RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 NCOA7Q8NI08 942 aa19.44■□□□□ 0.7
HDGFL3-203ENST00000563404 INPP4AQ96PE3 977 aaPredicted RBP19.44■□□□□ 0.7
HDGFL3-203ENST00000563404 TUT1Q9H6E5 874 aaKnown RBP19.44■□□□□ 0.7
HDGFL3-203ENST00000563404 ERICH2A1L162 156 aa19.43■□□□□ 0.7
HDGFL3-203ENST00000563404 C17orf102A2RUQ5 167 aa19.43■□□□□ 0.7
HDGFL3-203ENST00000563404 RSPH10B2B2RC85 870 aa19.43■□□□□ 0.7
HDGFL3-203ENST00000563404 SPATA31C2B4DYI2 1134 aa19.43■□□□□ 0.7
HDGFL3-203ENST00000563404 SGSM2O43147 1006 aa19.43■□□□□ 0.7
HDGFL3-203ENST00000563404 TREHO43280 583 aa19.43■□□□□ 0.7
HDGFL3-203ENST00000563404 EFCAB14O75071 495 aa19.43■□□□□ 0.7
HDGFL3-203ENST00000563404 RSPH10BP0C881 870 aa19.43■□□□□ 0.7
HDGFL3-203ENST00000563404 ICAM3P32942 547 aa19.43■□□□□ 0.7
HDGFL3-203ENST00000563404 TRAF1Q13077 416 aa19.43■□□□□ 0.7
HDGFL3-203ENST00000563404 RALYLQ86SE5 291 aaKnown RBP19.43■□□□□ 0.7
HDGFL3-203ENST00000563404 RUFY2Q8WXA3 655 aa19.43■□□□□ 0.7
HDGFL3-203ENST00000563404 ATP6V0A1Q93050 837 aa19.43■□□□□ 0.7
HDGFL3-203ENST00000563404 HLA-CQ95604 372 aa19.43■□□□□ 0.7
HDGFL3-203ENST00000563404 TGS1Q96RS0 853 aaKnown RBP19.43■□□□□ 0.7
HDGFL3-203ENST00000563404 RNPEPQ9H4A4 650 aa19.43■□□□□ 0.7
HDGFL3-203ENST00000563404 RTEL1Q9NZ71 1219 aa19.43■□□□□ 0.7
HDGFL3-203ENST00000563404 COL9A3Q14050 684 aaPredicted RBP19.42■□□□□ 0.7
HDGFL3-203ENST00000563404 PLEKHG4Q58EX7 1191 aa19.42■□□□□ 0.7
HDGFL3-203ENST00000563404 CYFIP1Q7L576 1253 aa19.42■□□□□ 0.7
HDGFL3-203ENST00000563404 CATIPQ7Z7H3 387 aa19.42■□□□□ 0.7
HDGFL3-203ENST00000563404 GPR20Q99678 358 aa19.42■□□□□ 0.7
HDGFL3-203ENST00000563404 MYL10Q9BUA6 226 aa19.42■□□□□ 0.7
HDGFL3-203ENST00000563404 LY9Q9HBG7 655 aa19.42■□□□□ 0.7
HDGFL3-203ENST00000563404 LMCD1Q9NZU5 365 aa19.42■□□□□ 0.7
HDGFL3-203ENST00000563404 EMSYQ7Z589 1322 aa19.42■□□□□ 0.7
HDGFL3-203ENST00000563404 SART3Q15020 963 aaKnown RBP19.41■□□□□ 0.7
HDGFL3-203ENST00000563404 USP17L6PQ6QN14 398 aa19.41■□□□□ 0.7
HDGFL3-203ENST00000563404 METTL7BQ6UX53 244 aa19.41■□□□□ 0.7
HDGFL3-203ENST00000563404 TRIM50Q86XT4 487 aa19.41■□□□□ 0.7
HDGFL3-203ENST00000563404 MAP4K1Q92918 833 aa19.41■□□□□ 0.7
HDGFL3-203ENST00000563404 C17orf80Q9BSJ5 609 aa19.41■□□□□ 0.7
HDGFL3-203ENST00000563404 SUPT16HQ9Y5B9 1047 aaKnown RBP19.41■□□□□ 0.7
HDGFL3-203ENST00000563404 DOCK5Q9H7D0 1870 aa19.41■□□□□ 0.7
HDGFL3-203ENST00000563404 MICAL3Q7RTP6 2002 aa19.41■□□□□ 0.7
HDGFL3-203ENST00000563404 SIP14410 1827 aa19.4■□□□□ 0.7
HDGFL3-203ENST00000563404 MEIS2O14770 477 aa19.4■□□□□ 0.7
HDGFL3-203ENST00000563404 STAM2O75886 525 aa19.4■□□□□ 0.7
HDGFL3-203ENST00000563404 CTSHP09668 335 aa19.4■□□□□ 0.7
HDGFL3-203ENST00000563404 HTRA4P83105 476 aaPredicted RBP19.4■□□□□ 0.7
HDGFL3-203ENST00000563404 GNPTABQ3T906 1256 aa19.4■□□□□ 0.7
HDGFL3-203ENST00000563404 MYOCDQ8IZQ8 938 aa19.4■□□□□ 0.7
HDGFL3-203ENST00000563404 SPZ1Q9BXG8 430 aa19.4■□□□□ 0.7
HDGFL3-203ENST00000563404 USP26Q9BXU7 913 aa19.4■□□□□ 0.7
HDGFL3-203ENST00000563404 SETD4Q9NVD3 440 aa19.4■□□□□ 0.7
HDGFL3-203ENST00000563404 INSL6Q9Y581 213 aa19.4■□□□□ 0.7
HDGFL3-203ENST00000563404 NOP56O00567 594 aaKnown RBP19.39■□□□□ 0.69
HDGFL3-203ENST00000563404 FIBPO43427 364 aa19.39■□□□□ 0.69
HDGFL3-203ENST00000563404 AMHP03971 560 aa19.39■□□□□ 0.69
HDGFL3-203ENST00000563404 ADAM17P78536 824 aa19.39■□□□□ 0.69
HDGFL3-203ENST00000563404 NEDD9Q14511 834 aa19.39■□□□□ 0.69
HDGFL3-203ENST00000563404 ZNF654Q8IZM8 581 aa19.39■□□□□ 0.69
HDGFL3-203ENST00000563404 SP7Q8TDD2 431 aaPredicted RBP19.39■□□□□ 0.69
HDGFL3-203ENST00000563404 MAP3K14Q99558 947 aa19.39■□□□□ 0.69
HDGFL3-203ENST00000563404 RBM8AQ9Y5S9 174 aaKnown RBP19.39■□□□□ 0.69
HDGFL3-203ENST00000563404 BRWD1Q9NSI6 2320 aa19.39■□□□□ 0.69
HDGFL3-203ENST00000563404 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.38■□□□□ 0.69
HDGFL3-203ENST00000563404 PLEKHA8P1O95397 391 aa19.38■□□□□ 0.69
HDGFL3-203ENST00000563404 UTP14CQ5TAP6 766 aaKnown RBP19.38■□□□□ 0.69
HDGFL3-203ENST00000563404 PCNX4Q63HM2 1172 aa19.38■□□□□ 0.69
HDGFL3-203ENST00000563404 SRBD1Q8N5C6 995 aaKnown RBP19.38■□□□□ 0.69
HDGFL3-203ENST00000563404 KHSRPQ92945 711 aaKnown RBP eCLIP19.38■□□□□ 0.69
HDGFL3-203ENST00000563404 EPHX3Q9H6B9 360 aa19.38■□□□□ 0.69
HDGFL3-203ENST00000563404 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.37■□□□□ 0.69
HDGFL3-203ENST00000563404 PIK3CDO00329 1044 aa19.37■□□□□ 0.69
HDGFL3-203ENST00000563404 DDAH1O94760 285 aa19.37■□□□□ 0.69
HDGFL3-203ENST00000563404 SP4Q02446 784 aa19.37■□□□□ 0.69
HDGFL3-203ENST00000563404 CMTR1Q8N1G2 835 aaKnown RBP19.37■□□□□ 0.69
HDGFL3-203ENST00000563404 FBXO22Q8NEZ5 403 aa19.37■□□□□ 0.69
HDGFL3-203ENST00000563404 SMARCC2Q8TAQ2 1214 aa19.37■□□□□ 0.69
HDGFL3-203ENST00000563404 SEPT8Q92599 483 aa19.37■□□□□ 0.69
HDGFL3-203ENST00000563404 TOP1MTQ969P6 601 aa19.37■□□□□ 0.69
HDGFL3-203ENST00000563404 RRP36Q96EU6 259 aaKnown RBP19.37■□□□□ 0.69
HDGFL3-203ENST00000563404 PRC1O43663 620 aa19.36■□□□□ 0.69
HDGFL3-203ENST00000563404 ATP9AO75110 1047 aa19.36■□□□□ 0.69
HDGFL3-203ENST00000563404 CAND2O75155 1236 aa19.36■□□□□ 0.69
HDGFL3-203ENST00000563404 SMARCA1P28370 1054 aa19.36■□□□□ 0.69
HDGFL3-203ENST00000563404 IRX6P78412 446 aaPredicted RBP19.36■□□□□ 0.69
HDGFL3-203ENST00000563404 CTCFLQ8NI51 663 aaPredicted RBP19.36■□□□□ 0.69
HDGFL3-203ENST00000563404 LMBR1Q8WVP7 490 aa19.36■□□□□ 0.69
HDGFL3-203ENST00000563404 SENP7Q9BQF6 1050 aa19.36■□□□□ 0.69
HDGFL3-203ENST00000563404 CD320Q9NPF0 282 aa19.36■□□□□ 0.69
HDGFL3-203ENST00000563404 SH2B2O14492 632 aaPredicted RBP19.35■□□□□ 0.69
HDGFL3-203ENST00000563404 RXRAP19793 462 aa19.35■□□□□ 0.69
HDGFL3-203ENST00000563404 ARHGAP4P98171 946 aa19.35■□□□□ 0.69
HDGFL3-203ENST00000563404 EPC2Q52LR7 807 aa19.35■□□□□ 0.69
HDGFL3-203ENST00000563404 FAM26DQ5JW98 314 aa19.35■□□□□ 0.69
HDGFL3-203ENST00000563404 XRRA1Q6P2D8 792 aa19.35■□□□□ 0.69
HDGFL3-203ENST00000563404 CUL5Q93034 780 aa19.35■□□□□ 0.69
HDGFL3-203ENST00000563404 C1QTNF1Q9BXJ1 281 aa19.35■□□□□ 0.69
HDGFL3-203ENST00000563404 UBE2ZQ9H832 354 aaPredicted RBP19.35■□□□□ 0.69
HDGFL3-203ENST00000563404 UPP2O95045 317 aa19.34■□□□□ 0.69
HDGFL3-203ENST00000563404 GNAT1P11488 350 aa19.34■□□□□ 0.69
HDGFL3-203ENST00000563404 KCNA2P16389 499 aa19.34■□□□□ 0.69
HDGFL3-203ENST00000563404 KIF5BP33176 963 aa19.34■□□□□ 0.69
HDGFL3-203ENST00000563404 CASC1Q6TDU7 716 aa19.34■□□□□ 0.69
HDGFL3-203ENST00000563404 RUFY4Q6ZNE9 571 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms