RNA–Protein interactions for RNA: ENST00000563367.1

NME3-203, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 3

Gene NME3, Length 891 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-203ENST00000563367 CDHR1Q96JP9 859 aa32.33■■■□□ 2.77
NME3-203ENST00000563367 GPR20Q99678 358 aa32.33■■■□□ 2.77
NME3-203ENST00000563367 ALG1Q9BT22 464 aa32.33■■■□□ 2.77
NME3-203ENST00000563367 PKD2L1Q9P0L9 805 aa32.33■■■□□ 2.77
NME3-203ENST00000563367 SZT2Q5T011 3432 aa32.32■■■□□ 2.77
NME3-203ENST00000563367 NOP56O00567 594 aaKnown RBP32.32■■■□□ 2.76
NME3-203ENST00000563367 DTNBO60941 627 aa32.32■■■□□ 2.76
NME3-203ENST00000563367 SUPT20HL2P0C7V6 817 aa32.32■■■□□ 2.76
NME3-203ENST00000563367 GNA11P29992 359 aa32.32■■■□□ 2.76
NME3-203ENST00000563367 KIAA0753Q2KHM9 967 aa32.32■■■□□ 2.76
NME3-203ENST00000563367 CPLX2Q6PUV4 134 aaKnown RBP32.32■■■□□ 2.76
NME3-203ENST00000563367 SESTD1Q86VW0 696 aa32.32■■■□□ 2.76
NME3-203ENST00000563367 REXO1Q8N1G1 1221 aaKnown RBP32.32■■■□□ 2.76
NME3-203ENST00000563367 CCDC148Q8NFR7 591 aa32.32■■■□□ 2.76
NME3-203ENST00000563367 RASGRP4Q8TDF6 673 aa32.32■■■□□ 2.76
NME3-203ENST00000563367 AIFM3Q96NN9 605 aa32.32■■■□□ 2.76
NME3-203ENST00000563367 KATNAL1Q9BW62 490 aa32.32■■■□□ 2.76
NME3-203ENST00000563367 SH3GLB2Q9NR46 395 aa32.32■■■□□ 2.76
NME3-203ENST00000563367 LAMA2P24043 3122 aaKnown RBP32.31■■■□□ 2.76
NME3-203ENST00000563367 DEXIO95424 95 aa32.31■■■□□ 2.76
NME3-203ENST00000563367 LARGE1O95461 756 aa32.31■■■□□ 2.76
NME3-203ENST00000563367 ARHGAP4P98171 946 aa32.31■■■□□ 2.76
NME3-203ENST00000563367 SP4Q02446 784 aa32.31■■■□□ 2.76
NME3-203ENST00000563367 LRIT3Q3SXY7 679 aa32.31■■■□□ 2.76
NME3-203ENST00000563367 GDF6Q6KF10 455 aaPredicted RBP32.31■■■□□ 2.76
NME3-203ENST00000563367 GIMAP8Q8ND71 665 aaPredicted RBP32.31■■■□□ 2.76
NME3-203ENST00000563367 CRYGNQ8WXF5 182 aa32.31■■■□□ 2.76
NME3-203ENST00000563367 LRCH3Q96II8 777 aa32.31■■■□□ 2.76
NME3-203ENST00000563367 CTAGE1Q96RT6 745 aa32.31■■■□□ 2.76
NME3-203ENST00000563367 HDAC6Q9UBN7 1215 aa32.31■■■□□ 2.76
NME3-203ENST00000563367 SCN5AQ14524 2016 aa32.31■■■□□ 2.76
NME3-203ENST00000563367 LGALS2P05162 132 aa32.3■■■□□ 2.76
NME3-203ENST00000563367 CSF2RAP15509 400 aa32.3■■■□□ 2.76
NME3-203ENST00000563367 CEP55Q53EZ4 464 aa32.3■■■□□ 2.76
NME3-203ENST00000563367 WNT8AQ9H1J5 351 aa32.3■■■□□ 2.76
NME3-203ENST00000563367 KCNH7Q9NS40 1196 aa32.3■■■□□ 2.76
NME3-203ENST00000563367 MAFGO15525 162 aa32.29■■■□□ 2.76
NME3-203ENST00000563367 ARP10275 920 aa32.29■■■□□ 2.76
NME3-203ENST00000563367 CCL23P55773 120 aa32.29■■■□□ 2.76
NME3-203ENST00000563367 ME3Q16798 604 aa32.29■■■□□ 2.76
NME3-203ENST00000563367 TMEM199Q8N511 208 aa32.29■■■□□ 2.76
NME3-203ENST00000563367 NECAB1Q8N987 351 aa32.29■■■□□ 2.76
NME3-203ENST00000563367 GTF2IRD1Q9UHL9 959 aa32.29■■■□□ 2.76
NME3-203ENST00000563367 MEIS1O00470 390 aa32.28■■■□□ 2.76
NME3-203ENST00000563367 CTDNEP1O95476 244 aa32.28■■■□□ 2.76
NME3-203ENST00000563367 NLRP5P59047 1200 aa32.28■■■□□ 2.76
NME3-203ENST00000563367 PTGISQ16647 500 aa32.28■■■□□ 2.76
NME3-203ENST00000563367 MCTP2Q6DN12 878 aa32.28■■■□□ 2.76
NME3-203ENST00000563367 C16orf59Q7L2K0 433 aa32.28■■■□□ 2.76
NME3-203ENST00000563367 C7orf31Q8N865 590 aa32.28■■■□□ 2.76
NME3-203ENST00000563367 BICD2Q8TD16 824 aa32.28■■■□□ 2.76
NME3-203ENST00000563367 KAT6AQ92794 2004 aa32.27■■■□□ 2.76
NME3-203ENST00000563367 H3BRB1 525 aa32.27■■■□□ 2.76
NME3-203ENST00000563367 CDKL5O76039 1030 aa32.27■■■□□ 2.76
NME3-203ENST00000563367 CYP3A4P08684 503 aa32.27■■■□□ 2.76
NME3-203ENST00000563367 PPIGQ13427 754 aaKnown RBP eCLIP32.27■■■□□ 2.761e-15■□□□□ 10.6
NME3-203ENST00000563367 HIC1Q14526 733 aa32.27■■■□□ 2.76
NME3-203ENST00000563367 KIF2CQ99661 725 aa32.27■■■□□ 2.76
NME3-203ENST00000563367 TUT1Q9H6E5 874 aaKnown RBP32.27■■■□□ 2.76
NME3-203ENST00000563367 FAM86B1E9PN63 330 aa32.26■■■□□ 2.75
NME3-203ENST00000563367 SLC34A2O95436 690 aa32.26■■■□□ 2.75
NME3-203ENST00000563367 FAM86B2P0C5J1 330 aa32.26■■■□□ 2.75
NME3-203ENST00000563367 ZNF76P36508 570 aa32.26■■■□□ 2.75
NME3-203ENST00000563367 UTP14CQ5TAP6 766 aaKnown RBP32.26■■■□□ 2.75
NME3-203ENST00000563367 TRIM50Q86XT4 487 aa32.26■■■□□ 2.75
NME3-203ENST00000563367 AGO4Q9HCK5 861 aaKnown RBP32.26■■■□□ 2.75
NME3-203ENST00000563367 NOD1Q9Y239 953 aa32.26■■■□□ 2.75
NME3-203ENST00000563367 TANC1Q9C0D5 1861 aa32.26■■■□□ 2.75
NME3-203ENST00000563367 GSTTP1A0A1W2PQM5 241 aa32.25■■■□□ 2.75
NME3-203ENST00000563367 ACRP10323 421 aa32.25■■■□□ 2.75
NME3-203ENST00000563367 SCLYQ96I15 445 aa32.25■■■□□ 2.75
NME3-203ENST00000563367 STK36Q9NRP7 1315 aa32.25■■■□□ 2.75
NME3-203ENST00000563367 IGLV3-22A0A075B6J6 115 aa32.24■■■□□ 2.75
NME3-203ENST00000563367 TCF7P36402 384 aaPredicted RBP32.24■■■□□ 2.75
NME3-203ENST00000563367 ZNF200P98182 395 aaPredicted RBP32.24■■■□□ 2.75
NME3-203ENST00000563367 NPY5RQ15761 445 aa32.24■■■□□ 2.75
NME3-203ENST00000563367 NIPA1Q7RTP0 329 aa32.24■■■□□ 2.75
NME3-203ENST00000563367 GTF3C6Q969F1 213 aa32.24■■■□□ 2.75
NME3-203ENST00000563367 BUD13Q9BRD0 619 aaKnown RBP eCLIP32.24■■■□□ 2.758e-10■□□□□ 9.4
NME3-203ENST00000563367 PCDHA4Q9UN74 947 aa32.24■■■□□ 2.75
NME3-203ENST00000563367 ITGB3BPQ13352 177 aaPredicted RBP32.23■■■□□ 2.75
NME3-203ENST00000563367 TMEM240Q5SV17 173 aa32.23■■■□□ 2.75
NME3-203ENST00000563367 DHX38Q92620 1227 aaKnown RBP32.23■■■□□ 2.75
NME3-203ENST00000563367 VWCEQ96DN2 955 aa32.23■■■□□ 2.75
NME3-203ENST00000563367 C22orf23Q9BZE7 217 aa32.23■■■□□ 2.75
NME3-203ENST00000563367 IL23AQ9NPF7 189 aa32.23■■■□□ 2.75
NME3-203ENST00000563367 EDIL3O43854 480 aa32.22■■■□□ 2.75
NME3-203ENST00000563367 PLA2G4DQ86XP0 818 aa32.22■■■□□ 2.75
NME3-203ENST00000563367 SEPT1Q8WYJ6 367 aa32.22■■■□□ 2.75
NME3-203ENST00000563367 JPH1Q9HDC5 661 aaPredicted RBP32.22■■■□□ 2.75
NME3-203ENST00000563367 KCNJ14Q9UNX9 436 aa32.22■■■□□ 2.75
NME3-203ENST00000563367 NFASCO94856 1347 aa32.22■■■□□ 2.75
NME3-203ENST00000563367 M0R2N6 131 aa32.21■■■□□ 2.75
NME3-203ENST00000563367 SMIM10L2AP0DMW4 78 aa32.21■■■□□ 2.75
NME3-203ENST00000563367 SMIM10L2BP0DMW5 78 aa32.21■■■□□ 2.75
NME3-203ENST00000563367 ZNF365Q70YC5 407 aa32.21■■■□□ 2.75
NME3-203ENST00000563367 BLIDQ8IZY5 108 aa32.21■■■□□ 2.75
NME3-203ENST00000563367 RNPC3Q96LT9 517 aaKnown RBP32.21■■■□□ 2.75
NME3-203ENST00000563367 UIMC1Q96RL1 719 aa32.21■■■□□ 2.75
NME3-203ENST00000563367 GJB4Q9NTQ9 266 aa32.21■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms