RNA–Protein interactions for RNA: ENST00000567674.1

CDH3-206, Transcript of cadherin 3, humanhuman

TSL 3

Gene CDH3, Length 892 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-206ENST00000567674 UBIAD1Q9Y5Z9 338 aa12.83□□□□□ -0.36
CDH3-206ENST00000567674 EMSYQ7Z589 1322 aa12.83□□□□□ -0.36
CDH3-206ENST00000567674 CNTNAP5Q8WYK1 1306 aa12.83□□□□□ -0.36
CDH3-206ENST00000567674 KLF18A0A0U1RQI7 1052 aa12.82□□□□□ -0.36
CDH3-206ENST00000567674 GOLGA8AA7E2F4 631 aa12.82□□□□□ -0.36
CDH3-206ENST00000567674 GOLGA8BA8MQT2 603 aa12.82□□□□□ -0.36
CDH3-206ENST00000567674 PRPF3O43395 683 aaKnown RBP12.82□□□□□ -0.36
CDH3-206ENST00000567674 SELPP16109 830 aa12.82□□□□□ -0.36
CDH3-206ENST00000567674 CLK2P49760 499 aaKnown RBP12.82□□□□□ -0.36
CDH3-206ENST00000567674 ANAPC15P60006 121 aa12.82□□□□□ -0.36
CDH3-206ENST00000567674 KIAA0753Q2KHM9 967 aa12.82□□□□□ -0.36
CDH3-206ENST00000567674 FAM47CQ5HY64 1035 aa12.82□□□□□ -0.36
CDH3-206ENST00000567674 USP17L6PQ6QN14 398 aa12.82□□□□□ -0.36
CDH3-206ENST00000567674 RUFY3Q7L099 469 aa12.82□□□□□ -0.36
CDH3-206ENST00000567674 USP38Q8NB14 1042 aa12.82□□□□□ -0.36
CDH3-206ENST00000567674 IL31RAQ8NI17 732 aa12.82□□□□□ -0.36
CDH3-206ENST00000567674 BICD2Q8TD16 824 aa12.82□□□□□ -0.36
CDH3-206ENST00000567674 SEPT1Q8WYJ6 367 aa12.82□□□□□ -0.36
CDH3-206ENST00000567674 ZNF274Q96GC6 653 aaPredicted RBP12.82□□□□□ -0.36
CDH3-206ENST00000567674 JAKMIP1Q96N16 626 aaKnown RBP12.82□□□□□ -0.36
CDH3-206ENST00000567674 RNF26Q9BY78 433 aaPredicted RBP12.82□□□□□ -0.36
CDH3-206ENST00000567674 JADE2Q9NQC1 790 aa12.82□□□□□ -0.36
CDH3-206ENST00000567674 SH3GLB2Q9NR46 395 aa12.82□□□□□ -0.36
CDH3-206ENST00000567674 FAM217BQ9NTX9 383 aaPredicted RBP12.82□□□□□ -0.36
CDH3-206ENST00000567674 MSRAQ9UJ68 235 aa12.82□□□□□ -0.36
CDH3-206ENST00000567674 PCDHA6Q9UN73 950 aa12.82□□□□□ -0.36
CDH3-206ENST00000567674 PCDHA8Q9Y5H6 950 aa12.82□□□□□ -0.36
CDH3-206ENST00000567674 SLC4A7Q9Y6M7 1214 aa12.82□□□□□ -0.36
CDH3-206ENST00000567674 V9GY48 417 aaPredicted RBP12.82□□□□□ -0.36
CDH3-206ENST00000567674 NFASCO94856 1347 aa12.82□□□□□ -0.36
CDH3-206ENST00000567674 BAZ2BQ9UIF8 2168 aaKnown RBP12.81□□□□□ -0.36
CDH3-206ENST00000567674 CXCL10P02778 98 aa12.81□□□□□ -0.36
CDH3-206ENST00000567674 CENPBP07199 599 aaPredicted RBP12.81□□□□□ -0.36
CDH3-206ENST00000567674 DNAJB2P25686 324 aa12.81□□□□□ -0.36
CDH3-206ENST00000567674 SLC26A2P50443 739 aa12.81□□□□□ -0.36
CDH3-206ENST00000567674 NAPAP54920 295 aa12.81□□□□□ -0.36
CDH3-206ENST00000567674 MTMR1Q13613 665 aa12.81□□□□□ -0.36
CDH3-206ENST00000567674 GDF6Q6KF10 455 aaPredicted RBP12.81□□□□□ -0.36
CDH3-206ENST00000567674 Q6ZUG5 572 aa12.81□□□□□ -0.36
CDH3-206ENST00000567674 HEATR3Q7Z4Q2 680 aa12.81□□□□□ -0.36
CDH3-206ENST00000567674 ADAMTS19Q8TE59 1207 aa12.81□□□□□ -0.36
CDH3-206ENST00000567674 IL17RAQ96F46 866 aa12.81□□□□□ -0.36
CDH3-206ENST00000567674 ASB2Q96Q27 587 aa12.81□□□□□ -0.36
CDH3-206ENST00000567674 SLC9A7Q96T83 725 aa12.81□□□□□ -0.36
CDH3-206ENST00000567674 GPR20Q99678 358 aa12.81□□□□□ -0.36
CDH3-206ENST00000567674 LRRC2Q9BYS8 371 aa12.81□□□□□ -0.36
CDH3-206ENST00000567674 C22orf23Q9BZE7 217 aa12.81□□□□□ -0.36
CDH3-206ENST00000567674 ZMYND12Q9H0C1 365 aa12.81□□□□□ -0.36
CDH3-206ENST00000567674 HCN4Q9Y3Q4 1203 aa12.81□□□□□ -0.36
CDH3-206ENST00000567674 PCDHA11Q9Y5I1 949 aa12.81□□□□□ -0.36
CDH3-206ENST00000567674 NRCAMQ92823 1304 aa12.81□□□□□ -0.36
CDH3-206ENST00000567674 ABHD14A-ACY1A0A1B0GW23 586 aa12.8□□□□□ -0.36
CDH3-206ENST00000567674 SMCO2A6NFE2 343 aa12.8□□□□□ -0.36
CDH3-206ENST00000567674 LGALS2P05162 132 aa12.8□□□□□ -0.36
CDH3-206ENST00000567674 CYP3A4P08684 503 aa12.8□□□□□ -0.36
CDH3-206ENST00000567674 CYP2C9P11712 490 aa12.8□□□□□ -0.36
CDH3-206ENST00000567674 SCG2P13521 617 aa12.8□□□□□ -0.36
CDH3-206ENST00000567674 IFNAR1P17181 557 aa12.8□□□□□ -0.36
CDH3-206ENST00000567674 PTGS1P23219 599 aa12.8□□□□□ -0.36
CDH3-206ENST00000567674 SREBF1P36956 1147 aa12.8□□□□□ -0.36
CDH3-206ENST00000567674 ADCY7P51828 1080 aa12.8□□□□□ -0.36
CDH3-206ENST00000567674 CCL23P55773 120 aa12.8□□□□□ -0.36
CDH3-206ENST00000567674 AKAP17AQ02040 695 aaKnown RBP12.8□□□□□ -0.36
CDH3-206ENST00000567674 SEMA3FQ13275 785 aa12.8□□□□□ -0.36
CDH3-206ENST00000567674 CEP55Q53EZ4 464 aa12.8□□□□□ -0.36
CDH3-206ENST00000567674 WWC2Q6AWC2 1192 aa12.8□□□□□ -0.36
CDH3-206ENST00000567674 GALNT17Q6IS24 598 aa12.8□□□□□ -0.36
CDH3-206ENST00000567674 SERINC5Q86VE9 423 aa12.8□□□□□ -0.36
CDH3-206ENST00000567674 IL27Q8NEV9 243 aa12.8□□□□□ -0.36
CDH3-206ENST00000567674 TIFAQ96CG3 184 aa12.8□□□□□ -0.36
CDH3-206ENST00000567674 CTAGE1Q96RT6 745 aa12.8□□□□□ -0.36
CDH3-206ENST00000567674 UHRF1Q96T88 793 aaPredicted RBP12.8□□□□□ -0.36
CDH3-206ENST00000567674 MXRA8Q9BRK3 442 aa12.8□□□□□ -0.36
CDH3-206ENST00000567674 ZNF576Q9H609 170 aa12.8□□□□□ -0.36
CDH3-206ENST00000567674 C6orf50Q9HD87 102 aa12.8□□□□□ -0.36
CDH3-206ENST00000567674 HDAC6Q9UBN7 1215 aa12.8□□□□□ -0.36
CDH3-206ENST00000567674 CYP46A1Q9Y6A2 500 aa12.8□□□□□ -0.36
CDH3-206ENST00000567674 C17orf102A2RUQ5 167 aa12.79□□□□□ -0.36
CDH3-206ENST00000567674 KIF28PB7ZC32 967 aa12.79□□□□□ -0.36
CDH3-206ENST00000567674 STXBP3O00186 592 aa12.79□□□□□ -0.36
CDH3-206ENST00000567674 MEIS1O00470 390 aa12.79□□□□□ -0.36
CDH3-206ENST00000567674 CKBP12277 381 aa12.79□□□□□ -0.36
CDH3-206ENST00000567674 KCNA2P16389 499 aa12.79□□□□□ -0.36
CDH3-206ENST00000567674 ITGB5P18084 799 aa12.79□□□□□ -0.36
CDH3-206ENST00000567674 RXRAP19793 462 aa12.79□□□□□ -0.36
CDH3-206ENST00000567674 CDC27P30260 824 aa12.79□□□□□ -0.36
CDH3-206ENST00000567674 TAF2Q6P1X5 1199 aa12.79□□□□□ -0.36
CDH3-206ENST00000567674 CPLX2Q6PUV4 134 aaKnown RBP12.79□□□□□ -0.36
CDH3-206ENST00000567674 LRRC8DQ7L1W4 858 aa12.79□□□□□ -0.36
CDH3-206ENST00000567674 CYFIP1Q7L576 1253 aa12.79□□□□□ -0.36
CDH3-206ENST00000567674 PLPPR4Q7Z2D5 763 aa12.79□□□□□ -0.36
CDH3-206ENST00000567674 CMTR1Q8N1G2 835 aaKnown RBP12.79□□□□□ -0.36
CDH3-206ENST00000567674 CCDC82Q8N4S0 544 aa12.79□□□□□ -0.36
CDH3-206ENST00000567674 CCDC148Q8NFR7 591 aa12.79□□□□□ -0.36
CDH3-206ENST00000567674 BRF1Q92994 677 aa12.79□□□□□ -0.36
CDH3-206ENST00000567674 SMARCAD1Q9H4L7 1026 aa12.79□□□□□ -0.36
CDH3-206ENST00000567674 ERAP1Q9NZ08 941 aa12.79□□□□□ -0.36
CDH3-206ENST00000567674 THEGQ9P2T0 379 aa12.79□□□□□ -0.36
CDH3-206ENST00000567674 RRN3P2A6NIE6 340 aa12.78□□□□□ -0.36
CDH3-206ENST00000567674 PDIA3P30101 505 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms