RNA–Protein interactions for RNA: ENST00000567535.5

SCAMP5-213, Transcript of secretory carrier membrane protein 5, humanhuman

TSL 3

Gene SCAMP5, Length 593 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP5-213ENST00000567535 GRB10Q13322 594 aa22.8■■□□□ 1.24
SCAMP5-213ENST00000567535 NEDD9Q14511 834 aa22.8■■□□□ 1.24
SCAMP5-213ENST00000567535 SKIV2LQ15477 1246 aaKnown RBP22.8■■□□□ 1.24
SCAMP5-213ENST00000567535 AAK1Q2M2I8 961 aa22.8■■□□□ 1.24
SCAMP5-213ENST00000567535 KRT40Q6A162 431 aa22.8■■□□□ 1.24
SCAMP5-213ENST00000567535 METTL7BQ6UX53 244 aa22.8■■□□□ 1.24
SCAMP5-213ENST00000567535 RRP36Q96EU6 259 aaKnown RBP22.8■■□□□ 1.24
SCAMP5-213ENST00000567535 MYL10Q9BUA6 226 aa22.8■■□□□ 1.24
SCAMP5-213ENST00000567535 FIBPO43427 364 aa22.79■■□□□ 1.24
SCAMP5-213ENST00000567535 LPXNO60711 386 aa22.79■■□□□ 1.24
SCAMP5-213ENST00000567535 LGR5O75473 907 aa22.79■■□□□ 1.24
SCAMP5-213ENST00000567535 SMIM10L2AP0DMW4 78 aa22.79■■□□□ 1.24
SCAMP5-213ENST00000567535 SMIM10L2BP0DMW5 78 aa22.79■■□□□ 1.24
SCAMP5-213ENST00000567535 SMARCA1P28370 1054 aa22.79■■□□□ 1.24
SCAMP5-213ENST00000567535 THPOP40225 353 aa22.79■■□□□ 1.24
SCAMP5-213ENST00000567535 SEMA3FQ13275 785 aa22.79■■□□□ 1.24
SCAMP5-213ENST00000567535 ATP6V0A1Q93050 837 aa22.79■■□□□ 1.24
SCAMP5-213ENST00000567535 RAD9AQ99638 391 aa22.79■■□□□ 1.24
SCAMP5-213ENST00000567535 USP26Q9BXU7 913 aa22.79■■□□□ 1.24
SCAMP5-213ENST00000567535 DOCK5Q9H7D0 1870 aa22.79■■□□□ 1.24
SCAMP5-213ENST00000567535 RSPH10B2B2RC85 870 aa22.78■■□□□ 1.24
SCAMP5-213ENST00000567535 PIK3CDO00329 1044 aa22.78■■□□□ 1.24
SCAMP5-213ENST00000567535 PRC1O43663 620 aa22.78■■□□□ 1.24
SCAMP5-213ENST00000567535 RSPH10BP0C881 870 aa22.78■■□□□ 1.24
SCAMP5-213ENST00000567535 PCNX4Q63HM2 1172 aa22.78■■□□□ 1.24
SCAMP5-213ENST00000567535 CASC1Q6TDU7 716 aa22.78■■□□□ 1.24
SCAMP5-213ENST00000567535 CYFIP1Q7L576 1253 aa22.78■■□□□ 1.24
SCAMP5-213ENST00000567535 SMARCC2Q8TAQ2 1214 aa22.78■■□□□ 1.24
SCAMP5-213ENST00000567535 LZTS2Q9BRK4 669 aa22.78■■□□□ 1.24
SCAMP5-213ENST00000567535 SEC63Q9UGP8 760 aaKnown RBP22.78■■□□□ 1.24
SCAMP5-213ENST00000567535 MEIS2O14770 477 aa22.77■■□□□ 1.24
SCAMP5-213ENST00000567535 BMP1P13497 986 aa22.77■■□□□ 1.24
SCAMP5-213ENST00000567535 MKRN4PQ13434 485 aaPredicted RBP22.77■■□□□ 1.24
SCAMP5-213ENST00000567535 XRRA1Q6P2D8 792 aa22.77■■□□□ 1.24
SCAMP5-213ENST00000567535 USP17L6PQ6QN14 398 aa22.77■■□□□ 1.24
SCAMP5-213ENST00000567535 CUL5Q93034 780 aa22.77■■□□□ 1.24
SCAMP5-213ENST00000567535 GPR20Q99678 358 aa22.77■■□□□ 1.24
SCAMP5-213ENST00000567535 RTEL1Q9NZ71 1219 aa22.77■■□□□ 1.24
SCAMP5-213ENST00000567535 MICAL3Q7RTP6 2002 aa22.77■■□□□ 1.24
SCAMP5-213ENST00000567535 SIP14410 1827 aa22.76■■□□□ 1.23
SCAMP5-213ENST00000567535 RBAK-RBAKDNI3L0D1 243 aa22.76■■□□□ 1.23
SCAMP5-213ENST00000567535 SH2B2O14492 632 aaPredicted RBP22.76■■□□□ 1.23
SCAMP5-213ENST00000567535 CAND2O75155 1236 aa22.76■■□□□ 1.23
SCAMP5-213ENST00000567535 MCM5P33992 734 aa22.76■■□□□ 1.23
SCAMP5-213ENST00000567535 KCNQ1P51787 676 aa22.76■■□□□ 1.23
SCAMP5-213ENST00000567535 TMEM87BQ96K49 555 aa22.76■■□□□ 1.23
SCAMP5-213ENST00000567535 LSG1Q9H089 658 aaKnown RBP22.76■■□□□ 1.23
SCAMP5-213ENST00000567535 RNPEPQ9H4A4 650 aa22.76■■□□□ 1.23
SCAMP5-213ENST00000567535 COG5Q9UP83 839 aa22.76■■□□□ 1.23
SCAMP5-213ENST00000567535 LINC01553A4QN01 128 aa22.75■■□□□ 1.23
SCAMP5-213ENST00000567535 TREHO43280 583 aa22.75■■□□□ 1.23
SCAMP5-213ENST00000567535 PLEKHA8P1O95397 391 aa22.75■■□□□ 1.23
SCAMP5-213ENST00000567535 GNAQP50148 359 aa22.75■■□□□ 1.23
SCAMP5-213ENST00000567535 ERVK-21P61565 698 aa22.75■■□□□ 1.23
SCAMP5-213ENST00000567535 PLEKHG4Q58EX7 1191 aa22.75■■□□□ 1.23
SCAMP5-213ENST00000567535 NFXL1Q6ZNB6 911 aa22.75■■□□□ 1.23
SCAMP5-213ENST00000567535 TRIM50Q86XT4 487 aa22.75■■□□□ 1.23
SCAMP5-213ENST00000567535 TMTC2Q8N394 836 aa22.75■■□□□ 1.23
SCAMP5-213ENST00000567535 DBF4BQ8NFT6 615 aa22.75■■□□□ 1.23
SCAMP5-213ENST00000567535 GDPD5Q8WTR4 605 aa22.75■■□□□ 1.23
SCAMP5-213ENST00000567535 TGS1Q96RS0 853 aaKnown RBP22.75■■□□□ 1.23
SCAMP5-213ENST00000567535 SENP7Q9BQF6 1050 aa22.75■■□□□ 1.23
SCAMP5-213ENST00000567535 LMCD1Q9NZU5 365 aa22.75■■□□□ 1.23
SCAMP5-213ENST00000567535 ZNF215Q9UL58 517 aaPredicted RBP22.75■■□□□ 1.23
SCAMP5-213ENST00000567535 CCDC69A6NI79 296 aa22.74■■□□□ 1.23
SCAMP5-213ENST00000567535 LIFRP42702 1097 aa22.74■■□□□ 1.23
SCAMP5-213ENST00000567535 COL9A3Q14050 684 aaPredicted RBP22.74■■□□□ 1.23
SCAMP5-213ENST00000567535 FAM117BQ6P1L5 589 aa22.74■■□□□ 1.23
SCAMP5-213ENST00000567535 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.74■■□□□ 1.23
SCAMP5-213ENST00000567535 SRBD1Q8N5C6 995 aaKnown RBP22.74■■□□□ 1.23
SCAMP5-213ENST00000567535 MTUS1Q9ULD2 1270 aa22.74■■□□□ 1.23
SCAMP5-213ENST00000567535 TCF20Q9UGU0 1960 aaKnown RBP22.73■■□□□ 1.23
SCAMP5-213ENST00000567535 SLC27A2O14975 620 aa22.73■■□□□ 1.23
SCAMP5-213ENST00000567535 AMHP03971 560 aa22.73■■□□□ 1.23
SCAMP5-213ENST00000567535 CALM1P0DP23 149 aa22.73■■□□□ 1.23
SCAMP5-213ENST00000567535 CALM2P0DP24 149 aa22.73■■□□□ 1.23
SCAMP5-213ENST00000567535 CALM3P0DP25 149 aa22.73■■□□□ 1.23
SCAMP5-213ENST00000567535 GNAT1P11488 350 aa22.73■■□□□ 1.23
SCAMP5-213ENST00000567535 NLRX1Q86UT6 975 aa22.73■■□□□ 1.23
SCAMP5-213ENST00000567535 NECAB3Q96P71 396 aaPredicted RBP22.73■■□□□ 1.23
SCAMP5-213ENST00000567535 SUGCTQ9HAC7 445 aa22.73■■□□□ 1.23
SCAMP5-213ENST00000567535 SETD4Q9NVD3 440 aa22.73■■□□□ 1.23
SCAMP5-213ENST00000567535 TELO2Q9Y4R8 837 aa22.73■■□□□ 1.23
SCAMP5-213ENST00000567535 INSL6Q9Y581 213 aa22.73■■□□□ 1.23
SCAMP5-213ENST00000567535 CTSHP09668 335 aa22.72■■□□□ 1.23
SCAMP5-213ENST00000567535 RXRAP19793 462 aa22.72■■□□□ 1.23
SCAMP5-213ENST00000567535 ADAM17P78536 824 aa22.72■■□□□ 1.23
SCAMP5-213ENST00000567535 MYOCDQ8IZQ8 938 aa22.72■■□□□ 1.23
SCAMP5-213ENST00000567535 CMTR1Q8N1G2 835 aaKnown RBP22.72■■□□□ 1.23
SCAMP5-213ENST00000567535 GIMAP8Q8ND71 665 aaPredicted RBP22.72■■□□□ 1.23
SCAMP5-213ENST00000567535 HLA-CQ95604 372 aa22.72■■□□□ 1.23
SCAMP5-213ENST00000567535 GPRASP2Q96D09 838 aa22.72■■□□□ 1.23
SCAMP5-213ENST00000567535 ESYT1Q9BSJ8 1104 aa22.72■■□□□ 1.23
SCAMP5-213ENST00000567535 HTRA4P83105 476 aaPredicted RBP22.71■■□□□ 1.23
SCAMP5-213ENST00000567535 SP4Q02446 784 aa22.71■■□□□ 1.23
SCAMP5-213ENST00000567535 UTP14CQ5TAP6 766 aaKnown RBP22.71■■□□□ 1.23
SCAMP5-213ENST00000567535 LMBR1Q8WVP7 490 aa22.71■■□□□ 1.23
SCAMP5-213ENST00000567535 SEPT8Q92599 483 aa22.71■■□□□ 1.23
SCAMP5-213ENST00000567535 PSTPIP2Q9H939 334 aa22.71■■□□□ 1.23
SCAMP5-213ENST00000567535 COL4A6Q14031 1691 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms