RNA–Protein interactions for RNA: ENST00000564511.1

TUBGCP4-209, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 3

Gene TUBGCP4, Length 588 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-209ENST00000564511 ALPK3Q96L96 1907 aa6.42□□□□□ -1.38
TUBGCP4-209ENST00000564511 CHD9Q3L8U1 2897 aa6.42□□□□□ -1.38
TUBGCP4-209ENST00000564511 CDH23Q9H251 3354 aa6.41□□□□□ -1.38
TUBGCP4-209ENST00000564511 KIAA1324LA8MWY0 1029 aaPredicted RBP6.41□□□□□ -1.38
TUBGCP4-209ENST00000564511 PEX10O60683 326 aa6.41□□□□□ -1.38
TUBGCP4-209ENST00000564511 DLGAP3O95886 979 aa6.41□□□□□ -1.38
TUBGCP4-209ENST00000564511 POLR3DP05423 398 aaPredicted RBP6.41□□□□□ -1.38
TUBGCP4-209ENST00000564511 XRCC5P13010 732 aaKnown RBP6.41□□□□□ -1.38
TUBGCP4-209ENST00000564511 SLC5A1P13866 664 aa6.41□□□□□ -1.38
TUBGCP4-209ENST00000564511 ZKSCAN1P17029 563 aaPredicted RBP6.41□□□□□ -1.38
TUBGCP4-209ENST00000564511 FGFR2P21802 821 aa6.41□□□□□ -1.38
TUBGCP4-209ENST00000564511 HMGCS2P54868 508 aa6.41□□□□□ -1.38
TUBGCP4-209ENST00000564511 EXOSC9Q06265 439 aaKnown RBP6.41□□□□□ -1.38
TUBGCP4-209ENST00000564511 ZNF211Q13398 564 aaPredicted RBP6.41□□□□□ -1.38
TUBGCP4-209ENST00000564511 PICALMQ13492 652 aa6.41□□□□□ -1.38
TUBGCP4-209ENST00000564511 KCTD2Q14681 263 aa6.41□□□□□ -1.38
TUBGCP4-209ENST00000564511 CCDC27Q2M243 656 aa6.41□□□□□ -1.38
TUBGCP4-209ENST00000564511 FDX2Q6P4F2 183 aa6.41□□□□□ -1.38
TUBGCP4-209ENST00000564511 BEND4Q6ZU67 534 aa6.41□□□□□ -1.38
TUBGCP4-209ENST00000564511 CCAR1Q8IX12 1150 aaKnown RBP6.41□□□□□ -1.38
TUBGCP4-209ENST00000564511 ASAP3Q8TDY4 903 aa6.41□□□□□ -1.38
TUBGCP4-209ENST00000564511 LPIN2Q92539 896 aa6.41□□□□□ -1.38
TUBGCP4-209ENST00000564511 DBNDD2Q9BQY9 259 aa6.41□□□□□ -1.38
TUBGCP4-209ENST00000564511 IDI2Q9BXS1 227 aa6.41□□□□□ -1.38
TUBGCP4-209ENST00000564511 KCNF1Q9H3M0 494 aa6.41□□□□□ -1.38
TUBGCP4-209ENST00000564511 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.41□□□□□ -1.38
TUBGCP4-209ENST00000564511 KIF16BQ96L93 1317 aa6.41□□□□□ -1.38
TUBGCP4-209ENST00000564511 ATRNL1Q5VV63 1379 aa6.41□□□□□ -1.38
TUBGCP4-209ENST00000564511 DDX60LQ5H9U9 1706 aaKnown RBP6.4□□□□□ -1.38
TUBGCP4-209ENST00000564511 METTL12A8MUP2 240 aa6.4□□□□□ -1.38
TUBGCP4-209ENST00000564511 ESRRAP11474 423 aaPredicted RBP6.4□□□□□ -1.38
TUBGCP4-209ENST00000564511 FOSL2P15408 326 aa6.4□□□□□ -1.38
TUBGCP4-209ENST00000564511 CCND3P30281 292 aaPredicted RBP6.4□□□□□ -1.38
TUBGCP4-209ENST00000564511 IRX3P78415 501 aaPredicted RBP6.4□□□□□ -1.38
TUBGCP4-209ENST00000564511 PDE3AQ14432 1141 aa6.4□□□□□ -1.38
TUBGCP4-209ENST00000564511 SHHQ15465 462 aa6.4□□□□□ -1.38
TUBGCP4-209ENST00000564511 CCL14Q16627 93 aa6.4□□□□□ -1.38
TUBGCP4-209ENST00000564511 RABL6Q3YEC7 729 aaPredicted RBP6.4□□□□□ -1.38
TUBGCP4-209ENST00000564511 GPRC5AQ8NFJ5 357 aa6.4□□□□□ -1.38
TUBGCP4-209ENST00000564511 SHKBP1Q8TBC3 707 aa6.4□□□□□ -1.38
TUBGCP4-209ENST00000564511 SOCS4Q8WXH5 440 aa6.4□□□□□ -1.38
TUBGCP4-209ENST00000564511 TMPRSS13Q9BYE2 586 aa6.4□□□□□ -1.38
TUBGCP4-209ENST00000564511 SOX17Q9H6I2 414 aaPredicted RBP6.4□□□□□ -1.38
TUBGCP4-209ENST00000564511 PRKRIP1Q9H875 184 aaPredicted RBP6.4□□□□□ -1.38
TUBGCP4-209ENST00000564511 GNL3LQ9NVN8 582 aaKnown RBP6.4□□□□□ -1.38
TUBGCP4-209ENST00000564511 MORF4L1Q9UBU8 362 aa6.4□□□□□ -1.38
TUBGCP4-209ENST00000564511 HIF3AQ9Y2N7 669 aa6.4□□□□□ -1.38
TUBGCP4-209ENST00000564511 IL16Q14005 1332 aa6.4□□□□□ -1.39
TUBGCP4-209ENST00000564511 FANCIQ9NVI1 1328 aa6.4□□□□□ -1.39
TUBGCP4-209ENST00000564511 PIEZO1Q92508 2521 aa6.39□□□□□ -1.39
TUBGCP4-209ENST00000564511 AK9Q5TCS8 1911 aa6.39□□□□□ -1.39
TUBGCP4-209ENST00000564511 LOC100289279A0A1B0GTE1 492 aa6.39□□□□□ -1.39
TUBGCP4-209ENST00000564511 ADAMTS4O75173 837 aa6.39□□□□□ -1.39
TUBGCP4-209ENST00000564511 CNGA1P29973 690 aa6.39□□□□□ -1.39
TUBGCP4-209ENST00000564511 MAPK4P31152 587 aa6.39□□□□□ -1.39
TUBGCP4-209ENST00000564511 ECM1Q16610 540 aa6.39□□□□□ -1.39
TUBGCP4-209ENST00000564511 SGO2Q562F6 1265 aa6.39□□□□□ -1.39
TUBGCP4-209ENST00000564511 C9orf50Q5SZB4 431 aa6.39□□□□□ -1.39
TUBGCP4-209ENST00000564511 DZIP1Q86YF9 867 aaKnown RBP6.39□□□□□ -1.39
TUBGCP4-209ENST00000564511 ANKRD44Q8N8A2 993 aa6.39□□□□□ -1.39
TUBGCP4-209ENST00000564511 C12orf50Q8NA57 414 aaPredicted RBP6.39□□□□□ -1.39
TUBGCP4-209ENST00000564511 SMG8Q8ND04 991 aaKnown RBP6.39□□□□□ -1.39
TUBGCP4-209ENST00000564511 USP26Q9BXU7 913 aa6.39□□□□□ -1.39
TUBGCP4-209ENST00000564511 OSBPL5Q9H0X9 879 aaPredicted RBP6.39□□□□□ -1.39
TUBGCP4-209ENST00000564511 TTYH1Q9H313 450 aaPredicted RBP6.39□□□□□ -1.39
TUBGCP4-209ENST00000564511 CWC22Q9HCG8 908 aaKnown RBP6.39□□□□□ -1.39
TUBGCP4-209ENST00000564511 DDX4Q9NQI0 724 aaKnown RBP6.39□□□□□ -1.39
TUBGCP4-209ENST00000564511 PRDM5Q9NQX1 630 aaPredicted RBP6.39□□□□□ -1.39
TUBGCP4-209ENST00000564511 ABCF2Q9UG63 623 aa6.39□□□□□ -1.39
TUBGCP4-209ENST00000564511 ATP11BQ9Y2G3 1177 aa6.39□□□□□ -1.39
TUBGCP4-209ENST00000564511 COL2A1P02458 1487 aaPredicted RBP6.39□□□□□ -1.39
TUBGCP4-209ENST00000564511 EYA2O00167 538 aa6.38□□□□□ -1.39
TUBGCP4-209ENST00000564511 ICMTO60725 284 aa6.38□□□□□ -1.39
TUBGCP4-209ENST00000564511 TIAF1O95411 115 aa6.38□□□□□ -1.39
TUBGCP4-209ENST00000564511 SPINK2P20155 84 aa6.38□□□□□ -1.39
TUBGCP4-209ENST00000564511 MAP4P27816 1152 aaKnown RBP6.38□□□□□ -1.39
TUBGCP4-209ENST00000564511 CAP2P40123 477 aa6.38□□□□□ -1.39
TUBGCP4-209ENST00000564511 RGS2P41220 211 aa6.38□□□□□ -1.39
TUBGCP4-209ENST00000564511 BTDP43251 543 aa6.38□□□□□ -1.39
TUBGCP4-209ENST00000564511 RTP1P59025 263 aa6.38□□□□□ -1.39
TUBGCP4-209ENST00000564511 HERVK_113P62684 666 aa6.38□□□□□ -1.39
TUBGCP4-209ENST00000564511 SMAD3P84022 425 aaKnown RBP6.38□□□□□ -1.39
TUBGCP4-209ENST00000564511 PLEKHH3Q7Z736 793 aa6.38□□□□□ -1.39
TUBGCP4-209ENST00000564511 ZGPATQ8N5A5 531 aaKnown RBP6.38□□□□□ -1.39
TUBGCP4-209ENST00000564511 USP6NLQ92738 828 aa6.38□□□□□ -1.39
TUBGCP4-209ENST00000564511 BADQ92934 168 aa6.38□□□□□ -1.39
TUBGCP4-209ENST00000564511 EDC3Q96F86 508 aaKnown RBP6.38□□□□□ -1.39
TUBGCP4-209ENST00000564511 KRTAP4-12Q9BQ66 201 aa6.38□□□□□ -1.39
TUBGCP4-209ENST00000564511 PAGR1Q9BTK6 254 aa6.38□□□□□ -1.39
TUBGCP4-209ENST00000564511 PORCNQ9H237 461 aa6.38□□□□□ -1.39
TUBGCP4-209ENST00000564511 SUGCTQ9HAC7 445 aa6.38□□□□□ -1.39
TUBGCP4-209ENST00000564511 AS3MTQ9HBK9 375 aa6.38□□□□□ -1.39
TUBGCP4-209ENST00000564511 TXNRD2Q9NNW7 524 aa6.38□□□□□ -1.39
TUBGCP4-209ENST00000564511 TMOD4Q9NZQ9 345 aa6.38□□□□□ -1.39
TUBGCP4-209ENST00000564511 RBPJLQ9UBG7 517 aa6.38□□□□□ -1.39
TUBGCP4-209ENST00000564511 DENND2AQ9ULE3 1009 aa6.38□□□□□ -1.39
TUBGCP4-209ENST00000564511 UTYO14607 1347 aa6.38□□□□□ -1.39
TUBGCP4-209ENST00000564511 XIRP2A4UGR9 3374 aa6.37□□□□□ -1.39
TUBGCP4-209ENST00000564511 GAKO14976 1311 aa6.37□□□□□ -1.39
TUBGCP4-209ENST00000564511 SALL1Q9NSC2 1324 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms