST00000569136 PAWRQ96IZ0 340 aaKnown RBP10.64□□□□□ -0.71
CAPN3-219ENST00000569136 USP26Q9BXU7 913 aa10.64□□□□□ -0.71
CAPN3-219ENST00000569136 VRTNQ9H8Y1 702 aa10.64□□□□□ -0.71
CAPN3-219ENST00000569136 PDE4DIPQ5VU43 2346 aa10.64□□□□□ -0.71
CAPN3-219ENST00000569136 RCAN1P53805 252 aa10.63□□□□□ -0.71
CAPN3-219ENST00000569136 RPS6P62753 249 aaKnown RBP10.63□□□□□ -0.71
CAPN3-219ENST00000569136 FGD1P98174 961 aa10.63□□□□□ -0.71
CAPN3-219ENST00000569136 QRICH1Q2TAL8 776 aa10.63□□□□□ -0.71
CAPN3-219ENST00000569136 IQSEC1Q6DN90 963 aa10.63□□□□□ -0.71
CAPN3-219ENST00000569136 ARMCX2Q7L311 632 aa10.63□□□□□ -0.71
CAPN3-219ENST00000569136 RNF180Q86T96 592 aa10.63□□□□□ -0.71
CAPN3-219ENST00000569136 CCDC144CPQ8IYA2 1237 aa10.63□□□□□ -0.71
CAPN3-219ENST00000569136 RRP36Q96EU6 259 aaKnown RBP10.63□□□□□ -0.71
CAPN3-219ENST00000569136 ZFP42Q96MM3 310 aa10.63□□□□□ -0.71
CAPN3-219ENST00000569136 IWS1Q96ST2 819 aa10.63□□□□□ -0.71
CAPN3-219ENST00000569136 SPZ1Q9BXG8 430 aa10.63□□□□□ -0.71
CAPN3-219ENST00000569136 CPVLQ9H3G5 476 aa10.63□□□□□ -0.71
CAPN3-219ENST00000569136 SPC25Q9HBM1 224 aa10.63□□□□□ -0.71
CAPN3-219ENST00000569136 SENP2Q9HC62 589 aa10.63□□□□□ -0.71
CAPN3-219ENST00000569136 POLMQ9NP87 494 aaPredicted RBP10.63□□□□□ -0.71
CAPN3-219ENST00000569136 PCDHA1Q9Y5I3 950 aa10.63□□□□□ -0.71
CAPN3-219ENST00000569136 GREB1LQ9C091 1923 aaPredicted RBP10.62□□□□□ -0.71
CAPN3-219ENST00000569136 CCDC196A0A1B0GTZ2 297 aa10.62□□□□□ -0.71
CAPN3-219ENST00000569136 DNM1LO00429 736 aa10.62□□□□□ -0.71
CAPN3-219ENST00000569136 NFIBO00712 420 aa10.62□□□□□ -0.71
CAPN3-219ENST00000569136 DUSP11O75319 330 aaKnown RBP10.62□□□□□ -0.71
CAPN3-219ENST00000569136 STAU1O95793 577 aaKnown RBP10.62□□□□□ -0.71
CAPN3-219ENST00000569136 CALML3P27482 149 aa10.62□□□□□ -0.71
CAPN3-219ENST00000569136 ATP1A2P50993 1020 aa10.62□□□□□ -0.71
CAPN3-219ENST00000569136 USH1GQ495M9 461 aa10.62□□□□□ -0.71
CAPN3-219ENST00000569136 BLOC1S2Q6QNY1 142 aa10.62□□□□□ -0.71
CAPN3-219ENST00000569136 TEX2Q8IWB9 1127 aa10.62□□□□□ -0.71
CAPN3-219ENST00000569136 NSUN6Q8TEA1 469 aaKnown RBP10.62□□□□□ -0.71
CAPN3-219ENST00000569136 C11orf49Q9H6J7 331 aa10.62□□□□□ -0.71
CAPN3-219ENST00000569136 VTA1Q9NP79 307 aa10.62□□□□□ -0.71
CAPN3-219ENST00000569136 RBM28Q9NW13 759 aaKnown RBP10.62□□□□□ -0.71
CAPN3-219ENST00000569136 ZHX1Q9UKY1 873 aaPredicted RBP10.62□□□□□ -0.71
CAPN3-219ENST00000569136 Q9Y3F1 56 aa10.62□□□□□ -0.71
CAPN3-219ENST00000569136 RBM19Q9Y4C8 960 aaKnown RBP10.62□□□□□ -0.71
CAPN3-219ENST00000569136 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.61□□□□□ -0.71
CAPN3-219ENST00000569136 A0A1W2PRU2 124 aa10.61□□□□□ -0.71
CAPN3-219ENST00000569136 KBTBD13C9JR72 458 aa10.61□□□□□ -0.71
CAPN3-219ENST00000569136 LCE2BO14633 110 aa10.61□□□□□ -0.71
CAPN3-219ENST00000569136 COL6A1P12109 1028 aa10.61□□□□□ -0.71
CAPN3-219ENST00000569136 TAL1P17542 331 aaPredicted RBP10.61□□□□□ -0.71
CAPN3-219ENST00000569136 ADCK5Q3MIX3 580 aa10.61□□□□□ -0.71
CAPN3-219ENST00000569136 CCDC144BQ3MJ40 725 aa10.61□□□□□ -0.71
CAPN3-219ENST00000569136 FGD4Q96M96 766 aa10.61□□□□□ -0.71
CAPN3-219ENST00000569136 JAKMIP1Q96N16 626 aaKnown RBP10.61□□□□□ -0.71
CAPN3-219ENST00000569136 PIGSQ96S52 555 aa10.61□□□□□ -0.71
CAPN3-219ENST00000569136 INSM2Q96T92 566 aaPredicted RBP10.61□□□□□ -0.71
CAPN3-219ENST00000569136 TM6SF1Q9BZW5 370 aa10.61□□□□□ -0.71
CAPN3-219ENST00000569136 XPNPEP3Q9NQH7 507 aa10.61□□□□□ -0.71
CAPN3-219ENST00000569136 DNAAF2Q9NVR5 837 aaKnown RBP10.61□□□□□ -0.71
CAPN3-219ENST00000569136 SEC63Q9UGP8 760 aaKnown RBP10.61□□□□□ -0.71
CAPN3-219ENST00000569136 SNX14Q9Y5W7 946 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms