RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 BRF1Q92994 677 aa8.99□□□□□ -0.97
CDH3-209ENST00000569080 GPRASP2Q96D09 838 aa8.99□□□□□ -0.97
CDH3-209ENST00000569080 CDX2Q99626 313 aaPredicted RBP8.99□□□□□ -0.97
CDH3-209ENST00000569080 GPR20Q99678 358 aa8.99□□□□□ -0.97
CDH3-209ENST00000569080 BARHL2Q9NY43 387 aa8.99□□□□□ -0.97
CDH3-209ENST00000569080 RTEL1Q9NZ71 1219 aa8.99□□□□□ -0.97
CDH3-209ENST00000569080 YBX2Q9Y2T7 364 aaKnown RBP8.99□□□□□ -0.97
CDH3-209ENST00000569080 UBIAD1Q9Y5Z9 338 aa8.99□□□□□ -0.97
CDH3-209ENST00000569080 hCG_1984214I3L0E3 225 aa8.98□□□□□ -0.97
CDH3-209ENST00000569080 ADAMTS3O15072 1205 aa8.98□□□□□ -0.97
CDH3-209ENST00000569080 NBNO60934 754 aa8.98□□□□□ -0.97
CDH3-209ENST00000569080 FGBP02675 491 aa8.98□□□□□ -0.97
CDH3-209ENST00000569080 CXCL10P02778 98 aa8.98□□□□□ -0.97
CDH3-209ENST00000569080 CKBP12277 381 aa8.98□□□□□ -0.97
CDH3-209ENST00000569080 ADD1P35611 737 aaKnown RBP8.98□□□□□ -0.97
CDH3-209ENST00000569080 METAP2P50579 478 aaKnown RBP eCLIP8.98□□□□□ -0.97
CDH3-209ENST00000569080 NAPAP54920 295 aa8.98□□□□□ -0.97
CDH3-209ENST00000569080 CHMP4BP1P59074 171 aa8.98□□□□□ -0.97
CDH3-209ENST00000569080 ZNF200P98182 395 aaPredicted RBP8.98□□□□□ -0.97
CDH3-209ENST00000569080 MKRN4PQ13434 485 aaPredicted RBP8.98□□□□□ -0.97
CDH3-209ENST00000569080 BFSP2Q13515 415 aa8.98□□□□□ -0.97
CDH3-209ENST00000569080 TOB2Q14106 344 aaPredicted RBP8.98□□□□□ -0.97
CDH3-209ENST00000569080 NEDD9Q14511 834 aa8.98□□□□□ -0.97
CDH3-209ENST00000569080 MBTPS1Q14703 1052 aa8.98□□□□□ -0.97
CDH3-209ENST00000569080 GRIN2CQ14957 1233 aa8.98□□□□□ -0.97
CDH3-209ENST00000569080 PKN1Q16512 942 aa8.98□□□□□ -0.97
CDH3-209ENST00000569080 PFKFB3Q16875 520 aaPredicted RBP8.98□□□□□ -0.97
CDH3-209ENST00000569080 TCTN1Q2MV58 587 aa8.98□□□□□ -0.97
CDH3-209ENST00000569080 SYNE3Q6ZMZ3 975 aa8.98□□□□□ -0.97
CDH3-209ENST00000569080 LRRC8DQ7L1W4 858 aa8.98□□□□□ -0.97
CDH3-209ENST00000569080 CYFIP1Q7L576 1253 aa8.98□□□□□ -0.97
CDH3-209ENST00000569080 SERINC5Q86VE9 423 aa8.98□□□□□ -0.97
CDH3-209ENST00000569080 ZNF713Q8N859 430 aaPredicted RBP8.98□□□□□ -0.97
CDH3-209ENST00000569080 C7orf31Q8N865 590 aa8.98□□□□□ -0.97
CDH3-209ENST00000569080 CRYGNQ8WXF5 182 aa8.98□□□□□ -0.97
CDH3-209ENST00000569080 MYLIPQ8WY64 445 aa8.98□□□□□ -0.97
CDH3-209ENST00000569080 TIFAQ96CG3 184 aa8.98□□□□□ -0.97
CDH3-209ENST00000569080 PGBD1Q96JS3 809 aa8.98□□□□□ -0.97
CDH3-209ENST00000569080 ALG1Q9BT22 464 aa8.98□□□□□ -0.97
CDH3-209ENST00000569080 USP26Q9BXU7 913 aa8.98□□□□□ -0.97
CDH3-209ENST00000569080 MLXIPQ9HAP2 919 aa8.98□□□□□ -0.97
CDH3-209ENST00000569080 RIC8AQ9NPQ8 531 aa8.98□□□□□ -0.97
CDH3-209ENST00000569080 PCDHA6Q9UN73 950 aa8.98□□□□□ -0.97
CDH3-209ENST00000569080 PCDHA8Q9Y5H6 950 aa8.98□□□□□ -0.97
CDH3-209ENST00000569080 V9GY48 417 aaPredicted RBP8.98□□□□□ -0.97
CDH3-209ENST00000569080 COL4A4P53420 1690 aaPredicted RBP8.97□□□□□ -0.97
CDH3-209ENST00000569080 MICAL3Q7RTP6 2002 aa8.97□□□□□ -0.97
CDH3-209ENST00000569080 ESYT2A0FGR8 921 aa8.97□□□□□ -0.97
CDH3-209ENST00000569080 SPDYE3A6NKU9 549 aa8.97□□□□□ -0.97
CDH3-209ENST00000569080 H3BRB1 525 aa8.97□□□□□ -0.97
CDH3-209ENST00000569080 NEFLP07196 543 aa8.97□□□□□ -0.97
CDH3-209ENST00000569080 SMIM10L2AP0DMW4 78 aa8.97□□□□□ -0.97
CDH3-209ENST00000569080 SMIM10L2BP0DMW5 78 aa8.97□□□□□ -0.97
CDH3-209ENST00000569080 SCG2P13521 617 aa8.97□□□□□ -0.97
CDH3-209ENST00000569080 SELPP16109 830 aa8.97□□□□□ -0.97
CDH3-209ENST00000569080 SREBF1P36956 1147 aa8.97□□□□□ -0.97
CDH3-209ENST00000569080 ADAM17P78536 824 aa8.97□□□□□ -0.97
CDH3-209ENST00000569080 PTK7Q13308 1070 aa8.97□□□□□ -0.97
CDH3-209ENST00000569080 MTMR1Q13613 665 aa8.97□□□□□ -0.97
CDH3-209ENST00000569080 DEFB128Q7Z7B8 93 aa8.97□□□□□ -0.97
CDH3-209ENST00000569080 RPUSD2Q8IZ73 545 aaKnown RBP8.97□□□□□ -0.97
CDH3-209ENST00000569080 CYP2W1Q8TAV3 490 aa8.97□□□□□ -0.97
CDH3-209ENST00000569080 ANO3Q9BYT9 981 aa8.97□□□□□ -0.97
CDH3-209ENST00000569080 MTIF3Q9H2K0 278 aaKnown RBP8.97□□□□□ -0.97
CDH3-209ENST00000569080 ZNF576Q9H609 170 aa8.97□□□□□ -0.97
CDH3-209ENST00000569080 TUT1Q9H6E5 874 aaKnown RBP8.97□□□□□ -0.97
CDH3-209ENST00000569080 ZSWIM6Q9HCJ5 1215 aa8.97□□□□□ -0.97
CDH3-209ENST00000569080 JADE2Q9NQC1 790 aa8.97□□□□□ -0.97
CDH3-209ENST00000569080 PPP4R2Q9NY27 417 aa8.97□□□□□ -0.97
CDH3-209ENST00000569080 NOD1Q9Y239 953 aa8.97□□□□□ -0.97
CDH3-209ENST00000569080 CUL9Q8IWT3 2517 aa8.96□□□□□ -0.97
CDH3-209ENST00000569080 GSTTP1A0A1W2PQM5 241 aa8.96□□□□□ -0.98
CDH3-209ENST00000569080 NOP56O00567 594 aaKnown RBP8.96□□□□□ -0.98
CDH3-209ENST00000569080 ARHGEF15O94989 841 aa8.96□□□□□ -0.98
CDH3-209ENST00000569080 PDIA3P30101 505 aaKnown RBP8.96□□□□□ -0.98
CDH3-209ENST00000569080 ADCY7P51828 1080 aa8.96□□□□□ -0.98
CDH3-209ENST00000569080 RABGGTBP53611 331 aa8.96□□□□□ -0.98
CDH3-209ENST00000569080 ITGB3BPQ13352 177 aaPredicted RBP8.96□□□□□ -0.98
CDH3-209ENST00000569080 AP3B2Q13367 1082 aa8.96□□□□□ -0.98
CDH3-209ENST00000569080 RAB30Q15771 203 aa8.96□□□□□ -0.98
CDH3-209ENST00000569080 ZNF618Q5T7W0 954 aa8.96□□□□□ -0.98
CDH3-209ENST00000569080 ERICH6BQ5W0A0 696 aa8.96□□□□□ -0.98
CDH3-209ENST00000569080 RUFY3Q7L099 469 aa8.96□□□□□ -0.98
CDH3-209ENST00000569080 NLRX1Q86UT6 975 aa8.96□□□□□ -0.98
CDH3-209ENST00000569080 CCDC155Q8N6L0 562 aa8.96□□□□□ -0.98
CDH3-209ENST00000569080 PHKBQ93100 1093 aa8.96□□□□□ -0.98
CDH3-209ENST00000569080 CDHR1Q96JP9 859 aa8.96□□□□□ -0.98
CDH3-209ENST00000569080 PCYT2Q99447 389 aa8.96□□□□□ -0.98
CDH3-209ENST00000569080 ZMYND12Q9H0C1 365 aa8.96□□□□□ -0.98
CDH3-209ENST00000569080 TMEM260Q9NX78 707 aa8.96□□□□□ -0.98
CDH3-209ENST00000569080 SLC4A7Q9Y6M7 1214 aa8.96□□□□□ -0.98
CDH3-209ENST00000569080 EMSYQ7Z589 1322 aa8.96□□□□□ -0.98
CDH3-209ENST00000569080 COL4A6Q14031 1691 aa8.95□□□□□ -0.98
CDH3-209ENST00000569080 IGLV3-22A0A075B6J6 115 aa8.95□□□□□ -0.98
CDH3-209ENST00000569080 CCDC196A0A1B0GTZ2 297 aa8.95□□□□□ -0.98
CDH3-209ENST00000569080 C17orf102A2RUQ5 167 aa8.95□□□□□ -0.98
CDH3-209ENST00000569080 SMCO2A6NFE2 343 aa8.95□□□□□ -0.98
CDH3-209ENST00000569080 TREHO43280 583 aa8.95□□□□□ -0.98
CDH3-209ENST00000569080 PRPF3O43395 683 aaKnown RBP8.95□□□□□ -0.98
CDH3-209ENST00000569080 EDIL3O43854 480 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms