RNA–Protein interactions for RNA: ENST00000564834.1

LINC01003-201, Transcript of long intergenic non-protein coding RNA 1003, humanhuman

BASIC

Gene LINC01003, Length 1,764 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01003-201ENST00000564834 COBLO75128 1261 aa28.13■■■□□ 2.09
LINC01003-201ENST00000564834 SSBP05455 408 aaKnown RBP eCLIP28.13■■■□□ 2.09
LINC01003-201ENST00000564834 IDEP14735 1019 aa28.13■■■□□ 2.09
LINC01003-201ENST00000564834 ITGB5P18084 799 aa28.13■■■□□ 2.09
LINC01003-201ENST00000564834 SLC12A3P55017 1021 aa28.13■■■□□ 2.09
LINC01003-201ENST00000564834 TMEM132BQ14DG7 1078 aa28.13■■■□□ 2.09
LINC01003-201ENST00000564834 RIT2Q99578 217 aa28.13■■■□□ 2.09
LINC01003-201ENST00000564834 TEX13BQ9BXU2 312 aa28.13■■■□□ 2.09
LINC01003-201ENST00000564834 LOXHD1Q8IVV2 1947 aa28.12■■■□□ 2.09
LINC01003-201ENST00000564834 TRIM49BA6NDI0 452 aa28.12■■■□□ 2.09
LINC01003-201ENST00000564834 IPO5O00410 1097 aaKnown RBP28.12■■■□□ 2.09
LINC01003-201ENST00000564834 CCNE1P24864 410 aa28.12■■■□□ 2.09
LINC01003-201ENST00000564834 PMS1P54277 932 aaKnown RBP28.12■■■□□ 2.09
LINC01003-201ENST00000564834 ARID5BQ14865 1188 aa28.12■■■□□ 2.09
LINC01003-201ENST00000564834 NR1I3Q14994 352 aa28.12■■■□□ 2.09
LINC01003-201ENST00000564834 TKFCQ3LXA3 575 aa28.12■■■□□ 2.09
LINC01003-201ENST00000564834 TTI2Q6NXR4 508 aa28.12■■■□□ 2.09
LINC01003-201ENST00000564834 NSMFQ6X4W1 530 aa28.12■■■□□ 2.09
LINC01003-201ENST00000564834 ANKRD13AQ8IZ07 590 aa28.12■■■□□ 2.09
LINC01003-201ENST00000564834 TAAR1Q96RJ0 339 aa28.12■■■□□ 2.09
LINC01003-201ENST00000564834 TUFT1Q9NNX1 390 aa28.12■■■□□ 2.09
LINC01003-201ENST00000564834 UBIAD1Q9Y5Z9 338 aa28.12■■■□□ 2.09
LINC01003-201ENST00000564834 GRIN3BO60391 1043 aa28.11■■■□□ 2.09
LINC01003-201ENST00000564834 PGM5Q15124 567 aa28.11■■■□□ 2.09
LINC01003-201ENST00000564834 GPBP1Q86WP2 473 aa28.11■■■□□ 2.09
LINC01003-201ENST00000564834 P2RX5Q93086 422 aa28.11■■■□□ 2.09
LINC01003-201ENST00000564834 ZFP91Q96JP5 570 aaPredicted RBP28.11■■■□□ 2.09
LINC01003-201ENST00000564834 HSD17B14Q9BPX1 270 aa28.11■■■□□ 2.09
LINC01003-201ENST00000564834 TEKT3Q9BXF9 490 aa28.11■■■□□ 2.09
LINC01003-201ENST00000564834 MAF1Q9H063 256 aa28.11■■■□□ 2.09
LINC01003-201ENST00000564834 SLC39A2Q9NP94 309 aa28.11■■■□□ 2.09
LINC01003-201ENST00000564834 ADD3Q9UEY8 706 aaKnown RBP28.11■■■□□ 2.09
LINC01003-201ENST00000564834 LIMA1Q9UHB6 759 aaKnown RBP28.11■■■□□ 2.09
LINC01003-201ENST00000564834 A0A0G2JMZ2 1700 aa28.11■■■□□ 2.09
LINC01003-201ENST00000564834 IQCA1LA6NCM1 817 aa28.11■■■□□ 2.09
LINC01003-201ENST00000564834 CYP11B2P19099 503 aa28.11■■■□□ 2.09
LINC01003-201ENST00000564834 PPATQ06203 517 aa28.11■■■□□ 2.09
LINC01003-201ENST00000564834 B3GNT9Q6UX72 402 aa28.11■■■□□ 2.09
LINC01003-201ENST00000564834 SYT2Q8N9I0 419 aaPredicted RBP28.11■■■□□ 2.09
LINC01003-201ENST00000564834 ANKRD20A12PQ8NF67 263 aa28.11■■■□□ 2.09
LINC01003-201ENST00000564834 CNKSR2Q8WXI2 1034 aa28.11■■■□□ 2.09
LINC01003-201ENST00000564834 TRIM47Q96LD4 638 aa28.11■■■□□ 2.09
LINC01003-201ENST00000564834 RMDN3Q96TC7 470 aa28.11■■■□□ 2.09
LINC01003-201ENST00000564834 PXMP2Q9NR77 195 aa28.11■■■□□ 2.09
LINC01003-201ENST00000564834 KCNH7Q9NS40 1196 aa28.11■■■□□ 2.09
LINC01003-201ENST00000564834 LRRC10BA6NIK2 292 aa28.1■■■□□ 2.09
LINC01003-201ENST00000564834 EIF2AK2P19525 551 aaKnown RBP28.1■■■□□ 2.09
LINC01003-201ENST00000564834 MUTP22033 750 aa28.1■■■□□ 2.09
LINC01003-201ENST00000564834 MRPS9P82933 396 aaKnown RBP28.1■■■□□ 2.09
LINC01003-201ENST00000564834 CYP4A11Q02928 519 aa28.1■■■□□ 2.09
LINC01003-201ENST00000564834 COASYQ13057 564 aa28.1■■■□□ 2.09
LINC01003-201ENST00000564834 FILIP1LQ4L180 1135 aa28.1■■■□□ 2.09
LINC01003-201ENST00000564834 ERO1BQ86YB8 467 aa28.1■■■□□ 2.09
LINC01003-201ENST00000564834 NOC3LQ8WTT2 800 aaKnown RBP28.1■■■□□ 2.09
LINC01003-201ENST00000564834 HPS3Q969F9 1004 aa28.1■■■□□ 2.09
LINC01003-201ENST00000564834 TAF1DQ9H5J8 278 aaPredicted RBP28.1■■■□□ 2.09
LINC01003-201ENST00000564834 THAP9Q9H5L6 903 aa28.1■■■□□ 2.09
LINC01003-201ENST00000564834 PSMC6P62333 389 aa28.09■■■□□ 2.09
LINC01003-201ENST00000564834 TCP11X2Q5H9J9 407 aa28.09■■■□□ 2.09
LINC01003-201ENST00000564834 CCDC65Q8IXS2 484 aa28.09■■■□□ 2.09
LINC01003-201ENST00000564834 GUF1Q8N442 669 aaKnown RBP28.09■■■□□ 2.09
LINC01003-201ENST00000564834 PDCD2LQ9BRP1 358 aa28.09■■■□□ 2.09
LINC01003-201ENST00000564834 ELP3Q9H9T3 547 aa28.09■■■□□ 2.09
LINC01003-201ENST00000564834 JADE2Q9NQC1 790 aa28.09■■■□□ 2.09
LINC01003-201ENST00000564834 PANK4Q9NVE7 773 aa28.09■■■□□ 2.09
LINC01003-201ENST00000564834 KCNJ18B7U540 433 aa28.09■■■□□ 2.09
LINC01003-201ENST00000564834 CHMP2AO43633 222 aa28.09■■■□□ 2.09
LINC01003-201ENST00000564834 SFPQP23246 707 aaKnown RBP eCLIP28.09■■■□□ 2.09
LINC01003-201ENST00000564834 BAATQ14032 418 aaPredicted RBP28.09■■■□□ 2.09
LINC01003-201ENST00000564834 KCNJ12Q14500 433 aa28.09■■■□□ 2.09
LINC01003-201ENST00000564834 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.09■■■□□ 2.09
LINC01003-201ENST00000564834 A0A0G2JLL6 359 aaPredicted RBP28.08■■■□□ 2.09
LINC01003-201ENST00000564834 KRT31Q15323 416 aa28.08■■■□□ 2.09
LINC01003-201ENST00000564834 TREML2Q5T2D2 321 aa28.08■■■□□ 2.09
LINC01003-201ENST00000564834 ARHGEF16Q5VV41 709 aa28.08■■■□□ 2.09
LINC01003-201ENST00000564834 SPECC1LQ69YQ0 1117 aa28.08■■■□□ 2.09
LINC01003-201ENST00000564834 ARMCX5Q6P1M9 558 aa28.08■■■□□ 2.09
LINC01003-201ENST00000564834 XRRA1Q6P2D8 792 aa28.08■■■□□ 2.09
LINC01003-201ENST00000564834 PRRT2Q7Z6L0 340 aaPredicted RBP28.08■■■□□ 2.09
LINC01003-201ENST00000564834 PROCA1Q8NCQ7 364 aaPredicted RBP28.08■■■□□ 2.09
LINC01003-201ENST00000564834 UNC45AQ9H3U1 944 aa28.08■■■□□ 2.09
LINC01003-201ENST00000564834 ACAD9Q9H845 621 aa28.08■■■□□ 2.09
LINC01003-201ENST00000564834 RGL1Q9NZL6 768 aa28.08■■■□□ 2.09
LINC01003-201ENST00000564834 FRMD3A2A2Y4 597 aa28.07■■■□□ 2.08
LINC01003-201ENST00000564834 SPDYE5A6NIY4 337 aa28.07■■■□□ 2.08
LINC01003-201ENST00000564834 IRF6O14896 467 aa28.07■■■□□ 2.08
LINC01003-201ENST00000564834 EYA4O95677 639 aa28.07■■■□□ 2.08
LINC01003-201ENST00000564834 PABPC4Q13310 644 aaKnown RBP eCLIP28.07■■■□□ 2.08
LINC01003-201ENST00000564834 MTMR1Q13613 665 aa28.07■■■□□ 2.08
LINC01003-201ENST00000564834 NOLC1Q14978 699 aaKnown RBP eCLIP28.07■■■□□ 2.08
LINC01003-201ENST00000564834 ARSHQ5FYA8 562 aa28.07■■■□□ 2.08
LINC01003-201ENST00000564834 CENPPQ6IPU0 288 aa28.07■■■□□ 2.08
LINC01003-201ENST00000564834 SPTLC3Q9NUV7 552 aa28.07■■■□□ 2.08
LINC01003-201ENST00000564834 CXCL11O14625 94 aa28.06■■■□□ 2.08
LINC01003-201ENST00000564834 SLITRK3O94933 977 aa28.06■■■□□ 2.08
LINC01003-201ENST00000564834 CCZ1BP86790 482 aa28.06■■■□□ 2.08
LINC01003-201ENST00000564834 CCZ1P86791 482 aaPredicted RBP28.06■■■□□ 2.08
LINC01003-201ENST00000564834 TTLL12Q14166 644 aaPredicted RBP28.06■■■□□ 2.08
LINC01003-201ENST00000564834 EPHA7Q15375 998 aa28.06■■■□□ 2.08
LINC01003-201ENST00000564834 EAPPQ56P03 285 aaPredicted RBP28.06■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 115.8 ms