RNA–Protein interactions for RNA: ENST00000564747.1

GTF3C1-205, Transcript of general transcription factor IIIC subunit 1, humanhuman

Gene GTF3C1, Length 2,798 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-205ENST00000564747 ARID5AQ03989 594 aa17.08■□□□□ 0.32
GTF3C1-205ENST00000564747 ENOX2Q16206 610 aaKnown RBP17.08■□□□□ 0.32
GTF3C1-205ENST00000564747 TSEN2Q8NCE0 465 aaKnown RBP17.08■□□□□ 0.32
GTF3C1-205ENST00000564747 C8orf37Q96NL8 207 aa17.08■□□□□ 0.32
GTF3C1-205ENST00000564747 USP17L10C9JJH3 530 aa17.07■□□□□ 0.32
GTF3C1-205ENST00000564747 RBAK-RBAKDNI3L0D1 243 aa17.07■□□□□ 0.32
GTF3C1-205ENST00000564747 KCTD1Q719H9 257 aa17.07■□□□□ 0.32
GTF3C1-205ENST00000564747 RNF10Q8N5U6 811 aaKnown RBP17.07■□□□□ 0.32
GTF3C1-205ENST00000564747 TBC1D16Q8TBP0 767 aa17.07■□□□□ 0.32
GTF3C1-205ENST00000564747 CUL5Q93034 780 aa17.07■□□□□ 0.32
GTF3C1-205ENST00000564747 C6orf229H3BNL8 230 aa17.07■□□□□ 0.32
GTF3C1-205ENST00000564747 PPFIA4O75335 1185 aa17.07■□□□□ 0.32
GTF3C1-205ENST00000564747 TTLL1O95922 423 aa17.07■□□□□ 0.32
GTF3C1-205ENST00000564747 SERPING1P05155 500 aa17.07■□□□□ 0.32
GTF3C1-205ENST00000564747 SLURP2P0DP57 97 aa17.07■□□□□ 0.32
GTF3C1-205ENST00000564747 C8orf74Q6P047 294 aa17.07■□□□□ 0.32
GTF3C1-205ENST00000564747 TBC1D5Q92609 795 aa17.07■□□□□ 0.32
GTF3C1-205ENST00000564747 PSTPIP2Q9H939 334 aa17.07■□□□□ 0.32
GTF3C1-205ENST00000564747 BMP2KQ9NSY1 1161 aaPredicted RBP17.07■□□□□ 0.32
GTF3C1-205ENST00000564747 PCDHA2Q9Y5H9 948 aa17.07■□□□□ 0.32
GTF3C1-205ENST00000564747 PLIN4Q96Q06 1357 aa17.07■□□□□ 0.32
GTF3C1-205ENST00000564747 BTAF1O14981 1849 aa17.07■□□□□ 0.32
GTF3C1-205ENST00000564747 PALMO75781 387 aa17.06■□□□□ 0.32
GTF3C1-205ENST00000564747 FTCDO95954 541 aa17.06■□□□□ 0.32
GTF3C1-205ENST00000564747 HERC4Q5GLZ8 1057 aaPredicted RBP17.06■□□□□ 0.32
GTF3C1-205ENST00000564747 FOXR2Q6PJQ5 311 aa17.06■□□□□ 0.32
GTF3C1-205ENST00000564747 NGLY1Q96IV0 654 aa17.06■□□□□ 0.32
GTF3C1-205ENST00000564747 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.06■□□□□ 0.32
GTF3C1-205ENST00000564747 POTEB3A0JP26 581 aa17.06■□□□□ 0.32
GTF3C1-205ENST00000564747 POTECB2RU33 542 aa17.06■□□□□ 0.32
GTF3C1-205ENST00000564747 KLRC1P26715 233 aa17.06■□□□□ 0.32
GTF3C1-205ENST00000564747 MAGEA9P43362 315 aa17.06■□□□□ 0.32
GTF3C1-205ENST00000564747 MRPL12P52815 198 aaKnown RBP17.06■□□□□ 0.32
GTF3C1-205ENST00000564747 EPHB4P54760 987 aa17.06■□□□□ 0.32
GTF3C1-205ENST00000564747 CFAP221Q4G0U5 840 aa17.06■□□□□ 0.32
GTF3C1-205ENST00000564747 POTEBQ6S5H4 581 aa17.06■□□□□ 0.32
GTF3C1-205ENST00000564747 TRIM59Q8IWR1 403 aa17.06■□□□□ 0.32
GTF3C1-205ENST00000564747 TBC1D22AQ8WUA7 517 aa17.06■□□□□ 0.32
GTF3C1-205ENST00000564747 RUBCNQ92622 972 aa17.06■□□□□ 0.32
GTF3C1-205ENST00000564747 ATP6V0A2Q9Y487 856 aa17.06■□□□□ 0.32
GTF3C1-205ENST00000564747 USP17L15C9J2P7 530 aa17.06■□□□□ 0.32
GTF3C1-205ENST00000564747 USP17L13C9JLJ4 530 aa17.06■□□□□ 0.32
GTF3C1-205ENST00000564747 USP17L11C9JVI0 530 aa17.06■□□□□ 0.32
GTF3C1-205ENST00000564747 USP17L18D6R9N7 530 aa17.06■□□□□ 0.32
GTF3C1-205ENST00000564747 USP17L22D6RA61 530 aa17.06■□□□□ 0.32
GTF3C1-205ENST00000564747 USP17L17D6RBQ6 530 aa17.06■□□□□ 0.32
GTF3C1-205ENST00000564747 USP17L19D6RCP7 530 aa17.06■□□□□ 0.32
GTF3C1-205ENST00000564747 USP17L20D6RJB6 530 aa17.06■□□□□ 0.32
GTF3C1-205ENST00000564747 GLI1P08151 1106 aa17.06■□□□□ 0.32
GTF3C1-205ENST00000564747 PLA2G4BP0C869 781 aa17.06■□□□□ 0.32
GTF3C1-205ENST00000564747 USP17L24Q0WX57 530 aa17.06■□□□□ 0.32
GTF3C1-205ENST00000564747 SEPT2Q15019 361 aa17.06■□□□□ 0.32
GTF3C1-205ENST00000564747 CRY2Q49AN0 593 aa17.06■□□□□ 0.32
GTF3C1-205ENST00000564747 USP17L6PQ6QN14 398 aa17.06■□□□□ 0.32
GTF3C1-205ENST00000564747 SCFD1Q8WVM8 642 aa17.06■□□□□ 0.32
GTF3C1-205ENST00000564747 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.06■□□□□ 0.32
GTF3C1-205ENST00000564747 EHD4Q9H223 541 aa17.06■□□□□ 0.32
GTF3C1-205ENST00000564747 PACSIN2Q9UNF0 486 aaPredicted RBP17.06■□□□□ 0.32
GTF3C1-205ENST00000564747 MYH7BA7E2Y1 1941 aa17.05■□□□□ 0.32
GTF3C1-205ENST00000564747 A0A087X0T9 212 aa17.05■□□□□ 0.32
GTF3C1-205ENST00000564747 ZSCAN5CA6NGD5 496 aaPredicted RBP17.05■□□□□ 0.32
GTF3C1-205ENST00000564747 SHOX2O60902 331 aaPredicted RBP17.05■□□□□ 0.32
GTF3C1-205ENST00000564747 FAM228BP0C875 321 aa17.05■□□□□ 0.32
GTF3C1-205ENST00000564747 RAPGEF1Q13905 1077 aa17.05■□□□□ 0.32
GTF3C1-205ENST00000564747 VPS72Q15906 364 aa17.05■□□□□ 0.32
GTF3C1-205ENST00000564747 PPP1R18Q6NYC8 613 aa17.05■□□□□ 0.32
GTF3C1-205ENST00000564747 GPBP1Q86WP2 473 aa17.05■□□□□ 0.32
GTF3C1-205ENST00000564747 SYN2Q92777 582 aaPredicted RBP17.05■□□□□ 0.32
GTF3C1-205ENST00000564747 CEP63Q96MT8 703 aa17.05■□□□□ 0.32
GTF3C1-205ENST00000564747 SH3GL2Q99962 352 aa17.05■□□□□ 0.32
GTF3C1-205ENST00000564747 PACSIN1Q9BY11 444 aa17.05■□□□□ 0.32
GTF3C1-205ENST00000564747 ADAMTS1Q9UHI8 967 aa17.05■□□□□ 0.32
GTF3C1-205ENST00000564747 RIMBP2O15034 1052 aa17.05■□□□□ 0.32
GTF3C1-205ENST00000564747 IRAK1P51617 712 aa17.05■□□□□ 0.32
GTF3C1-205ENST00000564747 NAB2Q15742 525 aa17.05■□□□□ 0.32
GTF3C1-205ENST00000564747 EMBQ6PCB8 327 aa17.05■□□□□ 0.32
GTF3C1-205ENST00000564747 CCDC65Q8IXS2 484 aa17.05■□□□□ 0.32
GTF3C1-205ENST00000564747 FAM133AQ8N9E0 248 aa17.05■□□□□ 0.32
GTF3C1-205ENST00000564747 CERKQ8TCT0 537 aa17.05■□□□□ 0.32
GTF3C1-205ENST00000564747 ARL8AQ96BM9 186 aa17.05■□□□□ 0.32
GTF3C1-205ENST00000564747 NUCKS1Q9H1E3 243 aaKnown RBP17.05■□□□□ 0.32
GTF3C1-205ENST00000564747 KCTD10Q9H3F6 313 aa17.05■□□□□ 0.32
GTF3C1-205ENST00000564747 EMILIN3Q9NT22 766 aa17.05■□□□□ 0.32
GTF3C1-205ENST00000564747 SERPINB13Q9UIV8 391 aa17.05■□□□□ 0.32
GTF3C1-205ENST00000564747 ESYT3A0FGR9 886 aa17.04■□□□□ 0.32
GTF3C1-205ENST00000564747 ZBTB5O15062 677 aa17.04■□□□□ 0.32
GTF3C1-205ENST00000564747 HOXA7P31268 230 aaPredicted RBP17.04■□□□□ 0.32
GTF3C1-205ENST00000564747 STAT3P40763 770 aa17.04■□□□□ 0.32
GTF3C1-205ENST00000564747 CARSP49589 748 aaKnown RBP17.04■□□□□ 0.32
GTF3C1-205ENST00000564747 RNASE9P60153 205 aaKnown RBP17.04■□□□□ 0.32
GTF3C1-205ENST00000564747 ADAM9Q13443 819 aa17.04■□□□□ 0.32
GTF3C1-205ENST00000564747 HYIQ5T013 277 aa17.04■□□□□ 0.32
GTF3C1-205ENST00000564747 ARHGAP27Q6ZUM4 889 aa17.04■□□□□ 0.32
GTF3C1-205ENST00000564747 PLCD3Q8N3E9 789 aa17.04■□□□□ 0.32
GTF3C1-205ENST00000564747 RBM17Q96I25 401 aaKnown RBP17.04■□□□□ 0.32
GTF3C1-205ENST00000564747 NT5C3AQ9H0P0 336 aa17.04■□□□□ 0.32
GTF3C1-205ENST00000564747 ZHX3Q9H4I2 956 aa17.04■□□□□ 0.32
GTF3C1-205ENST00000564747 MPHOSPH10O00566 681 aaKnown RBP17.04■□□□□ 0.32
GTF3C1-205ENST00000564747 NOP2P46087 812 aaKnown RBP17.04■□□□□ 0.32
GTF3C1-205ENST00000564747 SLC18A3Q16572 532 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms