RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 SLC16A2P36021 539 aa10.64□□□□□ -0.71
VPS9D1-205ENST00000565452 CCDC96Q2M329 555 aa10.64□□□□□ -0.71
VPS9D1-205ENST00000565452 ZKSCAN2Q63HK3 967 aa10.64□□□□□ -0.71
VPS9D1-205ENST00000565452 ADGRD2Q7Z7M1 963 aa10.64□□□□□ -0.71
VPS9D1-205ENST00000565452 KIAA2013Q8IYS2 634 aa10.64□□□□□ -0.71
VPS9D1-205ENST00000565452 NSUN6Q8TEA1 469 aaKnown RBP10.64□□□□□ -0.71
VPS9D1-205ENST00000565452 POF1BQ8WVV4 589 aa10.64□□□□□ -0.71
VPS9D1-205ENST00000565452 NEK1Q96PY6 1258 aa10.64□□□□□ -0.71
VPS9D1-205ENST00000565452 NACAP1Q9BZK3 213 aa10.64□□□□□ -0.71
VPS9D1-205ENST00000565452 MTMR7Q9Y216 660 aa10.64□□□□□ -0.71
VPS9D1-205ENST00000565452 PTPRSQ13332 1948 aa10.64□□□□□ -0.71
VPS9D1-205ENST00000565452 EP300Q09472 2414 aaPredicted RBP10.64□□□□□ -0.71
VPS9D1-205ENST00000565452 WDR87Q6ZQQ6 2873 aa10.63□□□□□ -0.71
VPS9D1-205ENST00000565452 CHD8Q9HCK8 2581 aa10.63□□□□□ -0.71
VPS9D1-205ENST00000565452 EIF3JO75822 258 aaKnown RBP10.63□□□□□ -0.71
VPS9D1-205ENST00000565452 ITGB1P05556 798 aa10.63□□□□□ -0.71
VPS9D1-205ENST00000565452 ZNF286BP0CG31 522 aa10.63□□□□□ -0.71
VPS9D1-205ENST00000565452 MS4A1P11836 297 aa10.63□□□□□ -0.71
VPS9D1-205ENST00000565452 HIC1Q14526 733 aa10.63□□□□□ -0.71
VPS9D1-205ENST00000565452 TTBK2Q6IQ55 1244 aa10.63□□□□□ -0.71
VPS9D1-205ENST00000565452 CEP85Q6P2H3 762 aa10.63□□□□□ -0.71
VPS9D1-205ENST00000565452 KLHL23Q8NBE8 558 aa10.63□□□□□ -0.71
VPS9D1-205ENST00000565452 ZNF689Q96CS4 500 aaPredicted RBP10.63□□□□□ -0.71
VPS9D1-205ENST00000565452 CDCA3Q99618 268 aaPredicted RBP10.63□□□□□ -0.71
VPS9D1-205ENST00000565452 NCOR2Q9Y618 2525 aa10.63□□□□□ -0.71
VPS9D1-205ENST00000565452 TANC1Q9C0D5 1861 aa10.63□□□□□ -0.71
VPS9D1-205ENST00000565452 TSPY2A6NKD2 308 aa10.62□□□□□ -0.71
VPS9D1-205ENST00000565452 TREHO43280 583 aa10.62□□□□□ -0.71
VPS9D1-205ENST00000565452 GLP2RO95838 553 aa10.62□□□□□ -0.71
VPS9D1-205ENST00000565452 CTSHP09668 335 aa10.62□□□□□ -0.71
VPS9D1-205ENST00000565452 SDHBP21912 280 aa10.62□□□□□ -0.71
VPS9D1-205ENST00000565452 IFNL3Q8IZI9 196 aa10.62□□□□□ -0.71
VPS9D1-205ENST00000565452 ATP8B4Q8TF62 1192 aa10.62□□□□□ -0.71
VPS9D1-205ENST00000565452 RNPEPQ9H4A4 650 aa10.62□□□□□ -0.71
VPS9D1-205ENST00000565452 DLL3Q9NYJ7 618 aa10.62□□□□□ -0.71
VPS9D1-205ENST00000565452 MRVI1Q9Y6F6 885 aa10.62□□□□□ -0.71
VPS9D1-205ENST00000565452 PLXNA3P51805 1871 aa10.61□□□□□ -0.71
VPS9D1-205ENST00000565452 MYH8P13535 1937 aa10.61□□□□□ -0.71
VPS9D1-205ENST00000565452 H3BRB1 525 aa10.61□□□□□ -0.71
VPS9D1-205ENST00000565452 RBAK-RBAKDNI3L0D1 243 aa10.61□□□□□ -0.71
VPS9D1-205ENST00000565452 PER2O15055 1255 aa10.61□□□□□ -0.71
VPS9D1-205ENST00000565452 RAB11FIP3O75154 756 aa10.61□□□□□ -0.71
VPS9D1-205ENST00000565452 DGKIO75912 1065 aa10.61□□□□□ -0.71
VPS9D1-205ENST00000565452 BRD1O95696 1058 aa10.61□□□□□ -0.71
VPS9D1-205ENST00000565452 HOXD8P13378 290 aaPredicted RBP10.61□□□□□ -0.71
VPS9D1-205ENST00000565452 HOXB8P17481 243 aaPredicted RBP10.61□□□□□ -0.71
VPS9D1-205ENST00000565452 UBE3AQ05086 875 aa10.61□□□□□ -0.71
VPS9D1-205ENST00000565452 ANGPT1Q15389 498 aa10.61□□□□□ -0.71
VPS9D1-205ENST00000565452 FAM26DQ5JW98 314 aa10.61□□□□□ -0.71
VPS9D1-205ENST00000565452 MYSM1Q5VVJ2 828 aa10.61□□□□□ -0.71
VPS9D1-205ENST00000565452 PDE12Q6L8Q7 609 aaKnown RBP10.61□□□□□ -0.71
VPS9D1-205ENST00000565452 KCNV1Q6PIU1 500 aa10.61□□□□□ -0.71
VPS9D1-205ENST00000565452 TMEM184AQ6ZMB5 413 aa10.61□□□□□ -0.71
VPS9D1-205ENST00000565452 ITPRIPQ8IWB1 547 aa10.61□□□□□ -0.71
VPS9D1-205ENST00000565452 FTSJ3Q8IY81 847 aaKnown RBP10.61□□□□□ -0.71
VPS9D1-205ENST00000565452 CMTR2Q8IYT2 770 aaKnown RBP10.61□□□□□ -0.71
VPS9D1-205ENST00000565452 FLCNQ8NFG4 579 aa10.61□□□□□ -0.71
VPS9D1-205ENST00000565452 SPATA33Q96N06 139 aa10.61□□□□□ -0.71
VPS9D1-205ENST00000565452 TAAR1Q96RJ0 339 aa10.61□□□□□ -0.71
VPS9D1-205ENST00000565452 RMDN3Q96TC7 470 aa10.61□□□□□ -0.71
VPS9D1-205ENST00000565452 HINFPQ9BQA5 517 aa10.61□□□□□ -0.71
VPS9D1-205ENST00000565452 OSBPL7Q9BZF2 842 aa10.61□□□□□ -0.71
VPS9D1-205ENST00000565452 S1PR5Q9H228 398 aa10.61□□□□□ -0.71
VPS9D1-205ENST00000565452 TUT1Q9H6E5 874 aaKnown RBP10.61□□□□□ -0.71
VPS9D1-205ENST00000565452 GPCPD1Q9NPB8 672 aa10.61□□□□□ -0.71
VPS9D1-205ENST00000565452 TSHZ2Q9NRE2 1034 aa10.61□□□□□ -0.71
VPS9D1-205ENST00000565452 IL17RBQ9NRM6 502 aa10.61□□□□□ -0.71
VPS9D1-205ENST00000565452 RCAN3Q9UKA8 241 aa10.61□□□□□ -0.71
VPS9D1-205ENST00000565452 PLIN4Q96Q06 1357 aa10.61□□□□□ -0.71
VPS9D1-205ENST00000565452 WDR19Q8NEZ3 1342 aa10.6□□□□□ -0.71
VPS9D1-205ENST00000565452 PPFIA3O75145 1194 aa10.6□□□□□ -0.71
VPS9D1-205ENST00000565452 SMIM10L2AP0DMW4 78 aa10.6□□□□□ -0.71
VPS9D1-205ENST00000565452 SMIM10L2BP0DMW5 78 aa10.6□□□□□ -0.71
VPS9D1-205ENST00000565452 TECP42680 631 aa10.6□□□□□ -0.71
VPS9D1-205ENST00000565452 ST3GAL2Q16842 350 aa10.6□□□□□ -0.71
VPS9D1-205ENST00000565452 ARHGEF16Q5VV41 709 aa10.6□□□□□ -0.71
VPS9D1-205ENST00000565452 MCF2L2Q86YR7 1114 aa10.6□□□□□ -0.71
VPS9D1-205ENST00000565452 APPBP2Q92624 585 aa10.6□□□□□ -0.71
VPS9D1-205ENST00000565452 OSBP2Q969R2 916 aa10.6□□□□□ -0.71
VPS9D1-205ENST00000565452 RTP3Q9BQQ7 232 aa10.6□□□□□ -0.71
VPS9D1-205ENST00000565452 C16orf70Q9BSU1 422 aa10.6□□□□□ -0.71
VPS9D1-205ENST00000565452 RC3H2Q9HBD1 1191 aaKnown RBP10.6□□□□□ -0.71
VPS9D1-205ENST00000565452 PCDHB12Q9Y5F1 795 aa10.6□□□□□ -0.71
VPS9D1-205ENST00000565452 MRPL42Q9Y6G3 142 aaKnown RBP10.6□□□□□ -0.71
VPS9D1-205ENST00000565452 ZNF292O60281 2723 aa10.6□□□□□ -0.71
VPS9D1-205ENST00000565452 VPS13AQ96RL7 3174 aa10.6□□□□□ -0.71
VPS9D1-205ENST00000565452 ACACBO00763 2458 aa10.6□□□□□ -0.71
VPS9D1-205ENST00000565452 MICAL3Q7RTP6 2002 aa10.6□□□□□ -0.71
VPS9D1-205ENST00000565452 KMT2EQ8IZD2 1858 aa10.59□□□□□ -0.71
VPS9D1-205ENST00000565452 BAZ2AQ9UIF9 1905 aaKnown RBP10.59□□□□□ -0.71
VPS9D1-205ENST00000565452 RNF113AO15541 343 aaKnown RBP10.59□□□□□ -0.71
VPS9D1-205ENST00000565452 GPAA1O43292 621 aa10.59□□□□□ -0.71
VPS9D1-205ENST00000565452 ZFYP08048 801 aaPredicted RBP10.59□□□□□ -0.71
VPS9D1-205ENST00000565452 TGFB3P10600 412 aa10.59□□□□□ -0.71
VPS9D1-205ENST00000565452 SP100P23497 879 aaPredicted RBP10.59□□□□□ -0.71
VPS9D1-205ENST00000565452 PPARAQ07869 468 aa10.59□□□□□ -0.71
VPS9D1-205ENST00000565452 DUSP6Q16828 381 aa10.59□□□□□ -0.71
VPS9D1-205ENST00000565452 HSDL1Q3SXM5 330 aa10.59□□□□□ -0.71
VPS9D1-205ENST00000565452 CELF3Q5SZQ8 465 aaKnown RBP10.59□□□□□ -0.71
VPS9D1-205ENST00000565452 CES5AQ6NT32 575 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms