RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 MICU3Q86XE3 530 aa27.37■■□□□ 1.97
RAB40C-209ENST00000565511 RASEFQ8IZ41 740 aa27.37■■□□□ 1.97
RAB40C-209ENST00000565511 CCDC82Q8N4S0 544 aa27.37■■□□□ 1.97
RAB40C-209ENST00000565511 GPR20Q99678 358 aa27.37■■□□□ 1.97
RAB40C-209ENST00000565511 SEC63Q9UGP8 760 aaKnown RBP27.37■■□□□ 1.97
RAB40C-209ENST00000565511 MICAL3Q7RTP6 2002 aa27.36■■□□□ 1.97
RAB40C-209ENST00000565511 GNPTABQ3T906 1256 aa27.36■■□□□ 1.97
RAB40C-209ENST00000565511 PCNX4Q63HM2 1172 aa27.36■■□□□ 1.97
RAB40C-209ENST00000565511 METTL7BQ6UX53 244 aa27.36■■□□□ 1.97
RAB40C-209ENST00000565511 PHOSPHO2Q8TCD6 241 aa27.36■■□□□ 1.97
RAB40C-209ENST00000565511 OSBPL7Q9BZF2 842 aa27.36■■□□□ 1.97
RAB40C-209ENST00000565511 LCHNA4D1U4 455 aa27.35■■□□□ 1.97
RAB40C-209ENST00000565511 FIBPO43427 364 aa27.35■■□□□ 1.97
RAB40C-209ENST00000565511 BAIAP3O94812 1187 aa27.35■■□□□ 1.97
RAB40C-209ENST00000565511 SMIM10L2AP0DMW4 78 aa27.35■■□□□ 1.97
RAB40C-209ENST00000565511 SMIM10L2BP0DMW5 78 aa27.35■■□□□ 1.97
RAB40C-209ENST00000565511 GNAQP50148 359 aa27.35■■□□□ 1.97
RAB40C-209ENST00000565511 TAP1Q03518 808 aa27.35■■□□□ 1.97
RAB40C-209ENST00000565511 ADCK5Q3MIX3 580 aa27.35■■□□□ 1.97
RAB40C-209ENST00000565511 SERINC5Q86VE9 423 aa27.35■■□□□ 1.97
RAB40C-209ENST00000565511 SGMS1Q86VZ5 419 aa27.35■■□□□ 1.97
RAB40C-209ENST00000565511 TMTC2Q8N394 836 aa27.35■■□□□ 1.97
RAB40C-209ENST00000565511 SLC12A7Q9Y666 1083 aa27.35■■□□□ 1.97
RAB40C-209ENST00000565511 CNTNAP5Q8WYK1 1306 aa27.35■■□□□ 1.97
RAB40C-209ENST00000565511 H3BRB1 525 aa27.34■■□□□ 1.97
RAB40C-209ENST00000565511 STAM2O75886 525 aa27.34■■□□□ 1.97
RAB40C-209ENST00000565511 SP4Q02446 784 aa27.34■■□□□ 1.97
RAB40C-209ENST00000565511 CNKSR3Q6P9H4 555 aa27.34■■□□□ 1.97
RAB40C-209ENST00000565511 FANCBQ8NB91 859 aa27.34■■□□□ 1.97
RAB40C-209ENST00000565511 CUL5Q93034 780 aa27.34■■□□□ 1.97
RAB40C-209ENST00000565511 TUT1Q9H6E5 874 aaKnown RBP27.34■■□□□ 1.97
RAB40C-209ENST00000565511 BRPF3Q9ULD4 1205 aa27.34■■□□□ 1.97
RAB40C-209ENST00000565511 SIP14410 1827 aa27.33■■□□□ 1.97
RAB40C-209ENST00000565511 TREHO43280 583 aa27.33■■□□□ 1.97
RAB40C-209ENST00000565511 CALM1P0DP23 149 aa27.33■■□□□ 1.97
RAB40C-209ENST00000565511 CALM2P0DP24 149 aa27.33■■□□□ 1.97
RAB40C-209ENST00000565511 CALM3P0DP25 149 aa27.33■■□□□ 1.97
RAB40C-209ENST00000565511 KRT40Q6A162 431 aa27.33■■□□□ 1.97
RAB40C-209ENST00000565511 TYW1BQ6NUM6 668 aa27.33■■□□□ 1.97
RAB40C-209ENST00000565511 APOA5Q6Q788 366 aa27.33■■□□□ 1.97
RAB40C-209ENST00000565511 C17orf102A2RUQ5 167 aa27.32■■□□□ 1.96
RAB40C-209ENST00000565511 NOP56O00567 594 aaKnown RBP27.32■■□□□ 1.96
RAB40C-209ENST00000565511 ATP9AO75110 1047 aa27.32■■□□□ 1.96
RAB40C-209ENST00000565511 ITGB5P18084 799 aa27.32■■□□□ 1.96
RAB40C-209ENST00000565511 EXOSC10Q01780 885 aaKnown RBP27.32■■□□□ 1.96
RAB40C-209ENST00000565511 NEDD9Q14511 834 aa27.32■■□□□ 1.96
RAB40C-209ENST00000565511 RNPEPQ9H4A4 650 aa27.32■■□□□ 1.96
RAB40C-209ENST00000565511 PSTPIP2Q9H939 334 aa27.32■■□□□ 1.96
RAB40C-209ENST00000565511 KCNA2P16389 499 aa27.31■■□□□ 1.96
RAB40C-209ENST00000565511 KCNJ6P48051 423 aa27.31■■□□□ 1.96
RAB40C-209ENST00000565511 FUT2Q10981 343 aa27.31■■□□□ 1.96
RAB40C-209ENST00000565511 MKRN4PQ13434 485 aaPredicted RBP27.31■■□□□ 1.96
RAB40C-209ENST00000565511 UTP14CQ5TAP6 766 aaKnown RBP27.31■■□□□ 1.96
RAB40C-209ENST00000565511 WWC2Q6AWC2 1192 aa27.31■■□□□ 1.96
RAB40C-209ENST00000565511 MICALL1Q8N3F8 863 aa27.31■■□□□ 1.96
RAB40C-209ENST00000565511 ATP6V0A1Q93050 837 aa27.31■■□□□ 1.96
RAB40C-209ENST00000565511 NEK1Q96PY6 1258 aa27.31■■□□□ 1.96
RAB40C-209ENST00000565511 THPOP40225 353 aa27.3■■□□□ 1.96
RAB40C-209ENST00000565511 HEATR3Q7Z4Q2 680 aa27.3■■□□□ 1.96
RAB40C-209ENST00000565511 ARNTL2Q8WYA1 636 aa27.3■■□□□ 1.96
RAB40C-209ENST00000565511 SETD4Q9NVD3 440 aa27.3■■□□□ 1.96
RAB40C-209ENST00000565511 KAT6AQ92794 2004 aa27.29■■□□□ 1.96
RAB40C-209ENST00000565511 TLL1O43897 1013 aa27.29■■□□□ 1.96
RAB40C-209ENST00000565511 XRRA1Q6P2D8 792 aa27.29■■□□□ 1.96
RAB40C-209ENST00000565511 SENP7Q9BQF6 1050 aa27.29■■□□□ 1.96
RAB40C-209ENST00000565511 PKD2L1Q9P0L9 805 aa27.29■■□□□ 1.96
RAB40C-209ENST00000565511 UBIAD1Q9Y5Z9 338 aa27.29■■□□□ 1.96
RAB40C-209ENST00000565511 MTCH2Q9Y6C9 303 aa27.29■■□□□ 1.96
RAB40C-209ENST00000565511 CDC45O75419 566 aa27.28■■□□□ 1.96
RAB40C-209ENST00000565511 LGR5O75473 907 aa27.28■■□□□ 1.96
RAB40C-209ENST00000565511 PARNO95453 639 aaKnown RBP27.28■■□□□ 1.96
RAB40C-209ENST00000565511 CTSHP09668 335 aa27.28■■□□□ 1.96
RAB40C-209ENST00000565511 CPA1P15085 419 aa27.28■■□□□ 1.96
RAB40C-209ENST00000565511 ADAM17P78536 824 aa27.28■■□□□ 1.96
RAB40C-209ENST00000565511 TJAP1Q5JTD0 557 aa27.28■■□□□ 1.96
RAB40C-209ENST00000565511 LIN28BQ6ZN17 250 aaKnown RBP eCLIP27.28■■□□□ 1.96
RAB40C-209ENST00000565511 GPRASP2Q96D09 838 aa27.28■■□□□ 1.96
RAB40C-209ENST00000565511 PGBD1Q96JS3 809 aa27.28■■□□□ 1.96
RAB40C-209ENST00000565511 USP26Q9BXU7 913 aa27.28■■□□□ 1.96
RAB40C-209ENST00000565511 FAM217BQ9NTX9 383 aaPredicted RBP27.28■■□□□ 1.96
RAB40C-209ENST00000565511 THEGQ9P2T0 379 aa27.28■■□□□ 1.96
RAB40C-209ENST00000565511 PCDHA6Q9UN73 950 aa27.28■■□□□ 1.96
RAB40C-209ENST00000565511 PCDHA8Q9Y5H6 950 aa27.28■■□□□ 1.96
RAB40C-209ENST00000565511 RSPH10B2B2RC85 870 aa27.27■■□□□ 1.96
RAB40C-209ENST00000565511 RSPH10BP0C881 870 aa27.27■■□□□ 1.96
RAB40C-209ENST00000565511 TSGA10IPQ3SY00 556 aa27.27■■□□□ 1.96
RAB40C-209ENST00000565511 RNF20Q5VTR2 975 aa27.27■■□□□ 1.96
RAB40C-209ENST00000565511 NLRX1Q86UT6 975 aa27.27■■□□□ 1.96
RAB40C-209ENST00000565511 DBF4BQ8NFT6 615 aa27.27■■□□□ 1.96
RAB40C-209ENST00000565511 LMBR1Q8WVP7 490 aa27.27■■□□□ 1.96
RAB40C-209ENST00000565511 ABHD14A-ACY1A0A1B0GW23 586 aa27.26■■□□□ 1.95
RAB40C-209ENST00000565511 GSTTP1A0A1W2PQM5 241 aa27.26■■□□□ 1.95
RAB40C-209ENST00000565511 LPXNO60711 386 aa27.26■■□□□ 1.95
RAB40C-209ENST00000565511 CDC27P30260 824 aa27.26■■□□□ 1.95
RAB40C-209ENST00000565511 FAM117BQ6P1L5 589 aa27.26■■□□□ 1.95
RAB40C-209ENST00000565511 DHX32Q7L7V1 743 aaKnown RBP27.26■■□□□ 1.95
RAB40C-209ENST00000565511 GJB5O95377 273 aa27.25■■□□□ 1.95
RAB40C-209ENST00000565511 TCF7P36402 384 aaPredicted RBP27.25■■□□□ 1.95
RAB40C-209ENST00000565511 RTN1Q16799 776 aa27.25■■□□□ 1.95
RAB40C-209ENST00000565511 MUC3AQ02505 3323 aa27.24■■□□□ 1.95
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