RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 MTG1Q9BT17 334 aaPredicted RBP23.95■■□□□ 1.42
SHCBP1-205ENST00000566016 CYP3A7-CYP3A51PA0A087WV96 503 aa23.94■■□□□ 1.42
SHCBP1-205ENST00000566016 CYP3A7P24462 503 aa23.94■■□□□ 1.42
SHCBP1-205ENST00000566016 ATN1P54259 1190 aaPredicted RBP23.94■■□□□ 1.42
SHCBP1-205ENST00000566016 SAFBQ15424 915 aaKnown RBP eCLIP23.94■■□□□ 1.42
SHCBP1-205ENST00000566016 PLA2G4DQ86XP0 818 aa23.94■■□□□ 1.42
SHCBP1-205ENST00000566016 SLC43A3Q8NBI5 491 aa23.94■■□□□ 1.42
SHCBP1-205ENST00000566016 LENG9Q96B70 501 aa23.94■■□□□ 1.42
SHCBP1-205ENST00000566016 AGO4Q9HCK5 861 aaKnown RBP23.94■■□□□ 1.42
SHCBP1-205ENST00000566016 MROH7Q68CQ1 1323 aa23.94■■□□□ 1.42
SHCBP1-205ENST00000566016 EVI5O60447 810 aa23.94■■□□□ 1.42
SHCBP1-205ENST00000566016 ARP10275 920 aa23.94■■□□□ 1.42
SHCBP1-205ENST00000566016 NR5A1Q13285 461 aa23.94■■□□□ 1.42
SHCBP1-205ENST00000566016 DPF3Q92784 378 aa23.94■■□□□ 1.42
SHCBP1-205ENST00000566016 MBOAT7Q96N66 472 aa23.94■■□□□ 1.42
SHCBP1-205ENST00000566016 BTBD18B2RXH4 712 aa23.93■■□□□ 1.42
SHCBP1-205ENST00000566016 K7ELQ4 463 aaPredicted RBP23.93■■□□□ 1.42
SHCBP1-205ENST00000566016 NOP56O00567 594 aaKnown RBP23.93■■□□□ 1.42
SHCBP1-205ENST00000566016 F2P00734 622 aa23.93■■□□□ 1.42
SHCBP1-205ENST00000566016 MYL3P08590 195 aa23.93■■□□□ 1.42
SHCBP1-205ENST00000566016 CDK7P50613 346 aa23.93■■□□□ 1.42
SHCBP1-205ENST00000566016 RTP1P59025 263 aa23.93■■□□□ 1.42
SHCBP1-205ENST00000566016 INF2Q27J81 1249 aa23.93■■□□□ 1.42
SHCBP1-205ENST00000566016 PIK3AP1Q6ZUJ8 805 aa23.93■■□□□ 1.42
SHCBP1-205ENST00000566016 ANKRD33Q7Z3H0 272 aa23.93■■□□□ 1.42
SHCBP1-205ENST00000566016 NEK8Q86SG6 692 aa23.93■■□□□ 1.42
SHCBP1-205ENST00000566016 GPR20Q99678 358 aa23.93■■□□□ 1.42
SHCBP1-205ENST00000566016 SDF4Q9BRK5 362 aa23.93■■□□□ 1.42
SHCBP1-205ENST00000566016 BCAS3Q9H6U6 928 aa23.93■■□□□ 1.42
SHCBP1-205ENST00000566016 JPH1Q9HDC5 661 aaPredicted RBP23.93■■□□□ 1.42
SHCBP1-205ENST00000566016 WDR81Q562E7 1941 aa23.93■■□□□ 1.42
SHCBP1-205ENST00000566016 ARVCFO00192 962 aa23.92■■□□□ 1.42
SHCBP1-205ENST00000566016 IPO5O00410 1097 aaKnown RBP23.92■■□□□ 1.42
SHCBP1-205ENST00000566016 GCFC2P16383 781 aaKnown RBP23.92■■□□□ 1.42
SHCBP1-205ENST00000566016 ITGB3BPQ13352 177 aaPredicted RBP23.92■■□□□ 1.42
SHCBP1-205ENST00000566016 Q4G0T1 1027 aa23.92■■□□□ 1.42
SHCBP1-205ENST00000566016 PRR16Q569H4 304 aa23.92■■□□□ 1.42
SHCBP1-205ENST00000566016 TOX2Q96NM4 488 aa23.92■■□□□ 1.42
SHCBP1-205ENST00000566016 NAP1L4Q99733 375 aaKnown RBP23.92■■□□□ 1.42
SHCBP1-205ENST00000566016 FOXP1Q9H334 677 aaPredicted RBP23.92■■□□□ 1.42
SHCBP1-205ENST00000566016 SMC3Q9UQE7 1217 aa23.92■■□□□ 1.42
SHCBP1-205ENST00000566016 NR2E3Q9Y5X4 410 aa23.92■■□□□ 1.42
SHCBP1-205ENST00000566016 GJB2P29033 226 aa23.91■■□□□ 1.42
SHCBP1-205ENST00000566016 FOSBP53539 338 aa23.91■■□□□ 1.42
SHCBP1-205ENST00000566016 ITGA7Q13683 1181 aa23.91■■□□□ 1.42
SHCBP1-205ENST00000566016 TRIM60Q495X7 471 aa23.91■■□□□ 1.42
SHCBP1-205ENST00000566016 PPP4R3AQ6IN85 833 aa23.91■■□□□ 1.42
SHCBP1-205ENST00000566016 VTI1AQ96AJ9 217 aa23.91■■□□□ 1.42
SHCBP1-205ENST00000566016 INTS4Q96HW7 963 aaKnown RBP23.91■■□□□ 1.42
SHCBP1-205ENST00000566016 KATNAL1Q9BW62 490 aa23.91■■□□□ 1.42
SHCBP1-205ENST00000566016 GRIN2DO15399 1336 aa23.91■■□□□ 1.42
SHCBP1-205ENST00000566016 GUCY1B3Q02153 619 aa23.9■■□□□ 1.42
SHCBP1-205ENST00000566016 KAT2BQ92831 832 aa23.9■■□□□ 1.42
SHCBP1-205ENST00000566016 ZNF577Q9BSK1 485 aa23.9■■□□□ 1.42
SHCBP1-205ENST00000566016 TBC1D22BQ9NU19 505 aa23.9■■□□□ 1.42
SHCBP1-205ENST00000566016 SLC9A2Q9UBY0 812 aa23.9■■□□□ 1.42
SHCBP1-205ENST00000566016 MYH9P35579 1960 aaKnown RBP23.9■■□□□ 1.42
SHCBP1-205ENST00000566016 SORBS3O60504 671 aa23.89■■□□□ 1.42
SHCBP1-205ENST00000566016 TDP2O95551 362 aa23.89■■□□□ 1.42
SHCBP1-205ENST00000566016 EARS2Q5JPH6 523 aaKnown RBP23.89■■□□□ 1.42
SHCBP1-205ENST00000566016 NFRKBQ6P4R8 1299 aa23.89■■□□□ 1.42
SHCBP1-205ENST00000566016 C16orf70Q9BSU1 422 aa23.89■■□□□ 1.42
SHCBP1-205ENST00000566016 PKD2L1Q9P0L9 805 aa23.89■■□□□ 1.42
SHCBP1-205ENST00000566016 ATP11BQ9Y2G3 1177 aa23.89■■□□□ 1.42
SHCBP1-205ENST00000566016 KAT6AQ92794 2004 aa23.89■■□□□ 1.41
SHCBP1-205ENST00000566016 HAS3O00219 553 aa23.88■■□□□ 1.41
SHCBP1-205ENST00000566016 DHX15O43143 795 aaKnown RBP23.88■■□□□ 1.41
SHCBP1-205ENST00000566016 ZNF286BP0CG31 522 aa23.88■■□□□ 1.41
SHCBP1-205ENST00000566016 TLE2Q04725 743 aa23.88■■□□□ 1.41
SHCBP1-205ENST00000566016 LETM2Q2VYF4 491 aa23.88■■□□□ 1.41
SHCBP1-205ENST00000566016 C7orf61Q8IZ16 206 aa23.88■■□□□ 1.41
SHCBP1-205ENST00000566016 SEPT1Q8WYJ6 367 aa23.88■■□□□ 1.41
SHCBP1-205ENST00000566016 LTBP2Q14767 1821 aa23.88■■□□□ 1.41
SHCBP1-205ENST00000566016 LGALS2P05162 132 aa23.87■■□□□ 1.41
SHCBP1-205ENST00000566016 PSMC6P62333 389 aa23.87■■□□□ 1.41
SHCBP1-205ENST00000566016 PTPN11Q06124 597 aaPredicted RBP23.87■■□□□ 1.41
SHCBP1-205ENST00000566016 SESTD1Q86VW0 696 aa23.87■■□□□ 1.41
SHCBP1-205ENST00000566016 FAM126BQ8IXS8 530 aa23.87■■□□□ 1.41
SHCBP1-205ENST00000566016 RIT2Q99578 217 aa23.87■■□□□ 1.41
SHCBP1-205ENST00000566016 DDX25Q9UHL0 483 aaKnown RBP23.87■■□□□ 1.41
SHCBP1-205ENST00000566016 EMSYQ7Z589 1322 aa23.87■■□□□ 1.41
SHCBP1-205ENST00000566016 FAM205CA6NFA0 338 aa23.87■■□□□ 1.41
SHCBP1-205ENST00000566016 DCDC2CA8MYV0 355 aa23.87■■□□□ 1.41
SHCBP1-205ENST00000566016 MSH4O15457 936 aa23.87■■□□□ 1.41
SHCBP1-205ENST00000566016 PQBP1O60828 265 aaKnown RBP23.87■■□□□ 1.41
SHCBP1-205ENST00000566016 U2AF2P26368 475 aaKnown RBP eCLIP23.87■■□□□ 1.41
SHCBP1-205ENST00000566016 TCF7P36402 384 aaPredicted RBP23.87■■□□□ 1.41
SHCBP1-205ENST00000566016 NBPF20Q3BBV1 942 aa23.87■■□□□ 1.41
SHCBP1-205ENST00000566016 HSCBQ8IWL3 235 aa23.87■■□□□ 1.41
SHCBP1-205ENST00000566016 SLC5A5Q92911 643 aa23.87■■□□□ 1.41
SHCBP1-205ENST00000566016 GSTTP1A0A1W2PQM5 241 aa23.86■■□□□ 1.41
SHCBP1-205ENST00000566016 ACTR2P61160 394 aa23.86■■□□□ 1.41
SHCBP1-205ENST00000566016 KRT76Q01546 638 aa23.86■■□□□ 1.41
SHCBP1-205ENST00000566016 SP4Q02446 784 aa23.86■■□□□ 1.41
SHCBP1-205ENST00000566016 ZNF746Q6NUN9 644 aaPredicted RBP23.86■■□□□ 1.41
SHCBP1-205ENST00000566016 NOSTRINQ8IVI9 506 aa23.86■■□□□ 1.41
SHCBP1-205ENST00000566016 ETNPPLQ8TBG4 499 aa23.86■■□□□ 1.41
SHCBP1-205ENST00000566016 ZNF215Q9UL58 517 aaPredicted RBP23.86■■□□□ 1.41
SHCBP1-205ENST00000566016 TELO2Q9Y4R8 837 aa23.86■■□□□ 1.41
SHCBP1-205ENST00000566016 TRIP12Q14669 1992 aaPredicted RBP23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms