RNA–Protein interactions for RNA: ENST00000564252.1

NME3-206, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 599 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-206ENST00000564252 TMTC2Q8N394 836 aa27.54■■■□□ 2
NME3-206ENST00000564252 SRBD1Q8N5C6 995 aaKnown RBP27.54■■■□□ 2
NME3-206ENST00000564252 SMARCC2Q8TAQ2 1214 aa27.54■■■□□ 2
NME3-206ENST00000564252 ARNTL2Q8WYA1 636 aa27.54■■■□□ 2
NME3-206ENST00000564252 RTEL1Q9NZ71 1219 aa27.54■■■□□ 2
NME3-206ENST00000564252 SEC63Q9UGP8 760 aaKnown RBP27.54■■■□□ 2
NME3-206ENST00000564252 ABHD14A-ACY1A0A1B0GW23 586 aa27.53■■■□□ 2
NME3-206ENST00000564252 LCHNA4D1U4 455 aa27.53■■■□□ 2
NME3-206ENST00000564252 FIBPO43427 364 aa27.53■■■□□ 2
NME3-206ENST00000564252 GNAQP50148 359 aa27.53■■■□□ 2
NME3-206ENST00000564252 NEDD9Q14511 834 aa27.53■■■□□ 2
NME3-206ENST00000564252 PCNX4Q63HM2 1172 aa27.53■■■□□ 2
NME3-206ENST00000564252 NFXL1Q6ZNB6 911 aa27.53■■■□□ 2
NME3-206ENST00000564252 CYFIP1Q7L576 1253 aa27.53■■■□□ 2
NME3-206ENST00000564252 SPRED2Q7Z698 418 aa27.53■■■□□ 2
NME3-206ENST00000564252 CUL5Q93034 780 aa27.53■■■□□ 2
NME3-206ENST00000564252 C17orf102A2RUQ5 167 aa27.52■■■□□ 2
NME3-206ENST00000564252 CCDC69A6NI79 296 aa27.52■■■□□ 2
NME3-206ENST00000564252 NOP56O00567 594 aaKnown RBP27.52■■■□□ 2
NME3-206ENST00000564252 SMIM10L2AP0DMW4 78 aa27.52■■■□□ 2
NME3-206ENST00000564252 SMIM10L2BP0DMW5 78 aa27.52■■■□□ 2
NME3-206ENST00000564252 RXRAP19793 462 aa27.52■■■□□ 2
NME3-206ENST00000564252 LIFRP42702 1097 aa27.52■■■□□ 2
NME3-206ENST00000564252 NECTIN1Q15223 517 aa27.52■■■□□ 2
NME3-206ENST00000564252 CREB3L3Q68CJ9 461 aa27.52■■■□□ 2
NME3-206ENST00000564252 CMTR1Q8N1G2 835 aaKnown RBP27.52■■■□□ 2
NME3-206ENST00000564252 GPR20Q99678 358 aa27.52■■■□□ 2
NME3-206ENST00000564252 USP26Q9BXU7 913 aa27.52■■■□□ 2
NME3-206ENST00000564252 GTPBP6O43824 516 aaPredicted RBP27.51■■□□□ 1.99
NME3-206ENST00000564252 EFCAB14O75071 495 aa27.51■■□□□ 1.99
NME3-206ENST00000564252 IKBKEQ14164 716 aa27.51■■□□□ 1.99
NME3-206ENST00000564252 XRRA1Q6P2D8 792 aa27.51■■□□□ 1.99
NME3-206ENST00000564252 ATP6V0A1Q93050 837 aa27.51■■□□□ 1.99
NME3-206ENST00000564252 TSPYL2Q9H2G4 693 aaPredicted RBP27.51■■□□□ 1.99
NME3-206ENST00000564252 RNPEPQ9H4A4 650 aa27.51■■□□□ 1.99
NME3-206ENST00000564252 TELO2Q9Y4R8 837 aa27.51■■□□□ 1.99
NME3-206ENST00000564252 COL4A4P53420 1690 aaPredicted RBP27.5■■□□□ 1.99
NME3-206ENST00000564252 EMSYQ7Z589 1322 aa27.5■■□□□ 1.99
NME3-206ENST00000564252 LGR5O75473 907 aa27.5■■□□□ 1.99
NME3-206ENST00000564252 GJB5O95377 273 aa27.5■■□□□ 1.99
NME3-206ENST00000564252 THPOP40225 353 aa27.5■■□□□ 1.99
NME3-206ENST00000564252 KRT40Q6A162 431 aa27.5■■□□□ 1.99
NME3-206ENST00000564252 SENP7Q9BQF6 1050 aa27.5■■□□□ 1.99
NME3-206ENST00000564252 ZBED2Q9BTP6 218 aa27.5■■□□□ 1.99
NME3-206ENST00000564252 RSPH10B2B2RC85 870 aa27.49■■□□□ 1.99
NME3-206ENST00000564252 TNFRSF10AO00220 468 aa27.49■■□□□ 1.99
NME3-206ENST00000564252 TREHO43280 583 aa27.49■■□□□ 1.99
NME3-206ENST00000564252 RSPH10BP0C881 870 aa27.49■■□□□ 1.99
NME3-206ENST00000564252 CALM1P0DP23 149 aa27.49■■□□□ 1.99
NME3-206ENST00000564252 CALM2P0DP24 149 aa27.49■■□□□ 1.99
NME3-206ENST00000564252 CALM3P0DP25 149 aa27.49■■□□□ 1.99
NME3-206ENST00000564252 RAD9AQ99638 391 aa27.49■■□□□ 1.99
NME3-206ENST00000564252 LPXNO60711 386 aa27.48■■□□□ 1.99
NME3-206ENST00000564252 GRB10Q13322 594 aa27.48■■□□□ 1.99
NME3-206ENST00000564252 MKRN4PQ13434 485 aaPredicted RBP27.48■■□□□ 1.99
NME3-206ENST00000564252 TRIM50Q86XT4 487 aa27.48■■□□□ 1.99
NME3-206ENST00000564252 RAB11FIP4Q86YS3 637 aa27.48■■□□□ 1.99
NME3-206ENST00000564252 ADAMTS19Q8TE59 1207 aa27.48■■□□□ 1.99
NME3-206ENST00000564252 LRRC2Q9BYS8 371 aa27.48■■□□□ 1.99
NME3-206ENST00000564252 ANO2Q9NQ90 1003 aa27.48■■□□□ 1.99
NME3-206ENST00000564252 SLC12A7Q9Y666 1083 aa27.48■■□□□ 1.99
NME3-206ENST00000564252 BDP1A6H8Y1 2624 aa27.48■■□□□ 1.99
NME3-206ENST00000564252 MICAL3Q7RTP6 2002 aa27.47■■□□□ 1.99
NME3-206ENST00000564252 NLRX1Q86UT6 975 aa27.47■■□□□ 1.99
NME3-206ENST00000564252 DBF4BQ8NFT6 615 aa27.47■■□□□ 1.99
NME3-206ENST00000564252 PSTPIP2Q9H939 334 aa27.47■■□□□ 1.99
NME3-206ENST00000564252 NCOR1O75376 2440 aa27.46■■□□□ 1.99
NME3-206ENST00000564252 hCG_1642624A0A1W2PR95 340 aa27.46■■□□□ 1.99
NME3-206ENST00000564252 TFF2Q03403 129 aa27.46■■□□□ 1.99
NME3-206ENST00000564252 PLEKHG4Q58EX7 1191 aa27.46■■□□□ 1.99
NME3-206ENST00000564252 LIN28BQ6ZN17 250 aaKnown RBP eCLIP27.46■■□□□ 1.99
NME3-206ENST00000564252 TMTC3Q6ZXV5 915 aa27.46■■□□□ 1.99
NME3-206ENST00000564252 SGMS1Q86VZ5 419 aa27.46■■□□□ 1.99
NME3-206ENST00000564252 SETD4Q9NVD3 440 aa27.46■■□□□ 1.99
NME3-206ENST00000564252 CAND2O75155 1236 aa27.45■■□□□ 1.98
NME3-206ENST00000564252 SP4Q02446 784 aa27.45■■□□□ 1.98
NME3-206ENST00000564252 SKIV2LQ15477 1246 aaKnown RBP27.45■■□□□ 1.98
NME3-206ENST00000564252 UTP14CQ5TAP6 766 aaKnown RBP27.45■■□□□ 1.98
NME3-206ENST00000564252 FANCBQ8NB91 859 aa27.45■■□□□ 1.98
NME3-206ENST00000564252 GPRASP2Q96D09 838 aa27.45■■□□□ 1.98
NME3-206ENST00000564252 ZNF215Q9UL58 517 aaPredicted RBP27.45■■□□□ 1.98
NME3-206ENST00000564252 ATP9AO75110 1047 aa27.44■■□□□ 1.98
NME3-206ENST00000564252 GNAT1P11488 350 aa27.44■■□□□ 1.98
NME3-206ENST00000564252 ADAM17P78536 824 aa27.44■■□□□ 1.98
NME3-206ENST00000564252 UBE2SQ16763 222 aa27.44■■□□□ 1.98
NME3-206ENST00000564252 BMP2KLQ5H9B9 411 aa27.44■■□□□ 1.98
NME3-206ENST00000564252 FAM117BQ6P1L5 589 aa27.44■■□□□ 1.98
NME3-206ENST00000564252 CCDC82Q8N4S0 544 aa27.44■■□□□ 1.98
NME3-206ENST00000564252 GIMAP8Q8ND71 665 aaPredicted RBP27.44■■□□□ 1.98
NME3-206ENST00000564252 UHRF1Q96T88 793 aaPredicted RBP27.44■■□□□ 1.98
NME3-206ENST00000564252 OSBPL7Q9BZF2 842 aa27.44■■□□□ 1.98
NME3-206ENST00000564252 LINC01553A4QN01 128 aa27.43■■□□□ 1.98
NME3-206ENST00000564252 CTSHP09668 335 aa27.43■■□□□ 1.98
NME3-206ENST00000564252 KCNA2P16389 499 aa27.43■■□□□ 1.98
NME3-206ENST00000564252 ERVK-21P61565 698 aa27.43■■□□□ 1.98
NME3-206ENST00000564252 SKAP1Q86WV1 359 aa27.43■■□□□ 1.98
NME3-206ENST00000564252 MICU3Q86XE3 530 aa27.43■■□□□ 1.98
NME3-206ENST00000564252 IL27Q8NEV9 243 aa27.43■■□□□ 1.98
NME3-206ENST00000564252 GDPD5Q8WTR4 605 aa27.43■■□□□ 1.98
NME3-206ENST00000564252 SIP14410 1827 aa27.42■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms