RNA–Protein interactions for RNA: ENST00000565224.5

SMG1-210, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-210ENST00000565224 GPCPD1Q9NPB8 672 aa8.02□□□□□ -1.13
SMG1-210ENST00000565224 BMP2KQ9NSY1 1161 aaPredicted RBP8.02□□□□□ -1.13
SMG1-210ENST00000565224 PANK4Q9NVE7 773 aa8.02□□□□□ -1.13
SMG1-210ENST00000565224 EHD2Q9NZN4 543 aa8.02□□□□□ -1.13
SMG1-210ENST00000565224 DDX25Q9UHL0 483 aaKnown RBP8.02□□□□□ -1.13
SMG1-210ENST00000565224 KDM3AQ9Y4C1 1321 aa8.01□□□□□ -1.13
SMG1-210ENST00000565224 BUB1O43683 1085 aa8.01□□□□□ -1.13
SMG1-210ENST00000565224 MARCH6O60337 910 aa8.01□□□□□ -1.13
SMG1-210ENST00000565224 NOL4O94818 638 aa8.01□□□□□ -1.13
SMG1-210ENST00000565224 RFC4P35249 363 aa8.01□□□□□ -1.13
SMG1-210ENST00000565224 MRPS25P82663 173 aaKnown RBP8.01□□□□□ -1.13
SMG1-210ENST00000565224 PPFIA1Q13136 1202 aa8.01□□□□□ -1.13
SMG1-210ENST00000565224 NNTQ13423 1086 aa8.01□□□□□ -1.13
SMG1-210ENST00000565224 UBE2SQ16763 222 aa8.01□□□□□ -1.13
SMG1-210ENST00000565224 FAM83BQ5T0W9 1011 aa8.01□□□□□ -1.13
SMG1-210ENST00000565224 ALS2CLQ60I27 953 aa8.01□□□□□ -1.13
SMG1-210ENST00000565224 GBP6Q6ZN66 633 aa8.01□□□□□ -1.13
SMG1-210ENST00000565224 DEFB132Q7Z7B7 95 aa8.01□□□□□ -1.13
SMG1-210ENST00000565224 TBC1D22AQ8WUA7 517 aa8.01□□□□□ -1.13
SMG1-210ENST00000565224 RPGRQ92834 1020 aaKnown RBP8.01□□□□□ -1.13
SMG1-210ENST00000565224 HAS1Q92839 578 aa8.01□□□□□ -1.13
SMG1-210ENST00000565224 NLRC4Q9NPP4 1024 aa8.01□□□□□ -1.13
SMG1-210ENST00000565224 RBM12Q9NTZ6 932 aaKnown RBP8.01□□□□□ -1.13
SMG1-210ENST00000565224 GGA1Q9UJY5 639 aa8.01□□□□□ -1.13
SMG1-210ENST00000565224 IGKV6D-41A0A0C4DH26 115 aa8□□□□□ -1.13
SMG1-210ENST00000565224 TLR2O60603 784 aa8□□□□□ -1.13
SMG1-210ENST00000565224 HSF2BPO75031 334 aa8□□□□□ -1.13
SMG1-210ENST00000565224 TRIM37O94972 964 aa8□□□□□ -1.13
SMG1-210ENST00000565224 EPB41P11171 864 aaKnown RBP8□□□□□ -1.13
SMG1-210ENST00000565224 AKR1B1P15121 316 aa8□□□□□ -1.13
SMG1-210ENST00000565224 GCFC2P16383 781 aaKnown RBP8□□□□□ -1.13
SMG1-210ENST00000565224 CLK2P49760 499 aaKnown RBP8□□□□□ -1.13
SMG1-210ENST00000565224 CORO7P57737 925 aa8□□□□□ -1.13
SMG1-210ENST00000565224 ZNF543Q08ER8 600 aa8□□□□□ -1.13
SMG1-210ENST00000565224 HYIQ5T013 277 aa8□□□□□ -1.13
SMG1-210ENST00000565224 PPP1R3FQ6ZSY5 799 aaPredicted RBP8□□□□□ -1.13
SMG1-210ENST00000565224 CUL5Q93034 780 aa8□□□□□ -1.13
SMG1-210ENST00000565224 RUFY1Q96T51 708 aa8□□□□□ -1.13
SMG1-210ENST00000565224 NT5C3AQ9H0P0 336 aa8□□□□□ -1.13
SMG1-210ENST00000565224 PLEKHA4Q9H4M7 779 aa8□□□□□ -1.13
SMG1-210ENST00000565224 JMJD4Q9H9V9 463 aa8□□□□□ -1.13
SMG1-210ENST00000565224 ATP6V0A2Q9Y487 856 aa8□□□□□ -1.13
SMG1-210ENST00000565224 NHSQ6T4R5 1651 aa8□□□□□ -1.13
SMG1-210ENST00000565224 PPP1R11O60927 126 aaPredicted RBP8□□□□□ -1.13
SMG1-210ENST00000565224 PALMO75781 387 aa8□□□□□ -1.13
SMG1-210ENST00000565224 TTLL1O95922 423 aa8□□□□□ -1.13
SMG1-210ENST00000565224 SSBP05455 408 aaKnown RBP eCLIP8□□□□□ -1.13
SMG1-210ENST00000565224 MAGEA9P43362 315 aa8□□□□□ -1.13
SMG1-210ENST00000565224 MRPL12P52815 198 aaKnown RBP8□□□□□ -1.13
SMG1-210ENST00000565224 MARSP56192 900 aaKnown RBP8□□□□□ -1.13
SMG1-210ENST00000565224 EIF6P56537 245 aaKnown RBP8□□□□□ -1.13
SMG1-210ENST00000565224 POLR2FP61218 127 aaKnown RBP8□□□□□ -1.13
SMG1-210ENST00000565224 GABPAQ06546 454 aa8□□□□□ -1.13
SMG1-210ENST00000565224 SF3B2Q13435 895 aaKnown RBP8□□□□□ -1.13
SMG1-210ENST00000565224 NAB2Q15742 525 aa8□□□□□ -1.13
SMG1-210ENST00000565224 DNAJC21Q5F1R6 531 aaKnown RBP8□□□□□ -1.13
SMG1-210ENST00000565224 TRAPPC3LQ5T215 181 aa8□□□□□ -1.13
SMG1-210ENST00000565224 DPP8Q6V1X1 898 aaPredicted RBP8□□□□□ -1.13
SMG1-210ENST00000565224 TMC4Q7Z404 712 aa8□□□□□ -1.13
SMG1-210ENST00000565224 TRIM59Q8IWR1 403 aa8□□□□□ -1.13
SMG1-210ENST00000565224 CCDC65Q8IXS2 484 aa8□□□□□ -1.13
SMG1-210ENST00000565224 IFT20Q8IY31 132 aa8□□□□□ -1.13
SMG1-210ENST00000565224 ADGRF4Q8IZF3 695 aa8□□□□□ -1.13
SMG1-210ENST00000565224 TSEN2Q8NCE0 465 aaKnown RBP8□□□□□ -1.13
SMG1-210ENST00000565224 BBXQ8WY36 941 aaPredicted RBP8□□□□□ -1.13
SMG1-210ENST00000565224 NAP1L4Q99733 375 aaKnown RBP8□□□□□ -1.13
SMG1-210ENST00000565224 DAGLAQ9Y4D2 1042 aa8□□□□□ -1.13
SMG1-210ENST00000565224 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8□□□□□ -1.13
SMG1-210ENST00000565224 CDK5RAP2Q96SN8 1893 aa7.99□□□□□ -1.13
SMG1-210ENST00000565224 GRID2IPA4D2P6 1211 aa7.99□□□□□ -1.13
SMG1-210ENST00000565224 SLC26A4O43511 780 aa7.99□□□□□ -1.13
SMG1-210ENST00000565224 PLA2G4BP0C869 781 aa7.99□□□□□ -1.13
SMG1-210ENST00000565224 IRAK1P51617 712 aa7.99□□□□□ -1.13
SMG1-210ENST00000565224 PICALMQ13492 652 aa7.99□□□□□ -1.13
SMG1-210ENST00000565224 RAPGEF1Q13905 1077 aa7.99□□□□□ -1.13
SMG1-210ENST00000565224 SLC18A3Q16572 532 aa7.99□□□□□ -1.13
SMG1-210ENST00000565224 PRR5LQ6MZQ0 368 aa7.99□□□□□ -1.13
SMG1-210ENST00000565224 TBC1D5Q92609 795 aa7.99□□□□□ -1.13
SMG1-210ENST00000565224 MS4A14Q96JA4 679 aa7.99□□□□□ -1.13
SMG1-210ENST00000565224 CAPS2Q9BXY5 557 aa7.99□□□□□ -1.13
SMG1-210ENST00000565224 FGFBP2Q9BYJ0 223 aa7.99□□□□□ -1.13
SMG1-210ENST00000565224 GDF3Q9NR23 364 aa7.99□□□□□ -1.13
SMG1-210ENST00000565224 TBC1D7Q9P0N9 293 aa7.99□□□□□ -1.13
SMG1-210ENST00000565224 PCDHA12Q9UN75 941 aa7.99□□□□□ -1.13
SMG1-210ENST00000565224 PCDHGC5Q9Y5F6 944 aa7.99□□□□□ -1.13
SMG1-210ENST00000565224 PCDHA2Q9Y5H9 948 aa7.99□□□□□ -1.13
SMG1-210ENST00000565224 E9PMD0 336 aa7.99□□□□□ -1.13
SMG1-210ENST00000565224 ZBTB5O15062 677 aa7.99□□□□□ -1.13
SMG1-210ENST00000565224 CLSTN1O94985 981 aa7.99□□□□□ -1.13
SMG1-210ENST00000565224 PAK2Q13177 524 aa7.99□□□□□ -1.13
SMG1-210ENST00000565224 CRY2Q49AN0 593 aa7.99□□□□□ -1.13
SMG1-210ENST00000565224 MEI1Q5TIA1 1274 aa7.99□□□□□ -1.13
SMG1-210ENST00000565224 PPP4R3CPQ6ZMV5 832 aa7.99□□□□□ -1.13
SMG1-210ENST00000565224 GPBP1Q86WP2 473 aa7.99□□□□□ -1.13
SMG1-210ENST00000565224 CLEC10AQ8IUN9 316 aa7.99□□□□□ -1.13
SMG1-210ENST00000565224 NELFCDQ8IXH7 590 aa7.99□□□□□ -1.13
SMG1-210ENST00000565224 ZC3H3Q8IXZ2 948 aaKnown RBP7.99□□□□□ -1.13
SMG1-210ENST00000565224 GJA10Q969M2 543 aa7.99□□□□□ -1.13
SMG1-210ENST00000565224 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.99□□□□□ -1.13
SMG1-210ENST00000565224 FAM107BQ9H098 131 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms