RNA–Protein interactions for RNA: ENST00000564678.1

HERPUD1-209, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 2,199 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-209ENST00000564678 PP2D1A8MPX8 630 aa8.11□□□□□ -1.11
HERPUD1-209ENST00000564678 TEX33O43247 280 aa8.11□□□□□ -1.11
HERPUD1-209ENST00000564678 PLCG1P19174 1290 aa8.11□□□□□ -1.11
HERPUD1-209ENST00000564678 EEF1GP26641 437 aaKnown RBP8.11□□□□□ -1.11
HERPUD1-209ENST00000564678 TECP42680 631 aa8.11□□□□□ -1.11
HERPUD1-209ENST00000564678 SLC1A4P43007 532 aa8.11□□□□□ -1.11
HERPUD1-209ENST00000564678 USP11P51784 963 aa8.11□□□□□ -1.11
HERPUD1-209ENST00000564678 PRSS12P56730 875 aa8.11□□□□□ -1.11
HERPUD1-209ENST00000564678 TBX4P57082 545 aa8.11□□□□□ -1.11
HERPUD1-209ENST00000564678 ARID5AQ03989 594 aa8.11□□□□□ -1.11
HERPUD1-209ENST00000564678 CCDC96Q2M329 555 aa8.11□□□□□ -1.11
HERPUD1-209ENST00000564678 CNNM4Q6P4Q7 775 aa8.11□□□□□ -1.11
HERPUD1-209ENST00000564678 CNGA4Q8IV77 575 aa8.11□□□□□ -1.11
HERPUD1-209ENST00000564678 FMNL3Q8IVF7 1028 aa8.11□□□□□ -1.11
HERPUD1-209ENST00000564678 ZFPM1Q8IX07 1006 aa8.11□□□□□ -1.11
HERPUD1-209ENST00000564678 GMCL1P1Q8NEA9 526 aa8.11□□□□□ -1.11
HERPUD1-209ENST00000564678 BRINP2Q9C0B6 783 aa8.11□□□□□ -1.11
HERPUD1-209ENST00000564678 VPS33BQ9H267 617 aa8.11□□□□□ -1.11
HERPUD1-209ENST00000564678 THAP9Q9H5L6 903 aa8.11□□□□□ -1.11
HERPUD1-209ENST00000564678 PSTPIP2Q9H939 334 aa8.11□□□□□ -1.11
HERPUD1-209ENST00000564678 STK32BQ9NY57 414 aa8.11□□□□□ -1.11
HERPUD1-209ENST00000564678 DDX56Q9NY93 547 aaKnown RBP8.11□□□□□ -1.11
HERPUD1-209ENST00000564678 LRWD1Q9UFC0 647 aa8.11□□□□□ -1.11
HERPUD1-209ENST00000564678 INPP5FQ9Y2H2 1132 aa8.11□□□□□ -1.11
HERPUD1-209ENST00000564678 TNS1Q9HBL0 1735 aaKnown RBP8.1□□□□□ -1.11
HERPUD1-209ENST00000564678 SCN9AQ15858 1988 aa8.1□□□□□ -1.11
HERPUD1-209ENST00000564678 PVALEFA0A1B0GWK0 134 aa8.1□□□□□ -1.11
HERPUD1-209ENST00000564678 BICDL2A1A5D9 508 aa8.1□□□□□ -1.11
HERPUD1-209ENST00000564678 N4BP3O15049 544 aa8.1□□□□□ -1.11
HERPUD1-209ENST00000564678 MAFGO15525 162 aa8.1□□□□□ -1.11
HERPUD1-209ENST00000564678 EEF2P13639 858 aaKnown RBP8.1□□□□□ -1.11
HERPUD1-209ENST00000564678 MAPK8P45983 427 aa8.1□□□□□ -1.11
HERPUD1-209ENST00000564678 COPB1P53618 953 aaKnown RBP8.1□□□□□ -1.11
HERPUD1-209ENST00000564678 KRT31Q15323 416 aa8.1□□□□□ -1.11
HERPUD1-209ENST00000564678 SLFN13Q68D06 897 aa8.1□□□□□ -1.11
HERPUD1-209ENST00000564678 MOXD1Q6UVY6 613 aa8.1□□□□□ -1.11
HERPUD1-209ENST00000564678 ILDR2Q71H61 639 aa8.1□□□□□ -1.11
HERPUD1-209ENST00000564678 SV2BQ7L1I2 683 aa8.1□□□□□ -1.11
HERPUD1-209ENST00000564678 REXO1L1PQ8IX06 675 aa8.1□□□□□ -1.11
HERPUD1-209ENST00000564678 GMCL1Q96IK5 515 aa8.1□□□□□ -1.11
HERPUD1-209ENST00000564678 CAMKK2Q96RR4 588 aa8.1□□□□□ -1.11
HERPUD1-209ENST00000564678 MMTAG2Q9BU76 263 aaKnown RBP8.1□□□□□ -1.11
HERPUD1-209ENST00000564678 L2HGDHQ9H9P8 463 aa8.1□□□□□ -1.11
HERPUD1-209ENST00000564678 METTL5Q9NRN9 209 aaKnown RBP8.1□□□□□ -1.11
HERPUD1-209ENST00000564678 PHLPP2Q6ZVD8 1323 aa8.1□□□□□ -1.11
HERPUD1-209ENST00000564678 ZNF646O15015 1829 aaPredicted RBP8.1□□□□□ -1.11
HERPUD1-209ENST00000564678 KCNJ18B7U540 433 aa8.1□□□□□ -1.11
HERPUD1-209ENST00000564678 TREHO43280 583 aa8.1□□□□□ -1.11
HERPUD1-209ENST00000564678 EDIL3O43854 480 aa8.1□□□□□ -1.11
HERPUD1-209ENST00000564678 SORBS3O60504 671 aa8.1□□□□□ -1.11
HERPUD1-209ENST00000564678 CCNE1P24864 410 aa8.1□□□□□ -1.11
HERPUD1-209ENST00000564678 TXKP42681 527 aa8.1□□□□□ -1.11
HERPUD1-209ENST00000564678 ADKP55263 362 aaKnown RBP8.1□□□□□ -1.11
HERPUD1-209ENST00000564678 RBM10P98175 930 aaKnown RBP8.1□□□□□ -1.11
HERPUD1-209ENST00000564678 ATP2B2Q01814 1243 aa8.1□□□□□ -1.11
HERPUD1-209ENST00000564678 TCP10Q12799 353 aa8.1□□□□□ -1.11
HERPUD1-209ENST00000564678 TRAF1Q13077 416 aa8.1□□□□□ -1.11
HERPUD1-209ENST00000564678 AP3B2Q13367 1082 aa8.1□□□□□ -1.11
HERPUD1-209ENST00000564678 KCNJ12Q14500 433 aa8.1□□□□□ -1.11
HERPUD1-209ENST00000564678 AOC3Q16853 763 aa8.1□□□□□ -1.11
HERPUD1-209ENST00000564678 KRT79Q5XKE5 535 aa8.1□□□□□ -1.11
HERPUD1-209ENST00000564678 TTBK2Q6IQ55 1244 aa8.1□□□□□ -1.11
HERPUD1-209ENST00000564678 FOXR2Q6PJQ5 311 aa8.1□□□□□ -1.11
HERPUD1-209ENST00000564678 SH3BP5LQ7L8J4 393 aa8.1□□□□□ -1.11
HERPUD1-209ENST00000564678 RTKN2Q8IZC4 609 aa8.1□□□□□ -1.11
HERPUD1-209ENST00000564678 ANKRD7Q92527 254 aa8.1□□□□□ -1.11
HERPUD1-209ENST00000564678 EXOC1Q9NV70 894 aa8.1□□□□□ -1.11
HERPUD1-209ENST00000564678 TMEM260Q9NX78 707 aa8.1□□□□□ -1.11
HERPUD1-209ENST00000564678 HERC5Q9UII4 1024 aaKnown RBP8.1□□□□□ -1.11
HERPUD1-209ENST00000564678 GDAQ9Y2T3 454 aa8.1□□□□□ -1.11
HERPUD1-209ENST00000564678 PPP2R2CQ9Y2T4 447 aa8.1□□□□□ -1.11
HERPUD1-209ENST00000564678 SIPA1L1O43166 1804 aa8.09□□□□□ -1.11
HERPUD1-209ENST00000564678 CYP3A7-CYP3A51PA0A087WV96 503 aa8.09□□□□□ -1.11
HERPUD1-209ENST00000564678 A0A1W2PQC6 194 aa8.09□□□□□ -1.11
HERPUD1-209ENST00000564678 PPP1R11O60927 126 aaPredicted RBP8.09□□□□□ -1.11
HERPUD1-209ENST00000564678 MFAP3LO75121 409 aa8.09□□□□□ -1.11
HERPUD1-209ENST00000564678 FOSP01100 380 aaPredicted RBP8.09□□□□□ -1.11
HERPUD1-209ENST00000564678 CYP3A7P24462 503 aa8.09□□□□□ -1.11
HERPUD1-209ENST00000564678 CHRNA5P30532 468 aa8.09□□□□□ -1.11
HERPUD1-209ENST00000564678 ICA1Q05084 483 aa8.09□□□□□ -1.11
HERPUD1-209ENST00000564678 CBLBQ13191 982 aa8.09□□□□□ -1.11
HERPUD1-209ENST00000564678 PSMD2Q13200 908 aa8.09□□□□□ -1.11
HERPUD1-209ENST00000564678 SEPT2Q15019 361 aa8.09□□□□□ -1.11
HERPUD1-209ENST00000564678 ABCB5Q2M3G0 1257 aa8.09□□□□□ -1.11
HERPUD1-209ENST00000564678 BTNL9Q6UXG8 535 aa8.09□□□□□ -1.11
HERPUD1-209ENST00000564678 KCTD1Q719H9 257 aa8.09□□□□□ -1.11
HERPUD1-209ENST00000564678 CLEC10AQ8IUN9 316 aa8.09□□□□□ -1.11
HERPUD1-209ENST00000564678 SIAH1Q8IUQ4 282 aa8.09□□□□□ -1.11
HERPUD1-209ENST00000564678 FAM114A1Q8IWE2 563 aa8.09□□□□□ -1.11
HERPUD1-209ENST00000564678 ERO1AQ96HE7 468 aa8.09□□□□□ -1.11
HERPUD1-209ENST00000564678 CDK5RAP3Q96JB5 506 aa8.09□□□□□ -1.11
HERPUD1-209ENST00000564678 SRRTQ9BXP5 876 aaKnown RBP8.09□□□□□ -1.11
HERPUD1-209ENST00000564678 NT5C3AQ9H0P0 336 aa8.09□□□□□ -1.11
HERPUD1-209ENST00000564678 DDX25Q9UHL0 483 aaKnown RBP8.09□□□□□ -1.11
HERPUD1-209ENST00000564678 ADAMTSL1Q8N6G6 1762 aa8.08□□□□□ -1.12
HERPUD1-209ENST00000564678 F5H6K3 240 aa8.08□□□□□ -1.12
HERPUD1-209ENST00000564678 PPIP5K2O43314 1243 aa8.08□□□□□ -1.12
HERPUD1-209ENST00000564678 SLU7O95391 586 aaKnown RBP8.08□□□□□ -1.12
HERPUD1-209ENST00000564678 S100BP04271 92 aaPredicted RBP8.08□□□□□ -1.12
HERPUD1-209ENST00000564678 SLC16A2P36021 539 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms