RNA–Protein interactions for RNA: ENST00000564638.1

MAP1LC3B-205, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2

Gene MAP1LC3B, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-205ENST00000564638 MRPL12P52815 198 aaKnown RBP8.34□□□□□ -1.07
MAP1LC3B-205ENST00000564638 PRKCZQ05513 592 aa8.34□□□□□ -1.07
MAP1LC3B-205ENST00000564638 SEMA3FQ13275 785 aa8.34□□□□□ -1.07
MAP1LC3B-205ENST00000564638 NOLC1Q14978 699 aaKnown RBP eCLIP8.34□□□□□ -1.07
MAP1LC3B-205ENST00000564638 KARSQ15046 597 aaKnown RBP8.34□□□□□ -1.07
MAP1LC3B-205ENST00000564638 CDC37Q16543 378 aaPredicted RBP8.34□□□□□ -1.07
MAP1LC3B-205ENST00000564638 CALCRLQ16602 461 aa8.34□□□□□ -1.07
MAP1LC3B-205ENST00000564638 QRICH1Q2TAL8 776 aa8.34□□□□□ -1.07
MAP1LC3B-205ENST00000564638 CCDC144BQ3MJ40 725 aa8.34□□□□□ -1.07
MAP1LC3B-205ENST00000564638 DNTTIP2Q5QJE6 756 aaKnown RBP8.34□□□□□ -1.07
MAP1LC3B-205ENST00000564638 RRAGBQ5VZM2 374 aa8.34□□□□□ -1.07
MAP1LC3B-205ENST00000564638 MCTP2Q6DN12 878 aa8.34□□□□□ -1.07
MAP1LC3B-205ENST00000564638 SNRNP48Q6IEG0 339 aaKnown RBP8.34□□□□□ -1.07
MAP1LC3B-205ENST00000564638 FBXO46Q6PJ61 603 aaPredicted RBP8.34□□□□□ -1.07
MAP1LC3B-205ENST00000564638 GPR142Q7Z601 462 aa8.34□□□□□ -1.07
MAP1LC3B-205ENST00000564638 PLEKHH3Q7Z736 793 aa8.34□□□□□ -1.07
MAP1LC3B-205ENST00000564638 FILIP1Q7Z7B0 1213 aa8.34□□□□□ -1.07
MAP1LC3B-205ENST00000564638 CABP7Q86V35 215 aa8.34□□□□□ -1.07
MAP1LC3B-205ENST00000564638 RAET1EQ8TD07 263 aa8.34□□□□□ -1.07
MAP1LC3B-205ENST00000564638 CCDC47Q96A33 483 aaKnown RBP8.34□□□□□ -1.07
MAP1LC3B-205ENST00000564638 RAB34Q9BZG1 259 aa8.34□□□□□ -1.07
MAP1LC3B-205ENST00000564638 PRO3102Q9H379 93 aa8.34□□□□□ -1.07
MAP1LC3B-205ENST00000564638 HOMER2Q9NSB8 354 aa8.34□□□□□ -1.07
MAP1LC3B-205ENST00000564638 SPTLC3Q9NUV7 552 aa8.34□□□□□ -1.07
MAP1LC3B-205ENST00000564638 TMEM260Q9NX78 707 aa8.34□□□□□ -1.07
MAP1LC3B-205ENST00000564638 SRRDQ9UH36 339 aa8.34□□□□□ -1.07
MAP1LC3B-205ENST00000564638 NRBP1Q9UHY1 535 aa8.34□□□□□ -1.07
MAP1LC3B-205ENST00000564638 GABRQQ9UN88 632 aa8.34□□□□□ -1.07
MAP1LC3B-205ENST00000564638 NFE2L3Q9Y4A8 694 aa8.34□□□□□ -1.07
MAP1LC3B-205ENST00000564638 PTCH2Q9Y6C5 1203 aa8.34□□□□□ -1.07
MAP1LC3B-205ENST00000564638 IVNS1ABPQ9Y6Y0 642 aa8.34□□□□□ -1.07
MAP1LC3B-205ENST00000564638 H0YGN5 161 aa8.33□□□□□ -1.08
MAP1LC3B-205ENST00000564638 PLA2G6O60733 806 aa8.33□□□□□ -1.08
MAP1LC3B-205ENST00000564638 SLC25A27O95847 323 aa8.33□□□□□ -1.08
MAP1LC3B-205ENST00000564638 FDX1P10109 184 aa8.33□□□□□ -1.08
MAP1LC3B-205ENST00000564638 ALAS1P13196 640 aa8.33□□□□□ -1.08
MAP1LC3B-205ENST00000564638 TAL1P17542 331 aaPredicted RBP8.33□□□□□ -1.08
MAP1LC3B-205ENST00000564638 ERCC3P19447 782 aa8.33□□□□□ -1.08
MAP1LC3B-205ENST00000564638 CYP2B6P20813 491 aa8.33□□□□□ -1.08
MAP1LC3B-205ENST00000564638 CDK11BP21127 795 aaKnown RBP8.33□□□□□ -1.08
MAP1LC3B-205ENST00000564638 UBASH3AP57075 661 aa8.33□□□□□ -1.08
MAP1LC3B-205ENST00000564638 TRAF1Q13077 416 aa8.33□□□□□ -1.08
MAP1LC3B-205ENST00000564638 BTNL9Q6UXG8 535 aa8.33□□□□□ -1.08
MAP1LC3B-205ENST00000564638 TRMT44Q8IYL2 757 aaKnown RBP8.33□□□□□ -1.08
MAP1LC3B-205ENST00000564638 REPS2Q8NFH8 660 aa8.33□□□□□ -1.08
MAP1LC3B-205ENST00000564638 CACTINQ8WUQ7 758 aaKnown RBP8.33□□□□□ -1.08
MAP1LC3B-205ENST00000564638 CALML4Q96GE6 196 aa8.33□□□□□ -1.08
MAP1LC3B-205ENST00000564638 NUDT12Q9BQG2 462 aa8.33□□□□□ -1.08
MAP1LC3B-205ENST00000564638 TEX13BQ9BXU2 312 aa8.33□□□□□ -1.08
MAP1LC3B-205ENST00000564638 GTPBP4Q9BZE4 634 aaKnown RBP8.33□□□□□ -1.08
MAP1LC3B-205ENST00000564638 HSD3B7Q9H2F3 369 aa8.33□□□□□ -1.08
MAP1LC3B-205ENST00000564638 SLC38A10Q9HBR0 1119 aa8.33□□□□□ -1.08
MAP1LC3B-205ENST00000564638 FANCLQ9NW38 375 aa8.33□□□□□ -1.08
MAP1LC3B-205ENST00000564638 ZNF214Q9UL59 606 aaPredicted RBP8.33□□□□□ -1.08
MAP1LC3B-205ENST00000564638 CCPG1Q9ULG6 757 aa8.33□□□□□ -1.08
MAP1LC3B-205ENST00000564638 ADAMTS5Q9UNA0 930 aa8.33□□□□□ -1.08
MAP1LC3B-205ENST00000564638 PTPN22Q9Y2R2 807 aa8.33□□□□□ -1.08
MAP1LC3B-205ENST00000564638 PP2D1A8MPX8 630 aa8.32□□□□□ -1.08
MAP1LC3B-205ENST00000564638 PPP1R11O60927 126 aaPredicted RBP8.32□□□□□ -1.08
MAP1LC3B-205ENST00000564638 MYCP01106 439 aaPredicted RBP8.32□□□□□ -1.08
MAP1LC3B-205ENST00000564638 GNRH1P01148 92 aa8.32□□□□□ -1.08
MAP1LC3B-205ENST00000564638 RPN1P04843 607 aaKnown RBP8.32□□□□□ -1.08
MAP1LC3B-205ENST00000564638 TPM2P07951 284 aa8.32□□□□□ -1.08
MAP1LC3B-205ENST00000564638 ATP1A3P13637 1013 aa8.32□□□□□ -1.08
MAP1LC3B-205ENST00000564638 PLCG1P19174 1290 aa8.32□□□□□ -1.08
MAP1LC3B-205ENST00000564638 SFPQP23246 707 aaKnown RBP eCLIP8.32□□□□□ -1.08
MAP1LC3B-205ENST00000564638 COPB2P35606 906 aa8.32□□□□□ -1.08
MAP1LC3B-205ENST00000564638 CLK2P49760 499 aaKnown RBP8.32□□□□□ -1.08
MAP1LC3B-205ENST00000564638 FLT3LGP49771 235 aa8.32□□□□□ -1.08
MAP1LC3B-205ENST00000564638 MNX1P50219 401 aaPredicted RBP8.32□□□□□ -1.08
MAP1LC3B-205ENST00000564638 FXR2P51116 673 aaKnown RBP eCLIP8.32□□□□□ -1.08
MAP1LC3B-205ENST00000564638 TERF1P54274 439 aa8.32□□□□□ -1.08
MAP1LC3B-205ENST00000564638 PRMT2P55345 433 aa8.32□□□□□ -1.08
MAP1LC3B-205ENST00000564638 LRMPQ12912 555 aa8.32□□□□□ -1.08
MAP1LC3B-205ENST00000564638 AP3B2Q13367 1082 aa8.32□□□□□ -1.08
MAP1LC3B-205ENST00000564638 STIM1Q13586 685 aa8.32□□□□□ -1.08
MAP1LC3B-205ENST00000564638 UBE2SQ16763 222 aa8.32□□□□□ -1.08
MAP1LC3B-205ENST00000564638 TPD52L1Q16890 204 aaPredicted RBP8.32□□□□□ -1.08
MAP1LC3B-205ENST00000564638 USH1GQ495M9 461 aa8.32□□□□□ -1.08
MAP1LC3B-205ENST00000564638 ZNF658Q5TYW1 1059 aaPredicted RBP8.32□□□□□ -1.08
MAP1LC3B-205ENST00000564638 SPATA1Q5VX52 437 aa8.32□□□□□ -1.08
MAP1LC3B-205ENST00000564638 KLHL10Q6JEL2 608 aa8.32□□□□□ -1.08
MAP1LC3B-205ENST00000564638 RIOX2Q8IUF8 465 aa8.32□□□□□ -1.08
MAP1LC3B-205ENST00000564638 VSTM4Q8IW00 320 aa8.32□□□□□ -1.08
MAP1LC3B-205ENST00000564638 LRRC8AQ8IWT6 810 aa8.32□□□□□ -1.08
MAP1LC3B-205ENST00000564638 C17orf53Q8N3J3 647 aaPredicted RBP8.32□□□□□ -1.08
MAP1LC3B-205ENST00000564638 SHCBP1Q8NEM2 672 aa8.32□□□□□ -1.08
MAP1LC3B-205ENST00000564638 CDK5RAP3Q96JB5 506 aa8.32□□□□□ -1.08
MAP1LC3B-205ENST00000564638 AGBL1Q96MI9 1066 aa8.32□□□□□ -1.08
MAP1LC3B-205ENST00000564638 MMP19Q99542 508 aa8.32□□□□□ -1.08
MAP1LC3B-205ENST00000564638 AMNQ9BXJ7 453 aa8.32□□□□□ -1.08
MAP1LC3B-205ENST00000564638 BLZF1Q9H2G9 400 aa8.32□□□□□ -1.08
MAP1LC3B-205ENST00000564638 RANBP17Q9H2T7 1088 aaKnown RBP8.32□□□□□ -1.08
MAP1LC3B-205ENST00000564638 PSTPIP2Q9H939 334 aa8.32□□□□□ -1.08
MAP1LC3B-205ENST00000564638 STK17AQ9UEE5 414 aa8.32□□□□□ -1.08
MAP1LC3B-205ENST00000564638 CTNND2Q9UQB3 1225 aa8.32□□□□□ -1.08
MAP1LC3B-205ENST00000564638 PCDHA1Q9Y5I3 950 aa8.32□□□□□ -1.08
MAP1LC3B-205ENST00000564638 PLXNA1Q9UIW2 1896 aa8.32□□□□□ -1.08
MAP1LC3B-205ENST00000564638 SLC15A5A6NIM6 579 aa8.31□□□□□ -1.08
MAP1LC3B-205ENST00000564638 PPP1R3GB7ZBB8 358 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms