RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 C6orf222P0C671 652 aaPredicted RBP18.96■□□□□ 0.63
COMMD4-224ENST00000568877 CAPN2P17655 700 aa18.96■□□□□ 0.63
COMMD4-224ENST00000568877 DDIT3P35638 169 aa18.96■□□□□ 0.63
COMMD4-224ENST00000568877 NBR1Q14596 966 aa18.96■□□□□ 0.63
COMMD4-224ENST00000568877 FOXD4L5Q5VV16 416 aaPredicted RBP18.96■□□□□ 0.63
COMMD4-224ENST00000568877 RNF180Q86T96 592 aa18.96■□□□□ 0.63
COMMD4-224ENST00000568877 POTEDQ86YR6 584 aa18.96■□□□□ 0.63
COMMD4-224ENST00000568877 ARRDC4Q8NCT1 418 aa18.96■□□□□ 0.63
COMMD4-224ENST00000568877 ETNPPLQ8TBG4 499 aa18.96■□□□□ 0.63
COMMD4-224ENST00000568877 FOXD4L4Q8WXT5 416 aaPredicted RBP18.96■□□□□ 0.63
COMMD4-224ENST00000568877 SLC5A5Q92911 643 aa18.96■□□□□ 0.63
COMMD4-224ENST00000568877 SDF4Q9BRK5 362 aa18.96■□□□□ 0.63
COMMD4-224ENST00000568877 KCNMB3Q9NPA1 279 aa18.96■□□□□ 0.63
COMMD4-224ENST00000568877 TBC1D22BQ9NU19 505 aa18.96■□□□□ 0.63
COMMD4-224ENST00000568877 PCDHB6Q9Y5E3 794 aa18.96■□□□□ 0.63
COMMD4-224ENST00000568877 TBX3O15119 743 aa18.95■□□□□ 0.62
COMMD4-224ENST00000568877 CTAGE5O15320 804 aa18.95■□□□□ 0.62
COMMD4-224ENST00000568877 DHX15O43143 795 aaKnown RBP18.95■□□□□ 0.62
COMMD4-224ENST00000568877 F13A1P00488 732 aa18.95■□□□□ 0.62
COMMD4-224ENST00000568877 MYCNP04198 464 aaPredicted RBP18.95■□□□□ 0.62
COMMD4-224ENST00000568877 CPT1AP50416 773 aa18.95■□□□□ 0.62
COMMD4-224ENST00000568877 IRX5P78411 483 aaPredicted RBP18.95■□□□□ 0.62
COMMD4-224ENST00000568877 LRRC41Q15345 812 aa18.95■□□□□ 0.62
COMMD4-224ENST00000568877 FSCN1Q16658 493 aaKnown RBP18.95■□□□□ 0.62
COMMD4-224ENST00000568877 KLHDC9Q8NEP7 349 aa18.95■□□□□ 0.62
COMMD4-224ENST00000568877 AFG1LQ8WV93 481 aa18.95■□□□□ 0.62
COMMD4-224ENST00000568877 FAM20AQ96MK3 541 aa18.95■□□□□ 0.62
COMMD4-224ENST00000568877 SPATA33Q96N06 139 aa18.95■□□□□ 0.62
COMMD4-224ENST00000568877 RIT2Q99578 217 aa18.95■□□□□ 0.62
COMMD4-224ENST00000568877 MYADML2A6NDP7 307 aa18.94■□□□□ 0.62
COMMD4-224ENST00000568877 A6NJR5 290 aa18.94■□□□□ 0.62
COMMD4-224ENST00000568877 CCDC85CA6NKD9 419 aa18.94■□□□□ 0.62
COMMD4-224ENST00000568877 MARCH6O60337 910 aa18.94■□□□□ 0.62
COMMD4-224ENST00000568877 BAG4O95429 457 aaKnown RBP18.94■□□□□ 0.62
COMMD4-224ENST00000568877 CST5P28325 142 aaPredicted RBP18.94■□□□□ 0.62
COMMD4-224ENST00000568877 BEX3Q00994 111 aa18.94■□□□□ 0.62
COMMD4-224ENST00000568877 CALCRLQ16602 461 aa18.94■□□□□ 0.62
COMMD4-224ENST00000568877 HSDL1Q3SXM5 330 aa18.94■□□□□ 0.62
COMMD4-224ENST00000568877 BRDTQ58F21 947 aaPredicted RBP18.94■□□□□ 0.62
COMMD4-224ENST00000568877 GNASQ5JWF2 1037 aa18.94■□□□□ 0.62
COMMD4-224ENST00000568877 FAM173BQ6P4H8 233 aa18.94■□□□□ 0.62
COMMD4-224ENST00000568877 PPTC7Q8NI37 304 aa18.94■□□□□ 0.62
COMMD4-224ENST00000568877 HAS1Q92839 578 aa18.94■□□□□ 0.62
COMMD4-224ENST00000568877 GJA10Q969M2 543 aa18.94■□□□□ 0.62
COMMD4-224ENST00000568877 IPO9Q96P70 1041 aaKnown RBP18.94■□□□□ 0.62
COMMD4-224ENST00000568877 TMEM60Q9H2L4 133 aa18.94■□□□□ 0.62
COMMD4-224ENST00000568877 JPH1Q9HDC5 661 aaPredicted RBP18.94■□□□□ 0.62
COMMD4-224ENST00000568877 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.94■□□□□ 0.62
COMMD4-224ENST00000568877 SLC9A2Q9UBY0 812 aa18.94■□□□□ 0.62
COMMD4-224ENST00000568877 ZDHHC9Q9Y397 364 aa18.94■□□□□ 0.62
COMMD4-224ENST00000568877 DDX39AO00148 427 aaKnown RBP18.93■□□□□ 0.62
COMMD4-224ENST00000568877 NOP56O00567 594 aaKnown RBP18.93■□□□□ 0.62
COMMD4-224ENST00000568877 GAS7O60861 476 aa18.93■□□□□ 0.62
COMMD4-224ENST00000568877 PSMD10O75832 226 aa18.93■□□□□ 0.62
COMMD4-224ENST00000568877 MMP3P08254 477 aa18.93■□□□□ 0.62
COMMD4-224ENST00000568877 SP4Q02446 784 aa18.93■□□□□ 0.62
COMMD4-224ENST00000568877 LRCH2Q5VUJ6 765 aa18.93■□□□□ 0.62
COMMD4-224ENST00000568877 SLFN12Q8IYM2 578 aa18.93■□□□□ 0.62
COMMD4-224ENST00000568877 MTMR9Q96QG7 549 aa18.93■□□□□ 0.62
COMMD4-224ENST00000568877 TEKT3Q9BXF9 490 aa18.93■□□□□ 0.62
COMMD4-224ENST00000568877 BRCA2P51587 3418 aa18.92■□□□□ 0.62
COMMD4-224ENST00000568877 DNM1LO00429 736 aa18.92■□□□□ 0.62
COMMD4-224ENST00000568877 ZEB2O60315 1214 aa18.92■□□□□ 0.62
COMMD4-224ENST00000568877 NUCB2P80303 420 aa18.92■□□□□ 0.62
COMMD4-224ENST00000568877 KCNA10Q16322 511 aa18.92■□□□□ 0.62
COMMD4-224ENST00000568877 CCSAPQ6IQ19 270 aaPredicted RBP18.92■□□□□ 0.62
COMMD4-224ENST00000568877 C4orf32Q8N8J7 132 aa18.92■□□□□ 0.62
COMMD4-224ENST00000568877 ANKLE1Q8NAG6 615 aa18.92■□□□□ 0.62
COMMD4-224ENST00000568877 PCSK9Q8NBP7 692 aaKnown RBP18.92■□□□□ 0.62
COMMD4-224ENST00000568877 GPR20Q99678 358 aa18.92■□□□□ 0.62
COMMD4-224ENST00000568877 TSEN34Q9BSV6 310 aaKnown RBP18.92■□□□□ 0.62
COMMD4-224ENST00000568877 TCEAL9Q9UHQ7 104 aa18.92■□□□□ 0.62
COMMD4-224ENST00000568877 TELO2Q9Y4R8 837 aa18.92■□□□□ 0.62
COMMD4-224ENST00000568877 KBTBD13C9JR72 458 aa18.91■□□□□ 0.62
COMMD4-224ENST00000568877 PPFIA4O75335 1185 aa18.91■□□□□ 0.62
COMMD4-224ENST00000568877 CCNE2O96020 404 aa18.91■□□□□ 0.62
COMMD4-224ENST00000568877 OR52Z1P0C646 297 aa18.91■□□□□ 0.62
COMMD4-224ENST00000568877 EN2P19622 333 aaPredicted RBP18.91■□□□□ 0.62
COMMD4-224ENST00000568877 KRT76Q01546 638 aa18.91■□□□□ 0.62
COMMD4-224ENST00000568877 PTGDRQ13258 359 aa18.91■□□□□ 0.62
COMMD4-224ENST00000568877 DGKDQ16760 1214 aa18.91■□□□□ 0.62
COMMD4-224ENST00000568877 ZNF746Q6NUN9 644 aaPredicted RBP18.91■□□□□ 0.62
COMMD4-224ENST00000568877 SEPT1Q8WYJ6 367 aa18.91■□□□□ 0.62
COMMD4-224ENST00000568877 FRMPD3Q5JV73 1810 aa18.9■□□□□ 0.62
COMMD4-224ENST00000568877 GSTTP1A0A1W2PQM5 241 aa18.9■□□□□ 0.62
COMMD4-224ENST00000568877 MOXD2PA6NHM9 499 aa18.9■□□□□ 0.62
COMMD4-224ENST00000568877 LAD1O00515 517 aa18.9■□□□□ 0.62
COMMD4-224ENST00000568877 KPNA6O60684 536 aa18.9■□□□□ 0.62
COMMD4-224ENST00000568877 ASGR1P07306 291 aa18.9■□□□□ 0.62
COMMD4-224ENST00000568877 HOXD8P13378 290 aaPredicted RBP18.9■□□□□ 0.62
COMMD4-224ENST00000568877 TXKP42681 527 aa18.9■□□□□ 0.62
COMMD4-224ENST00000568877 MNX1P50219 401 aaPredicted RBP18.9■□□□□ 0.62
COMMD4-224ENST00000568877 ACTR2P61160 394 aa18.9■□□□□ 0.62
COMMD4-224ENST00000568877 B3GNT9Q6UX72 402 aa18.9■□□□□ 0.62
COMMD4-224ENST00000568877 POLR3EQ9NVU0 708 aa18.9■□□□□ 0.62
COMMD4-224ENST00000568877 VAV3Q9UKW4 847 aa18.9■□□□□ 0.62
COMMD4-224ENST00000568877 CIZ1Q9ULV3 898 aaPredicted RBP18.9■□□□□ 0.62
COMMD4-224ENST00000568877 PCDHA12Q9UN75 941 aa18.9■□□□□ 0.62
COMMD4-224ENST00000568877 ELP1O95163 1332 aa18.9■□□□□ 0.62
COMMD4-224ENST00000568877 ATG7O95352 703 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms