RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 ZNF862O60290 1169 aa4.06□□□□□ -1.76
HERPUD1-211ENST00000566550 H2AFYO75367 372 aaKnown RBP4.06□□□□□ -1.76
HERPUD1-211ENST00000566550 OFD1O75665 1012 aa4.06□□□□□ -1.76
HERPUD1-211ENST00000566550 RNASEH2AO75792 299 aaKnown RBP4.06□□□□□ -1.76
HERPUD1-211ENST00000566550 CFBP00751 764 aa4.06□□□□□ -1.76
HERPUD1-211ENST00000566550 CTSBP07858 339 aa4.06□□□□□ -1.76
HERPUD1-211ENST00000566550 ZNF865P0CJ78 1059 aaPredicted RBP4.06□□□□□ -1.76
HERPUD1-211ENST00000566550 RHCEP18577 417 aa4.06□□□□□ -1.76
HERPUD1-211ENST00000566550 ECE1P42892 770 aa4.06□□□□□ -1.76
HERPUD1-211ENST00000566550 MAPK9P45984 424 aa4.06□□□□□ -1.76
HERPUD1-211ENST00000566550 LSSP48449 732 aa4.06□□□□□ -1.76
HERPUD1-211ENST00000566550 GFRA1P56159 465 aa4.06□□□□□ -1.76
HERPUD1-211ENST00000566550 GJA9P57773 515 aa4.06□□□□□ -1.76
HERPUD1-211ENST00000566550 HNRNPUQ00839 825 aaKnown RBP eCLIP4.06□□□□□ -1.76
HERPUD1-211ENST00000566550 RHDQ02161 417 aa4.06□□□□□ -1.76
HERPUD1-211ENST00000566550 DSG1Q02413 1049 aa4.06□□□□□ -1.76
HERPUD1-211ENST00000566550 PUM3Q15397 648 aaKnown RBP4.06□□□□□ -1.76
HERPUD1-211ENST00000566550 DDB1Q16531 1140 aa4.06□□□□□ -1.76
HERPUD1-211ENST00000566550 INAVAQ3KP66 663 aa4.06□□□□□ -1.76
HERPUD1-211ENST00000566550 EXOSC6Q5RKV6 272 aaKnown RBP4.06□□□□□ -1.76
HERPUD1-211ENST00000566550 NOL9Q5SY16 702 aaKnown RBP4.06□□□□□ -1.76
HERPUD1-211ENST00000566550 POMZP3Q6PJE2 187 aa4.06□□□□□ -1.76
HERPUD1-211ENST00000566550 CMIPQ8IY22 773 aa4.06□□□□□ -1.76
HERPUD1-211ENST00000566550 ZNF513Q8N8E2 541 aaPredicted RBP4.06□□□□□ -1.76
HERPUD1-211ENST00000566550 CCDC89Q8N998 374 aa4.06□□□□□ -1.76
HERPUD1-211ENST00000566550 ZBTB34Q8NCN2 500 aa4.06□□□□□ -1.76
HERPUD1-211ENST00000566550 CCT6BQ92526 530 aa4.06□□□□□ -1.76
HERPUD1-211ENST00000566550 TRMT2BQ96GJ1 504 aaKnown RBP4.06□□□□□ -1.76
HERPUD1-211ENST00000566550 MPP4Q96JB8 637 aa4.06□□□□□ -1.76
HERPUD1-211ENST00000566550 CCDC74BQ96LY2 380 aa4.06□□□□□ -1.76
HERPUD1-211ENST00000566550 ZDHHC15Q96MV8 337 aa4.06□□□□□ -1.76
HERPUD1-211ENST00000566550 AIFM3Q96NN9 605 aa4.06□□□□□ -1.76
HERPUD1-211ENST00000566550 CRB3Q9BUF7 120 aa4.06□□□□□ -1.76
HERPUD1-211ENST00000566550 APOL5Q9BWW9 433 aa4.06□□□□□ -1.76
HERPUD1-211ENST00000566550 NAA15Q9BXJ9 866 aaKnown RBP4.06□□□□□ -1.76
HERPUD1-211ENST00000566550 TMPRSS13Q9BYE2 586 aa4.06□□□□□ -1.76
HERPUD1-211ENST00000566550 WNT10AQ9GZT5 417 aa4.06□□□□□ -1.76
HERPUD1-211ENST00000566550 NOL6Q9H6R4 1146 aaKnown RBP4.06□□□□□ -1.76
HERPUD1-211ENST00000566550 C1orf112Q9NSG2 853 aa4.06□□□□□ -1.76
HERPUD1-211ENST00000566550 CACNA2D2Q9NY47 1150 aa4.06□□□□□ -1.76
HERPUD1-211ENST00000566550 CGGBP1Q9UFW8 167 aaPredicted RBP4.06□□□□□ -1.76
HERPUD1-211ENST00000566550 ZC3H7BQ9UGR2 993 aaKnown RBP4.06□□□□□ -1.76
HERPUD1-211ENST00000566550 EVLQ9UI08 416 aaPredicted RBP4.06□□□□□ -1.76
HERPUD1-211ENST00000566550 FBXL21Q9UKT6 434 aa4.06□□□□□ -1.76
HERPUD1-211ENST00000566550 DNM3Q9UQ16 869 aa4.06□□□□□ -1.76
HERPUD1-211ENST00000566550 GPR55Q9Y2T6 319 aaPredicted RBP4.06□□□□□ -1.76
HERPUD1-211ENST00000566550 EMC9Q9Y3B6 208 aa4.06□□□□□ -1.76
HERPUD1-211ENST00000566550 SLC4A7Q9Y6M7 1214 aa4.06□□□□□ -1.76
HERPUD1-211ENST00000566550 KLRG2A4D1S0 409 aaPredicted RBP4.05□□□□□ -1.76
HERPUD1-211ENST00000566550 A6NNZ2 444 aa4.05□□□□□ -1.76
HERPUD1-211ENST00000566550 PRSS47A8MTI9 375 aa4.05□□□□□ -1.76
HERPUD1-211ENST00000566550 B8ZZF3 427 aa4.05□□□□□ -1.76
HERPUD1-211ENST00000566550 AQP7O14520 342 aa4.05□□□□□ -1.76
HERPUD1-211ENST00000566550 TPP1O14773 563 aa4.05□□□□□ -1.76
HERPUD1-211ENST00000566550 PCDHGA12O60330 932 aa4.05□□□□□ -1.76
HERPUD1-211ENST00000566550 KRT37O76014 449 aa4.05□□□□□ -1.76
HERPUD1-211ENST00000566550 TIAF1O95411 115 aa4.05□□□□□ -1.76
HERPUD1-211ENST00000566550 ATP2A2P16615 1042 aaKnown RBP4.05□□□□□ -1.76
HERPUD1-211ENST00000566550 CD247P20963 164 aa4.05□□□□□ -1.76
HERPUD1-211ENST00000566550 TNFAIP3P21580 790 aa4.05□□□□□ -1.76
HERPUD1-211ENST00000566550 CHKAP35790 457 aa4.05□□□□□ -1.76
HERPUD1-211ENST00000566550 CASP2P42575 452 aa4.05□□□□□ -1.76
HERPUD1-211ENST00000566550 RAP1GAPP47736 663 aa4.05□□□□□ -1.76
HERPUD1-211ENST00000566550 DNM2P50570 870 aa4.05□□□□□ -1.76
HERPUD1-211ENST00000566550 USP14P54578 494 aa4.05□□□□□ -1.76
HERPUD1-211ENST00000566550 SESN3P58005 492 aa4.05□□□□□ -1.76
HERPUD1-211ENST00000566550 OCRLQ01968 901 aa4.05□□□□□ -1.76
HERPUD1-211ENST00000566550 MAP4K2Q12851 820 aa4.05□□□□□ -1.76
HERPUD1-211ENST00000566550 DPY19L1Q2PZI1 675 aa4.05□□□□□ -1.76
HERPUD1-211ENST00000566550 RGL3Q3MIN7 710 aa4.05□□□□□ -1.76
HERPUD1-211ENST00000566550 RRP12Q5JTH9 1297 aaKnown RBP4.05□□□□□ -1.76
HERPUD1-211ENST00000566550 JAKMIP3Q5VZ66 844 aa4.05□□□□□ -1.76
HERPUD1-211ENST00000566550 SLFN12Q8IYM2 578 aa4.05□□□□□ -1.76
HERPUD1-211ENST00000566550 GRAMD1CQ8IYS0 662 aa4.05□□□□□ -1.76
HERPUD1-211ENST00000566550 CISD2Q8N5K1 135 aaKnown RBP4.05□□□□□ -1.76
HERPUD1-211ENST00000566550 BCL7CQ8WUZ0 217 aaPredicted RBP4.05□□□□□ -1.76
HERPUD1-211ENST00000566550 DIO2Q92813 273 aa4.05□□□□□ -1.76
HERPUD1-211ENST00000566550 SLC5A5Q92911 643 aa4.05□□□□□ -1.76
HERPUD1-211ENST00000566550 SKA1Q96BD8 255 aa4.05□□□□□ -1.76
HERPUD1-211ENST00000566550 TEKT5Q96M29 485 aa4.05□□□□□ -1.76
HERPUD1-211ENST00000566550 TAAR9Q96RI9 348 aa4.05□□□□□ -1.76
HERPUD1-211ENST00000566550 RC3H2Q9HBD1 1191 aaKnown RBP4.05□□□□□ -1.76
HERPUD1-211ENST00000566550 DDX21Q9NR30 783 aaKnown RBP eCLIP4.05□□□□□ -1.76
HERPUD1-211ENST00000566550 KRT82Q9NSB4 513 aa4.05□□□□□ -1.76
HERPUD1-211ENST00000566550 SAGE1Q9NXZ1 904 aa4.05□□□□□ -1.76
HERPUD1-211ENST00000566550 FBXO2Q9UK22 296 aaPredicted RBP4.05□□□□□ -1.76
HERPUD1-211ENST00000566550 ZNF652Q9Y2D9 606 aa4.05□□□□□ -1.76
HERPUD1-211ENST00000566550 RABGAP1Q9Y3P9 1069 aa4.05□□□□□ -1.76
HERPUD1-211ENST00000566550 PCDHGA9Q9Y5G4 932 aaKnown RBP4.05□□□□□ -1.76
HERPUD1-211ENST00000566550 PCDHGA8Q9Y5G5 932 aa4.05□□□□□ -1.76
HERPUD1-211ENST00000566550 PCDHGA7Q9Y5G6 932 aa4.05□□□□□ -1.76
HERPUD1-211ENST00000566550 PCDHGA6Q9Y5G7 932 aa4.05□□□□□ -1.76
HERPUD1-211ENST00000566550 PCDHGA3Q9Y5H0 932 aa4.05□□□□□ -1.76
HERPUD1-211ENST00000566550 PCDHGA2Q9Y5H1 932 aa4.05□□□□□ -1.76
HERPUD1-211ENST00000566550 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.05□□□□□ -1.76
HERPUD1-211ENST00000566550 CARMIL2Q6F5E8 1435 aa4.04□□□□□ -1.76
HERPUD1-211ENST00000566550 NCANO14594 1321 aa4.04□□□□□ -1.76
HERPUD1-211ENST00000566550 A0A087WZG4 1122 aa4.04□□□□□ -1.76
HERPUD1-211ENST00000566550 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.04□□□□□ -1.76
HERPUD1-211ENST00000566550 hCG_1642624A0A1W2PR95 340 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms