RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 HOXD10P28358 340 aa14.56□□□□□ -0.08
SPG7-209ENST00000564047 GRIN1Q05586 938 aa14.56□□□□□ -0.08
SPG7-209ENST00000564047 PDIA5Q14554 519 aa14.56□□□□□ -0.08
SPG7-209ENST00000564047 OLFML2BQ68BL8 750 aa14.56□□□□□ -0.08
SPG7-209ENST00000564047 DPF3Q92784 378 aa14.56□□□□□ -0.08
SPG7-209ENST00000564047 AK8Q96MA6 479 aa14.56□□□□□ -0.08
SPG7-209ENST00000564047 CLIC6Q96NY7 704 aa14.56□□□□□ -0.08
SPG7-209ENST00000564047 TINF2Q9BSI4 451 aa14.56□□□□□ -0.08
SPG7-209ENST00000564047 RAB34Q9BZG1 259 aa14.56□□□□□ -0.08
SPG7-209ENST00000564047 CSRNP2Q9H175 543 aa14.56□□□□□ -0.08
SPG7-209ENST00000564047 VTA1Q9NP79 307 aa14.56□□□□□ -0.08
SPG7-209ENST00000564047 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.56□□□□□ -0.08
SPG7-209ENST00000564047 PTCH2Q9Y6C5 1203 aa14.56□□□□□ -0.08
SPG7-209ENST00000564047 PSMD10O75832 226 aa14.55□□□□□ -0.08
SPG7-209ENST00000564047 MYCP01106 439 aaPredicted RBP14.55□□□□□ -0.08
SPG7-209ENST00000564047 IGHA2P01877 340 aa14.55□□□□□ -0.08
SPG7-209ENST00000564047 TGFB3P10600 412 aa14.55□□□□□ -0.08
SPG7-209ENST00000564047 TECP42680 631 aa14.55□□□□□ -0.08
SPG7-209ENST00000564047 FLT3LGP49771 235 aa14.55□□□□□ -0.08
SPG7-209ENST00000564047 SEMA3FQ13275 785 aa14.55□□□□□ -0.08
SPG7-209ENST00000564047 IRF5Q13568 498 aa14.55□□□□□ -0.08
SPG7-209ENST00000564047 LRCH2Q5VUJ6 765 aa14.55□□□□□ -0.08
SPG7-209ENST00000564047 RESP18Q5W5W9 173 aa14.55□□□□□ -0.08
SPG7-209ENST00000564047 KCNV1Q6PIU1 500 aa14.55□□□□□ -0.08
SPG7-209ENST00000564047 SHC4Q6S5L8 630 aa14.55□□□□□ -0.08
SPG7-209ENST00000564047 SEPT14Q6ZU15 432 aa14.55□□□□□ -0.08
SPG7-209ENST00000564047 IGSF22Q8N9C0 903 aa14.55□□□□□ -0.08
SPG7-209ENST00000564047 TBC1D22BQ9NU19 505 aa14.55□□□□□ -0.08
SPG7-209ENST00000564047 FAM237AA0A1B0GTK4 181 aa14.54□□□□□ -0.08
SPG7-209ENST00000564047 DHX15O43143 795 aaKnown RBP14.54□□□□□ -0.08
SPG7-209ENST00000564047 GAS7O60861 476 aa14.54□□□□□ -0.08
SPG7-209ENST00000564047 SNAI1O95863 264 aaPredicted RBP14.54□□□□□ -0.08
SPG7-209ENST00000564047 MBD3O95983 291 aa14.54□□□□□ -0.08
SPG7-209ENST00000564047 CAP1Q01518 475 aa14.54□□□□□ -0.08
SPG7-209ENST00000564047 PRKCZQ05513 592 aa14.54□□□□□ -0.08
SPG7-209ENST00000564047 EEPD1Q7L9B9 569 aa14.54□□□□□ -0.08
SPG7-209ENST00000564047 TRMT44Q8IYL2 757 aaKnown RBP14.54□□□□□ -0.08
SPG7-209ENST00000564047 MRPS27Q92552 414 aaKnown RBP14.54□□□□□ -0.08
SPG7-209ENST00000564047 GJA10Q969M2 543 aa14.54□□□□□ -0.08
SPG7-209ENST00000564047 SENP7Q9BQF6 1050 aa14.54□□□□□ -0.08
SPG7-209ENST00000564047 TEKT3Q9BXF9 490 aa14.54□□□□□ -0.08
SPG7-209ENST00000564047 KATNBL1Q9H079 304 aa14.54□□□□□ -0.08
SPG7-209ENST00000564047 ABHD16BQ9H3Z7 469 aa14.54□□□□□ -0.08
SPG7-209ENST00000564047 FAM13BQ9NYF5 915 aa14.54□□□□□ -0.08
SPG7-209ENST00000564047 LRWD1Q9UFC0 647 aa14.54□□□□□ -0.08
SPG7-209ENST00000564047 SRRDQ9UH36 339 aa14.54□□□□□ -0.08
SPG7-209ENST00000564047 VAV3Q9UKW4 847 aa14.54□□□□□ -0.08
SPG7-209ENST00000564047 GABRQQ9UN88 632 aa14.54□□□□□ -0.08
SPG7-209ENST00000564047 TCHHQ07283 1943 aa14.53□□□□□ -0.08
SPG7-209ENST00000564047 NFASCO94856 1347 aa14.53□□□□□ -0.08
SPG7-209ENST00000564047 RBM47A0AV96 593 aaKnown RBP14.53□□□□□ -0.08
SPG7-209ENST00000564047 ATP9AO75110 1047 aa14.53□□□□□ -0.08
SPG7-209ENST00000564047 KCNA2P16389 499 aa14.53□□□□□ -0.08
SPG7-209ENST00000564047 PRMT2P55345 433 aa14.53□□□□□ -0.08
SPG7-209ENST00000564047 SPIRE1Q08AE8 756 aa14.53□□□□□ -0.08
SPG7-209ENST00000564047 ITGB3BPQ13352 177 aaPredicted RBP14.53□□□□□ -0.08
SPG7-209ENST00000564047 PPP2R5CQ13362 524 aa14.53□□□□□ -0.08
SPG7-209ENST00000564047 CCL14Q16627 93 aa14.53□□□□□ -0.08
SPG7-209ENST00000564047 B3GNT9Q6UX72 402 aa14.53□□□□□ -0.08
SPG7-209ENST00000564047 FBXO16Q8IX29 292 aaPredicted RBP14.53□□□□□ -0.08
SPG7-209ENST00000564047 FSIP1Q8NA03 581 aa14.53□□□□□ -0.08
SPG7-209ENST00000564047 GIMAP8Q8ND71 665 aaPredicted RBP14.53□□□□□ -0.08
SPG7-209ENST00000564047 UIMC1Q96RL1 719 aa14.53□□□□□ -0.08
SPG7-209ENST00000564047 SDF4Q9BRK5 362 aa14.53□□□□□ -0.08
SPG7-209ENST00000564047 FLRT1Q9NZU1 646 aa14.53□□□□□ -0.08
SPG7-209ENST00000564047 STK24Q9Y6E0 443 aa14.53□□□□□ -0.08
SPG7-209ENST00000564047 LRRC37A2A6NM11 1700 aa14.52□□□□□ -0.08
SPG7-209ENST00000564047 FSD2A1L4K1 749 aa14.52□□□□□ -0.09
SPG7-209ENST00000564047 POTEMA6NI47 508 aa14.52□□□□□ -0.09
SPG7-209ENST00000564047 SLC26A4O43511 780 aa14.52□□□□□ -0.09
SPG7-209ENST00000564047 TXLNAP40222 546 aa14.52□□□□□ -0.09
SPG7-209ENST00000564047 ACVR2BQ13705 512 aa14.52□□□□□ -0.09
SPG7-209ENST00000564047 NEDD9Q14511 834 aa14.52□□□□□ -0.09
SPG7-209ENST00000564047 TTLL4Q14679 1199 aa14.52□□□□□ -0.09
SPG7-209ENST00000564047 SPECC1Q5M775 1068 aa14.52□□□□□ -0.09
SPG7-209ENST00000564047 TAPT1Q6NXT6 567 aa14.52□□□□□ -0.09
SPG7-209ENST00000564047 CCDC62Q6P9F0 684 aa14.52□□□□□ -0.09
SPG7-209ENST00000564047 CCDC73Q6ZRK6 1079 aa14.52□□□□□ -0.09
SPG7-209ENST00000564047 SCFD2Q8WU76 684 aa14.52□□□□□ -0.09
SPG7-209ENST00000564047 SYMPKQ92797 1274 aaKnown RBP14.52□□□□□ -0.09
SPG7-209ENST00000564047 CCSER1Q9C0I3 900 aa14.52□□□□□ -0.09
SPG7-209ENST00000564047 PKD2L1Q9P0L9 805 aa14.52□□□□□ -0.09
SPG7-209ENST00000564047 TCEAL9Q9UHQ7 104 aa14.52□□□□□ -0.09
SPG7-209ENST00000564047 NRBP1Q9UHY1 535 aa14.52□□□□□ -0.09
SPG7-209ENST00000564047 DDX41Q9UJV9 622 aaKnown RBP14.52□□□□□ -0.09
SPG7-209ENST00000564047 HPSEQ9Y251 543 aa14.52□□□□□ -0.09
SPG7-209ENST00000564047 ZNFX1Q9P2E3 1918 aaKnown RBP14.52□□□□□ -0.09
SPG7-209ENST00000564047 A0A1B0GVL5 298 aa14.51□□□□□ -0.09
SPG7-209ENST00000564047 PFKFB1P16118 471 aa14.51□□□□□ -0.09
SPG7-209ENST00000564047 UBA1P22314 1058 aaKnown RBP14.51□□□□□ -0.09
SPG7-209ENST00000564047 UBA7P41226 1012 aa14.51□□□□□ -0.09
SPG7-209ENST00000564047 KRT76Q01546 638 aa14.51□□□□□ -0.09
SPG7-209ENST00000564047 SP2Q02086 613 aa14.51□□□□□ -0.09
SPG7-209ENST00000564047 TPRNQ4KMQ1 711 aa14.51□□□□□ -0.09
SPG7-209ENST00000564047 KRT79Q5XKE5 535 aa14.51□□□□□ -0.09
SPG7-209ENST00000564047 NCAPH2Q6IBW4 605 aa14.51□□□□□ -0.09
SPG7-209ENST00000564047 ZNF746Q6NUN9 644 aaPredicted RBP14.51□□□□□ -0.09
SPG7-209ENST00000564047 USP49Q70CQ1 688 aa14.51□□□□□ -0.09
SPG7-209ENST00000564047 ERMNQ8TAM6 284 aa14.51□□□□□ -0.09
SPG7-209ENST00000564047 GPT2Q8TD30 523 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms