RNA–Protein interactions for RNA: ENST00000567434.5

CCNDBP1-211, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 3

Gene CCNDBP1, Length 713 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-211ENST00000567434 CCL23P55773 120 aa19.56■□□□□ 0.72
CCNDBP1-211ENST00000567434 CHMP4BP1P59074 171 aa19.56■□□□□ 0.72
CCNDBP1-211ENST00000567434 MTMR1Q13613 665 aa19.56■□□□□ 0.72
CCNDBP1-211ENST00000567434 NTRK3Q16288 839 aa19.56■□□□□ 0.72
CCNDBP1-211ENST00000567434 C16orf59Q7L2K0 433 aa19.56■□□□□ 0.72
CCNDBP1-211ENST00000567434 CYFIP1Q7L576 1253 aa19.56■□□□□ 0.72
CCNDBP1-211ENST00000567434 RETREG2Q8NC44 543 aa19.56■□□□□ 0.72
CCNDBP1-211ENST00000567434 C16orf70Q9BSU1 422 aa19.56■□□□□ 0.72
CCNDBP1-211ENST00000567434 UPF3BQ9BZI7 483 aaKnown RBP19.56■□□□□ 0.72
CCNDBP1-211ENST00000567434 ZMYND12Q9H0C1 365 aa19.56■□□□□ 0.72
CCNDBP1-211ENST00000567434 C6orf50Q9HD87 102 aa19.56■□□□□ 0.72
CCNDBP1-211ENST00000567434 JADE2Q9NQC1 790 aa19.56■□□□□ 0.72
CCNDBP1-211ENST00000567434 GNA11P29992 359 aa19.55■□□□□ 0.72
CCNDBP1-211ENST00000567434 SREBF1P36956 1147 aa19.55■□□□□ 0.72
CCNDBP1-211ENST00000567434 RBL2Q08999 1139 aa19.55■□□□□ 0.72
CCNDBP1-211ENST00000567434 RASIP1Q5U651 963 aa19.55■□□□□ 0.72
CCNDBP1-211ENST00000567434 GDF6Q6KF10 455 aaPredicted RBP19.55■□□□□ 0.72
CCNDBP1-211ENST00000567434 TRIM22Q8IYM9 498 aa19.55■□□□□ 0.72
CCNDBP1-211ENST00000567434 CCDC148Q8NFR7 591 aa19.55■□□□□ 0.72
CCNDBP1-211ENST00000567434 GUCD1Q96NT3 240 aa19.55■□□□□ 0.72
CCNDBP1-211ENST00000567434 GPR20Q99678 358 aa19.55■□□□□ 0.72
CCNDBP1-211ENST00000567434 ANO3Q9BYT9 981 aa19.55■□□□□ 0.72
CCNDBP1-211ENST00000567434 PDRG1Q9NUG6 133 aa19.55■□□□□ 0.72
CCNDBP1-211ENST00000567434 HDAC6Q9UBN7 1215 aa19.55■□□□□ 0.72
CCNDBP1-211ENST00000567434 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.54■□□□□ 0.72
CCNDBP1-211ENST00000567434 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.54■□□□□ 0.72
CCNDBP1-211ENST00000567434 H3BRB1 525 aa19.54■□□□□ 0.72
CCNDBP1-211ENST00000567434 SORBS3O60504 671 aa19.54■□□□□ 0.72
CCNDBP1-211ENST00000567434 PARNO95453 639 aaKnown RBP19.54■□□□□ 0.72
CCNDBP1-211ENST00000567434 FGBP02675 491 aa19.54■□□□□ 0.72
CCNDBP1-211ENST00000567434 LGALS2P05162 132 aa19.54■□□□□ 0.72
CCNDBP1-211ENST00000567434 KCNA2P16389 499 aa19.54■□□□□ 0.72
CCNDBP1-211ENST00000567434 PKN1Q16512 942 aa19.54■□□□□ 0.72
CCNDBP1-211ENST00000567434 CPLX2Q6PUV4 134 aaKnown RBP19.54■□□□□ 0.72
CCNDBP1-211ENST00000567434 ZNF365Q70YC5 407 aa19.54■□□□□ 0.72
CCNDBP1-211ENST00000567434 BICD2Q8TD16 824 aa19.54■□□□□ 0.72
CCNDBP1-211ENST00000567434 AFAP1L1Q8TED9 768 aa19.54■□□□□ 0.72
CCNDBP1-211ENST00000567434 HERVK_113Q902F9 699 aa19.54■□□□□ 0.72
CCNDBP1-211ENST00000567434 IL17RAQ96F46 866 aa19.54■□□□□ 0.72
CCNDBP1-211ENST00000567434 ALG1Q9BT22 464 aa19.54■□□□□ 0.72
CCNDBP1-211ENST00000567434 TUT1Q9H6E5 874 aaKnown RBP19.54■□□□□ 0.72
CCNDBP1-211ENST00000567434 ZNF215Q9UL58 517 aaPredicted RBP19.54■□□□□ 0.72
CCNDBP1-211ENST00000567434 TMEM265A0A087WTH1 108 aa19.53■□□□□ 0.72
CCNDBP1-211ENST00000567434 CPLX1O14810 134 aa19.53■□□□□ 0.72
CCNDBP1-211ENST00000567434 ACRP10323 421 aa19.53■□□□□ 0.72
CCNDBP1-211ENST00000567434 CCT2P78371 535 aaKnown RBP19.53■□□□□ 0.72
CCNDBP1-211ENST00000567434 PTK7Q13308 1070 aa19.53■□□□□ 0.72
CCNDBP1-211ENST00000567434 CEP55Q53EZ4 464 aa19.53■□□□□ 0.72
CCNDBP1-211ENST00000567434 NIPA1Q7RTP0 329 aa19.53■□□□□ 0.72
CCNDBP1-211ENST00000567434 FAM177A1Q8N128 213 aaPredicted RBP19.53■□□□□ 0.72
CCNDBP1-211ENST00000567434 REXO1Q8N1G1 1221 aaKnown RBP19.53■□□□□ 0.72
CCNDBP1-211ENST00000567434 PHKBQ93100 1093 aa19.53■□□□□ 0.72
CCNDBP1-211ENST00000567434 MXRA8Q9BRK3 442 aa19.53■□□□□ 0.72
CCNDBP1-211ENST00000567434 SLC26A6Q9BXS9 759 aa19.53■□□□□ 0.72
CCNDBP1-211ENST00000567434 BCAS3Q9H6U6 928 aa19.53■□□□□ 0.72
CCNDBP1-211ENST00000567434 NCOA5Q9HCD5 579 aaKnown RBP19.53■□□□□ 0.72
CCNDBP1-211ENST00000567434 SH3GLB2Q9NR46 395 aa19.53■□□□□ 0.72
CCNDBP1-211ENST00000567434 EYSQ5T1H1 3165 aa19.53■□□□□ 0.72
CCNDBP1-211ENST00000567434 TANC1Q9C0D5 1861 aa19.52■□□□□ 0.72
CCNDBP1-211ENST00000567434 IQCF3P0C7M6 154 aa19.52■□□□□ 0.72
CCNDBP1-211ENST00000567434 ANKRD1Q15327 319 aa19.52■□□□□ 0.72
CCNDBP1-211ENST00000567434 ZNF697Q5TEC3 545 aa19.52■□□□□ 0.72
CCNDBP1-211ENST00000567434 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.52■□□□□ 0.72
CCNDBP1-211ENST00000567434 PPP1R13LQ8WUF5 828 aa19.52■□□□□ 0.72
CCNDBP1-211ENST00000567434 SCLYQ96I15 445 aa19.52■□□□□ 0.72
CCNDBP1-211ENST00000567434 FAM161BQ96MY7 647 aa19.52■□□□□ 0.72
CCNDBP1-211ENST00000567434 CTAGE1Q96RT6 745 aa19.52■□□□□ 0.72
CCNDBP1-211ENST00000567434 KCNH7Q9NS40 1196 aa19.52■□□□□ 0.72
CCNDBP1-211ENST00000567434 ATP9AO75110 1047 aa19.51■□□□□ 0.71
CCNDBP1-211ENST00000567434 HOXC8P31273 242 aa19.51■□□□□ 0.71
CCNDBP1-211ENST00000567434 ARHGAP4P98171 946 aa19.51■□□□□ 0.71
CCNDBP1-211ENST00000567434 SSRP1Q08945 709 aaKnown RBP19.51■□□□□ 0.71
CCNDBP1-211ENST00000567434 SEPT1Q8WYJ6 367 aa19.51■□□□□ 0.71
CCNDBP1-211ENST00000567434 NFASCO94856 1347 aa19.51■□□□□ 0.71
CCNDBP1-211ENST00000567434 C17orf102A2RUQ5 167 aa19.5■□□□□ 0.71
CCNDBP1-211ENST00000567434 MEIS1O00470 390 aa19.5■□□□□ 0.71
CCNDBP1-211ENST00000567434 CDKL5O76039 1030 aa19.5■□□□□ 0.71
CCNDBP1-211ENST00000567434 CYP3A4P08684 503 aa19.5■□□□□ 0.71
CCNDBP1-211ENST00000567434 GNAT1P11488 350 aa19.5■□□□□ 0.71
CCNDBP1-211ENST00000567434 ACTN1P12814 892 aa19.5■□□□□ 0.71
CCNDBP1-211ENST00000567434 SELPP16109 830 aa19.5■□□□□ 0.71
CCNDBP1-211ENST00000567434 TCF7P36402 384 aaPredicted RBP19.5■□□□□ 0.71
CCNDBP1-211ENST00000567434 SDF4Q9BRK5 362 aa19.5■□□□□ 0.71
CCNDBP1-211ENST00000567434 COL25A1Q9BXS0 654 aaPredicted RBP19.5■□□□□ 0.71
CCNDBP1-211ENST00000567434 JPH1Q9HDC5 661 aaPredicted RBP19.5■□□□□ 0.71
CCNDBP1-211ENST00000567434 TMEM260Q9NX78 707 aa19.5■□□□□ 0.71
CCNDBP1-211ENST00000567434 DOCK5Q9H7D0 1870 aa19.5■□□□□ 0.71
CCNDBP1-211ENST00000567434 DEXIO95424 95 aa19.49■□□□□ 0.71
CCNDBP1-211ENST00000567434 SMIM10L2AP0DMW4 78 aa19.49■□□□□ 0.71
CCNDBP1-211ENST00000567434 SMIM10L2BP0DMW5 78 aa19.49■□□□□ 0.71
CCNDBP1-211ENST00000567434 ZNF76P36508 570 aa19.49■□□□□ 0.71
CCNDBP1-211ENST00000567434 SP4Q02446 784 aa19.49■□□□□ 0.71
CCNDBP1-211ENST00000567434 JAKMIP3Q5VZ66 844 aa19.49■□□□□ 0.71
CCNDBP1-211ENST00000567434 SERINC5Q86VE9 423 aa19.49■□□□□ 0.71
CCNDBP1-211ENST00000567434 CRYGNQ8WXF5 182 aa19.49■□□□□ 0.71
CCNDBP1-211ENST00000567434 DHX38Q92620 1227 aaKnown RBP19.49■□□□□ 0.71
CCNDBP1-211ENST00000567434 PGBD1Q96JS3 809 aa19.49■□□□□ 0.71
CCNDBP1-211ENST00000567434 SLC9A2Q9UBY0 812 aa19.49■□□□□ 0.71
CCNDBP1-211ENST00000567434 CAND2O75155 1236 aa19.48■□□□□ 0.71
CCNDBP1-211ENST00000567434 CKBP12277 381 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms