RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 SEMA3FQ13275 785 aa17.28■□□□□ 0.36
USB1-214ENST00000568848 UTP14CQ5TAP6 766 aaKnown RBP17.28■□□□□ 0.36
USB1-214ENST00000568848 IQCA1Q86XH1 822 aa17.28■□□□□ 0.36
USB1-214ENST00000568848 BANK1Q8NDB2 785 aa17.28■□□□□ 0.36
USB1-214ENST00000568848 NEK9Q8TD19 979 aa17.28■□□□□ 0.36
USB1-214ENST00000568848 PIGSQ96S52 555 aa17.28■□□□□ 0.36
USB1-214ENST00000568848 RNPEPQ9H4A4 650 aa17.28■□□□□ 0.36
USB1-214ENST00000568848 RTEL1Q9NZ71 1219 aa17.28■□□□□ 0.36
USB1-214ENST00000568848 MAD2L2Q9UI95 211 aa17.28■□□□□ 0.36
USB1-214ENST00000568848 TAF6LQ9Y6J9 622 aa17.28■□□□□ 0.36
USB1-214ENST00000568848 KLRF2D3W0D1 207 aa17.27■□□□□ 0.36
USB1-214ENST00000568848 VSIG10LQ86VR7 867 aa17.27■□□□□ 0.36
USB1-214ENST00000568848 TMEM192Q8IY95 271 aa17.27■□□□□ 0.36
USB1-214ENST00000568848 AMNQ9BXJ7 453 aa17.27■□□□□ 0.36
USB1-214ENST00000568848 MLXIPQ9HAP2 919 aa17.27■□□□□ 0.36
USB1-214ENST00000568848 CLDND1Q9NY35 253 aa17.27■□□□□ 0.36
USB1-214ENST00000568848 PCDHA1Q9Y5I3 950 aa17.27■□□□□ 0.36
USB1-214ENST00000568848 PRR33A8MZF0 331 aa17.26■□□□□ 0.35
USB1-214ENST00000568848 H3BRB1 525 aa17.26■□□□□ 0.35
USB1-214ENST00000568848 GRM6O15303 877 aa17.26■□□□□ 0.35
USB1-214ENST00000568848 LINC01565O15544 149 aa17.26■□□□□ 0.35
USB1-214ENST00000568848 PPFIA4O75335 1185 aa17.26■□□□□ 0.35
USB1-214ENST00000568848 PCP11498 1178 aaKnown RBP17.26■□□□□ 0.35
USB1-214ENST00000568848 LTBRP36941 435 aa17.26■□□□□ 0.35
USB1-214ENST00000568848 MRPS9P82933 396 aaKnown RBP17.26■□□□□ 0.35
USB1-214ENST00000568848 RUFY4Q6ZNE9 571 aa17.26■□□□□ 0.35
USB1-214ENST00000568848 STOX1Q6ZVD7 989 aa17.26■□□□□ 0.35
USB1-214ENST00000568848 PLEKHM2Q8IWE5 1019 aa17.26■□□□□ 0.35
USB1-214ENST00000568848 IFIH1Q9BYX4 1025 aaKnown RBP17.26■□□□□ 0.35
USB1-214ENST00000568848 TUT1Q9H6E5 874 aaKnown RBP17.26■□□□□ 0.35
USB1-214ENST00000568848 ZNF318Q5VUA4 2279 aa17.25■□□□□ 0.35
USB1-214ENST00000568848 H3BNC9 293 aa17.25■□□□□ 0.35
USB1-214ENST00000568848 CYTH3O43739 400 aa17.25■□□□□ 0.35
USB1-214ENST00000568848 EFCAB14O75071 495 aa17.25■□□□□ 0.35
USB1-214ENST00000568848 PARNO95453 639 aaKnown RBP17.25■□□□□ 0.35
USB1-214ENST00000568848 LINC00271P0C7V0 271 aa17.25■□□□□ 0.35
USB1-214ENST00000568848 CTNNB1P35222 781 aa17.25■□□□□ 0.35
USB1-214ENST00000568848 ZP2Q05996 745 aa17.25■□□□□ 0.35
USB1-214ENST00000568848 SEC23AQ15436 765 aa17.25■□□□□ 0.35
USB1-214ENST00000568848 IFIT1BQ5T764 474 aaKnown RBP17.25■□□□□ 0.35
USB1-214ENST00000568848 CYFIP1Q7L576 1253 aa17.25■□□□□ 0.35
USB1-214ENST00000568848 RPAINQ86UA6 219 aa17.25■□□□□ 0.35
USB1-214ENST00000568848 SEPT8Q92599 483 aa17.25■□□□□ 0.35
USB1-214ENST00000568848 TOP1MTQ969P6 601 aa17.25■□□□□ 0.35
USB1-214ENST00000568848 MTMR8Q96EF0 704 aa17.25■□□□□ 0.35
USB1-214ENST00000568848 PHOX2BQ99453 314 aa17.25■□□□□ 0.35
USB1-214ENST00000568848 COL4A6Q14031 1691 aa17.25■□□□□ 0.35
USB1-214ENST00000568848 EMSYQ7Z589 1322 aa17.24■□□□□ 0.35
USB1-214ENST00000568848 ZBTB5O15062 677 aa17.24■□□□□ 0.35
USB1-214ENST00000568848 IGHDP01880 384 aa17.24■□□□□ 0.35
USB1-214ENST00000568848 GHRP10912 638 aa17.24■□□□□ 0.35
USB1-214ENST00000568848 CCND2P30279 289 aa17.24■□□□□ 0.35
USB1-214ENST00000568848 HOXC8P31273 242 aa17.24■□□□□ 0.35
USB1-214ENST00000568848 ARHGAP4P98171 946 aa17.24■□□□□ 0.35
USB1-214ENST00000568848 HDAC1Q13547 482 aaPredicted RBP17.24■□□□□ 0.35
USB1-214ENST00000568848 FBXL18Q96ME1 805 aa17.24■□□□□ 0.35
USB1-214ENST00000568848 UBAC1Q9BSL1 405 aa17.24■□□□□ 0.35
USB1-214ENST00000568848 IGFLR1Q9H665 355 aa17.24■□□□□ 0.35
USB1-214ENST00000568848 DIAPH3Q9NSV4 1193 aa17.24■□□□□ 0.35
USB1-214ENST00000568848 MUTYHQ9UIF7 546 aa17.24■□□□□ 0.35
USB1-214ENST00000568848 POTEB3A0JP26 581 aa17.23■□□□□ 0.35
USB1-214ENST00000568848 DCXO43602 365 aa17.23■□□□□ 0.35
USB1-214ENST00000568848 CHRNA1P02708 482 aa17.23■□□□□ 0.35
USB1-214ENST00000568848 IBSPP21815 317 aaPredicted RBP17.23■□□□□ 0.35
USB1-214ENST00000568848 IRS1P35568 1242 aa17.23■□□□□ 0.35
USB1-214ENST00000568848 GHRHRQ02643 423 aa17.23■□□□□ 0.35
USB1-214ENST00000568848 HYAL1Q12794 435 aa17.23■□□□□ 0.35
USB1-214ENST00000568848 TIGD5Q53EQ6 642 aa17.23■□□□□ 0.35
USB1-214ENST00000568848 POTEBQ6S5H4 581 aa17.23■□□□□ 0.35
USB1-214ENST00000568848 HFE2Q6ZVN8 426 aa17.23■□□□□ 0.35
USB1-214ENST00000568848 LMBR1Q8WVP7 490 aa17.23■□□□□ 0.35
USB1-214ENST00000568848 PABPC5Q96DU9 382 aaKnown RBP17.23■□□□□ 0.35
USB1-214ENST00000568848 GPR20Q99678 358 aa17.23■□□□□ 0.35
USB1-214ENST00000568848 NSUN3Q9H649 340 aaKnown RBP17.23■□□□□ 0.35
USB1-214ENST00000568848 PKD2L1Q9P0L9 805 aa17.23■□□□□ 0.35
USB1-214ENST00000568848 PCDHGC5Q9Y5F6 944 aa17.23■□□□□ 0.35
USB1-214ENST00000568848 RALGAPA2Q2PPJ7 1873 aa17.22■□□□□ 0.35
USB1-214ENST00000568848 TECTAO75443 2155 aa17.22■□□□□ 0.35
USB1-214ENST00000568848 KIAA1671Q9BY89 1806 aa17.22■□□□□ 0.35
USB1-214ENST00000568848 PALM3A6NDB9 673 aaPredicted RBP17.22■□□□□ 0.35
USB1-214ENST00000568848 GCOM1H8Y6P7 765 aaPredicted RBP17.22■□□□□ 0.35
USB1-214ENST00000568848 NOP56O00567 594 aaKnown RBP17.22■□□□□ 0.35
USB1-214ENST00000568848 TBX10O75333 385 aa17.22■□□□□ 0.35
USB1-214ENST00000568848 POLR2MP0CAP2 368 aa17.22■□□□□ 0.35
USB1-214ENST00000568848 MARK3P27448 753 aa17.22■□□□□ 0.35
USB1-214ENST00000568848 MRE11P49959 708 aa17.22■□□□□ 0.35
USB1-214ENST00000568848 NHLH1Q02575 133 aa17.22■□□□□ 0.35
USB1-214ENST00000568848 PTPROQ16827 1216 aa17.22■□□□□ 0.35
USB1-214ENST00000568848 IMMTQ16891 758 aaKnown RBP17.22■□□□□ 0.35
USB1-214ENST00000568848 CSPP1Q1MSJ5 1256 aa17.22■□□□□ 0.35
USB1-214ENST00000568848 ARIH1Q9Y4X5 557 aaPredicted RBP17.22■□□□□ 0.35
USB1-214ENST00000568848 GATMP50440 423 aa17.21■□□□□ 0.35
USB1-214ENST00000568848 GRM4Q14833 912 aa17.21■□□□□ 0.35
USB1-214ENST00000568848 LINC01599Q8WXQ3 324 aa17.21■□□□□ 0.35
USB1-214ENST00000568848 MYL10Q9BUA6 226 aa17.21■□□□□ 0.35
USB1-214ENST00000568848 ALG13Q9NP73 1137 aaKnown RBP17.21■□□□□ 0.35
USB1-214ENST00000568848 DNAJB1P25685 340 aa17.2■□□□□ 0.34
USB1-214ENST00000568848 COL9A3Q14050 684 aaPredicted RBP17.2■□□□□ 0.34
USB1-214ENST00000568848 LPIN1Q14693 890 aa17.2■□□□□ 0.34
USB1-214ENST00000568848 CCDC178Q5BJE1 867 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms